LOCUS AK075499 3555 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA PSEC0197 fis, clone HEMBA1001490, weakly similar
to PEROXISOMAL-COENZYME A SYNTHETASE (EC 6.-.-.-).
ACCESSION AK075499
VERSION AK075499.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3555)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (20-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Nishikawa,T., Suzuki,Y., Kawai-Hio,Y., Hayashi,K.,
Ishii,S., Saito,K., Yamamoto,J., Wakamatsu,A., Nagai,T.,
Nakamura,Y., Nagahari,K., Sugano,S. and Isogai,T.
TITLE HRI human cDNA sequencing project
JOURNAL Unpublished (2002)
REFERENCE 3
AUTHORS Otsuki,T., Ota,T., Nishikawa,T., Hayashi,K., Suzuki,Y.,
Yamamoto,J., Wakamatsu,A., Kimura,K., Sakamoto,K., Hatano,N.,
Kawai,Y., Ishii,S., Saito,K., Kojima,S., Sugiyama,T., Ono,T.,
Okano,K., Yoshikawa,Y., Aotsuka,S., Sasaki,N., Hattori,A.,
Okumura,K., Nagai,K., Sugano,S. and Isogai,T.
TITLE Signal Sequence and Keyword Trap in silico for Selection of
Full-Length Human cDNAs Encoding Secretion or Membrane Proteins
from Oligo-Capped cDNA Libraries
JOURNAL DNA Res. 12, 117-126 (2005)
COMMENT HRI human cDNA sequencing project; cDNA 5'- & 3'-end one pass
sequencing, clone selection and full insert sequencing: Helix
Research Institute (supported by Japan Key Technology Center
etc.); cDNA library construction: Institute of Medical Science,
University of Tokyo, Laboratory of Genome Structure, Human Genome
Center.
FEATURES Location/Qualifiers
source 1..3555
/clone="HEMBA1001490"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000082532"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 271..2001
/codon_start=1
/protein_id="BAC11654.1"
/translation="MLPHVVLTFRRLGCALASCRLAPARHRGSGLLHTAPVARSDRSA
PVFTRALAFGDRIALVDQHGRHTYRELYSRSLRLSQEICRLCGCVGGDLREERVSFLC
ANDASYVVAQWASWMSGGVAVPLYRKHPAAQLEYVICDSQSSVVLASQEYLELLSPVV
RKLGVPLLPLTPAIYTGAVEEPAEVPVPEQGWRNKGAMIIYTSGTTGRPKGVLSTHQN
IRAVVTGLVHKWAWTKDDVILHVLPLHHVHGVVNALLCPLWVGATCVMMPEFSPQQVW
EEFLSSETPRINVFMAVPTIYTKLMEYYDRHFTQPHAQDFLRAVCEEKIRLMVSGSAA
LPLPVLEKWKNITGHTLLERYGMTEIGMALSGPLTTAVRLPGSVGTPLPGVQVRIVSE
NPQREACSYTIHAEGDERGTKVTPGFEEKEGELLVRGPSVFREYWNKPEETKSAFTLD
GWFKTGDTVVFKDGQYWIRGRTSVDIIKTGGYKVSALEVEWHLLAHPSITDVAVIGVP
DMTWGQRVTAVVTLREGHSLSHRELKEWARNVLAPYAVPSELVLVEEIPRNQMGKIDK
KALIRHFHPS"
BASE COUNT 703 a 1134 c 1051 g 667 t
ORIGIN
1 gaccccggcg cgcgcgcggc ggaggacgag gaagagttgt ggcgaggcag atcctgcccc
61 gtggccgcgg ccgtctcgtg tcccaccggc cttccgggtt ccagcgccag gcctggtgcc
121 tgccccagga ggatgagcat ttgcattgcc tgcaccttat cgtgcccttc cacctgctga
181 agcagctgtg cctgccgctc ttgtgaactg cgaacttccc cttacctcct ctctctggct
241 cgggagctgg ctcggccgcc tgtcagtgca atgctgcccc atgtggtgct caccttccgg
301 cgcctgggct gcgccttggc gtcctgccgg ctggcgcctg cgagacacag aggaagtggt
361 cttctgcaca cagccccagt ggcccgctcg gacaggagcg ccccggtgtt cacccgtgcc
421 ctggcctttg gggacagaat cgccctggtt gaccagcacg gccgccacac gtacagggag
481 ctttattccc gcagccttcg cctgtcccag gagatctgca ggctctgcgg gtgtgtcggc
541 ggggacctcc gggaggagag ggtctccttc ctatgcgcta acgatgcctc ctacgtcgtg
601 gcccagtggg cgtcatggat gagtggcggt gtggcagtcc ccctctacag gaagcatccc
661 gcggcccagc tggagtatgt catctgcgac tcccagagct ctgtggtcct tgccagccag
721 gagtacctgg agctcctgag cccggtggtc aggaagctgg gggtcccgct gctgccgctc
781 acaccagcca tctacactgg agcagtagag gaaccggcag aggtcccggt cccagagcag
841 ggatggagga acaagggcgc catgatcatc tacaccagtg ggaccacggg gaggcccaag
901 ggcgtgctga gcacgcacca aaacatcagg gctgtggtga ccgggctggt ccacaagtgg
961 gcatggacca aagacgacgt gatcctccac gtgctcccgc tgcaccacgt ccatggtgtg
1021 gtcaacgcgc tgctctgtcc tctctgggtg ggagccacct gtgtgatgat gcctgagttc
1081 agccctcagc aggtttggga agagttctta agttctgaaa cgccgcggat caatgtcttt
1141 atggcagtgc ctacaatata caccaagctg atggagtact acgacaggca ttttacccag
1201 ccgcacgccc aggatttctt gcgtgcagtt tgtgaagaaa aaattaggct gatggtctca
1261 ggctcagctg ccctgcccct cccagtgctg gagaagtgga agaacatcac gggccacacc
1321 ctgctggagc ggtatggcat gaccgagatc ggcatggctc tgtccgggcc cctgaccact
1381 gccgtgcgcc tgccaggttc cgtggggacc ccactgcctg gagtacaggt gcgcattgtc
1441 tcagaaaacc cacagaggga agcctgctcc tacaccatcc acgcagaggg agacgagagg
1501 gggaccaagg tgaccccagg gtttgaagaa aaggaggggg agctgctggt gaggggaccc
1561 tccgtgtttc gagaatactg gaataaacca gaagaaacta agagtgcatt caccctggat
1621 ggctggttta agacagggga caccgtggtg tttaaggatg gccagtactg gatccgaggc
1681 cggacctcag tggacatcat caagactgga ggctacaagg tcagcgccct ggaggtggag
1741 tggcacctgc tggcccaccc cagcatcaca gatgtggctg tgattggagt tccggatatg
1801 acatggggcc agcgggtcac tgctgtggtg accctccgag aaggacactc actgtcccac
1861 agggagctca aagagtgggc cagaaatgtc ctggccccgt acgcggtgcc ctcggagctg
1921 gtgctggtgg aggagatccc gcggaaccag atgggcaaga ttgacaagaa ggcgctcatc
1981 aggcacttcc acccctcatg acccggctga ctgggactgc gggtctggtg gggagcagca
2041 gacgtcccct tcacaccgag aaccacgggg gcccgtccaa gacctggcct cccttaaacc
2101 tgaacccccc aaatcaggtc acgtagaatc aagaactgtt tgggatgaaa tcaccatgtg
2161 gggtccccag cctcgggcca gttgttgcag ctcaaggaga ccgtccctgg tgtcacctct
2221 gcctggtcac cgccgacctc atctgtgcag cgcggtgcag ccagcccctg gccccacgtg
2281 ctgaggcacc tcccgcccca cagtgccctg cagttgccag gctctccagg gcaggtccca
2341 gaggtttccc acaaaaaaca aagactccac tggaggaaac aagcccctgt cccacgccgt
2401 ctgcacgtgc ctgtgcctca cccagagcca gtgtctccca gcccacatag gaggtctggg
2461 cagccaccca gggggccctc ctgggaggag ctgagggttc acaagcctcc cagaaccagc
2521 cctgtcccat gggttccgtg catttcctgg tgctgctctt ggaggagagc agctcccact
2581 gtggggacac ctgccaccct gcacactact gtgtgtccat cagcatgtgt cacagaaagt
2641 gcgtggacgg atggccccgg agctgctctg ccctgaccct gcctcacccc ccagcgcagg
2701 gactttccag gtcatctcca caccagcccc tcagccggtg aaccctctct cccatcaccg
2761 tctccaccca gacccccacc tgccccatgg cccccatttc atgtctgtgg ctcaccagct
2821 tttccccaga cccagctccg gagcccacag gcgtggccga tgcagaaacc tcaggaaggt
2881 gtgttgtgaa tgttgggtgc acccacgttg catttactta gcggggccaa ttcagatgca
2941 caggggccac atgcagaatc cagaagtttc tggacaattt tcagaagaat aggctgcctc
3001 ctccccacag cctgggggaa gtaacagtca tcgcccagca gtgtctggcc tgaacttacc
3061 cagaacattc tgcccccgga atgcacgtct gaaagagtgg ccagaaacga gtgtgccggg
3121 caggaggcca gccccatctc aggctcacgt gcctctgaca ggagaccagc cccatctcag
3181 actcacatgc ctcgcggaca gttggacgtg gcctggggcc cctgctcact tgagcatgtc
3241 gcccaccaag cttgtctgag gccacagagc agcgtcccag ccctgttttc caggactggt
3301 gggtgcccca gtccacggcc ctgccccacc cgaactcctg cctcacggtg tggccttgtg
3361 catccccatg gcctgacccc gggaacagtc agaggaaggg gtcccgccct cccgccagag
3421 gcctggaccc aagggaacgg cagtcagaga ctacagtcca gacgtttgtg tctaggcctt
3481 gctggtagct aaggaaatgc cttctgttgg gaaaaggtca aatttaacat agcaaaattt
3541 ttacttaatt ccact
//