LOCUS AK074649 2029 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ90168 fis, clone MAMMA1000204, highly similar
to Dysferlin.
ACCESSION AK074649
VERSION AK074649.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2029)
AUTHORS Isogai,T. and Otsuki,T.
TITLE Direct Submission
JOURNAL Submitted (25-MAR-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Isogai,T., Ota,T., Nishikawa,T., Hayashi,K., Otsuki,T.,
Sugiyama,T., Suzuki,Y., Nagai,K., Sugano,S., Ishii,S.,
Kawai-Hio,Y., Saito,K., Yamamoto,J., Wakamatsu,A., Nakamura,Y.,
Kojima,S., Nagahari,K., Masuho,Y., Ono,T., Okano,K., Yoshikawa,Y.,
Aotsuka,S., Sasaki,N., Hattori,A., Okumura,K., Iwayanagi,T. and
Ninomiya,K.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2002)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology; cDNA library construction:
Institute of Medical Science, University of Tokyo, Laboratory of
Genome Structure, Human Genome Center; cDNA 5'- & 3'-end one pass
sequencing and clone selection: Helix Research Institute
(supported by Japan Key Technology Center etc.).
FEATURES Location/Qualifiers
source 1..2029
/clone="MAMMA1000204"
/clone_lib="MAMMA1"
/db_xref="H-InvDB:HIT000081684"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="mammary gland"
CDS 197..1756
/codon_start=1
/note="highly similar to Dysferlin"
/protein_id="BAG51981.1"
/translation="MPPRQFHQLAAQGPQECLVRIYIVRAFGLQPKDPNGKCDPYIKI
SIGKKSVSDQDNYIPCTLEPVFGKMFELTCTLPLEKDLKITLYDYDLLSKDEKIGETV
VDLENRLLSKFGARCGLPQTYCVSGPNQWRDQLRSSQLLHLFCQQHRVKAPVYRTDRV
MFQDKEYSIEEIEAGRIPNPHLGPVEERLALHVLQQQGLVPEHVESRPLYSPLQPDIE
QGKLQMWVDLFPKALGRPGPPFNITPRRARRFFLRCIIWNTRDVILDDLSLTGEKMSD
IYVKGWMIGFEEHKQKTDVHYRSLGGEGNFNWRFIFPFDYLPAEQVCTIAKKDAFWRL
DKTESKIPARVVFQIWDNDKFSFDDFLGSLQLDLNRMPKPAKTAKKCSLDQLDDAFHP
EWFVSLFEQKTVKGWWPCVAEEGEKKILAGKLEMTLEIVAESEHEERPAGQGRDEPNM
NPKLEDPRRPDTSFLWFTSPYKTMKFILWRRFRWAIILFIILFILLLFLAIFIYAFPN
YAAMKLVKPFS"
BASE COUNT 477 a 578 c 534 g 440 t
ORIGIN
1 gaaggatttt gacaccctga aggtctatga cacacagctg gagaatgtgg aggcctttga
61 gggcctgtct gacttttgta acaccttcaa gctgtaccgg ggcaagacgc aggaggagac
121 agaagatcca tctgtgattg gtgaatttaa gggcctcttc aaaatttatc ccctcccaga
181 agacccagcc atccccatgc ccccaagaca gttccaccag ctggccgccc agggacccca
241 ggagtgcttg gtccgtatct acattgtccg agcatttggc ctgcagccca aggaccccaa
301 tggaaagtgt gatccttaca tcaagatctc catagggaag aaatcagtga gtgaccagga
361 taactacatc ccctgcacgc tggagcccgt atttggaaag atgttcgagc tgacctgcac
421 tctgcctctg gagaaggacc taaagatcac tctctatgac tatgacctcc tctccaagga
481 cgaaaagatc ggtgagacgg tcgtcgacct ggagaacagg ctgctgtcca agtttggggc
541 tcgctgtgga ctcccacaga cctactgtgt ctctggaccg aaccagtggc gggaccagct
601 ccgctcctcc cagctcctcc acctcttctg ccagcagcat agagtcaagg cacctgtgta
661 ccggacagac cgtgtaatgt ttcaggataa agaatattcc attgaagaga tagaggctgg
721 caggatccca aacccacacc tgggcccagt ggaggagcgt ctggctctgc atgtgcttca
781 gcagcagggc ctggtcccgg agcacgtgga gtcacggccc ctctacagcc ccctgcagcc
841 agacatcgag caggggaagc tgcagatgtg ggtcgaccta tttccgaagg ccctggggcg
901 gcctggacct cccttcaaca tcaccccacg gagagccaga aggtttttcc tgcgttgtat
961 tatctggaat accagagatg tgatcctgga tgacctgagc ctcacggggg agaagatgag
1021 cgacatttat gtgaaaggtt ggatgattgg ctttgaagaa cacaagcaaa agacagacgt
1081 gcattatcgt tccctgggag gtgaaggcaa cttcaactgg aggttcattt tccccttcga
1141 ctacctgcca gctgagcaag tctgtaccat tgccaagaag gatgccttct ggaggctgga
1201 caagactgag agcaaaatcc cagcacgagt ggtgttccag atctgggaca atgacaagtt
1261 ctcctttgat gattttctgg gctccctgca gctcgatctc aaccgcatgc ccaagccagc
1321 caagacagcc aagaagtgct ccttggacca gctggatgat gctttccacc cagaatggtt
1381 tgtgtccctt tttgagcaga aaacagtgaa gggctggtgg ccctgtgtag cagaagaggg
1441 tgagaagaaa atactggcgg gcaagctgga aatgaccttg gagattgtag cagagagtga
1501 gcatgaggag cggcctgctg gccagggccg ggatgagccc aacatgaacc ctaagcttga
1561 ggacccaagg cgccccgaca cctccttcct gtggtttacc tccccataca agaccatgaa
1621 gttcatcctg tggcggcgtt tccggtgggc catcatcctc ttcatcatcc tcttcatcct
1681 gctgctgttc ctggccatct tcatctacgc cttcccgaac tatgctgcca tgaagctggt
1741 gaagcccttc agctgaggac tctcctgccc tgtagaaggg gccgtggggt cccctccagc
1801 atgggactgg cctgcctcct ccgcccagct cggcgagctc ctccagacct cctaggcctg
1861 attgtcctgc cagggtgggc agacagacag atggaccggc ccacactccc agagttgcta
1921 acatggagct ctgagatcac cccacttcca tcatttcctt ctcccccaac ccaacgcttt
1981 tttggatcag ctcagacata tttcagtata aaacagttgg aaccacaat
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