LOCUS       AK073411                2671 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J033041P20, full insert
            sequence.
ACCESSION   AK073411
VERSION     AK073411.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2671)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2671
                     /clone="J033041P20"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             359..2272
                     /db_xref="Osa1:LOC_Os12g37400"
                     /db_xref="RAP-DB:Os12g0560700"
                     /note="(RAP Annotation release2) Similar to PROLIFERA
                     protein"
                     /note="(Rice Genome Annotation Project) PROLIFERA
                     protein, putative, expressed"
                     /note="mapping to R12-TIGRv4S1-000685R (Chr.12: short
                     arm=22920536, long arm=22925864, direction=reverse) for
                     TIGR Pseudomol ver4"
                     /protein_id="BAG93444.1"
                     /translation="MPESTEAYAVDEDRDILMTQRVDEGADGGADGTDPLQRMPPEIR
                     RFFEVYIKAFSKVTPLTIRQVKASNIGQLVKISGIVTRCSDVKPLMQVAVYTCEECGF
                     EIYQEVTARVFMPLFECPSQRCKLNKAKGNLILQLRASKFLKFQEVKLQELAEHVPKG
                     HIPRSLTVHLRGELTRKVAPGDVVEMSGIFLPMPYYGFRAMRAGLVADTYLESMSITH
                     FKKKYEEYELKGDEQEQIDRLAEDGDIYNKLARSLAPEIFGHEDVKKALLLLLVGAPH
                     RKLTDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQK
                     DPVTNEFVLEGGALVLADMGICAIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTSL
                     NARTAVLAAANPAWGRYDMRRTPAENINLPPALLSRFDLLWLILDRADMETDLEMARH
                     VVHVHQNLESPALGFTPLEPPVLRAYISTARRVVPSVPRELEEYIATAYSSIRQEEAK
                     SNAPHSYTTIRTLLSILRISIALARLRFSETVAQSDVDEALRLMQMSKYSLYSDDRQR
                     SGLDAISDIYSILRDEAARTNSMDVRYAHALNLISRKGYSEAQLKECLEEYASLNVWQ
                     IHPNTFDIHFIDA"
BASE COUNT          718 a          636 c          657 g          660 t
ORIGIN      
        1 ggccatttcc cccaacccct ctgaatttcc ctccctttcc ctctcctccc ctcctcctcc
       61 tcccgcctcc gccgccgccg ccgccgacta cgccatggcc gccaccgcga cgaagaccat
      121 cgacttcgcc gcggagagag cgctcgccaa ggacttcctc gccaacttcg ccggcccgcg
      181 cggcgagccc aagtacctca acatcctcca agatgtcgcg aaccggaaga tccgcgcggt
      241 ccagatcgag ctggacgacc tgttccacta caaggatgcg gatgacgagt tcttgcagag
      301 ggtcacggag aacacgaagc gctacatcgg catattcgcg gacgccatcg acgagctcat
      361 gccggagtcc accgaggcgt acgccgtcga cgaggacagg gacatcttga tgacgcagcg
      421 cgtcgacgag ggagccgatg gcggcgcaga cggcactgac cccctgcaga ggatgccgcc
      481 ggagatcagg cggttctttg aggtgtacat caaggctttc tcaaaggtga ctccactcac
      541 cattaggcaa gtgaaggcat ccaacatcgg gcagcttgtc aaaatatctg gaatcgtgac
      601 tcgctgctcg gatgtgaagc ccttgatgca agttgctgtt tatacatgtg aagaatgtgg
      661 ttttgagata taccaggaag tgactgctag agtatttatg cctctctttg aatgcccatc
      721 tcaaaggtgc aagctgaaca aagccaaagg gaatctaatc cttcaactgc gagcatcaaa
      781 atttctgaaa tttcaagagg tgaaactcca agagttagca gaacatgtac caaagggtca
      841 catcccacgt tctctgactg ttcatcttag aggagagctg actagaaagg ttgcacctgg
      901 agatgtggtt gagatgtcag gcattttcct ccccatgcct tactatggat tccgagccat
      961 gcgtgcagga ttggttgctg atacctactt ggaatcaatg tctatcaccc atttcaagaa
     1021 aaaatatgaa gaatatgaac ttaaaggtga tgaacaagaa caaattgacc gtttggctga
     1081 ggatggtgat atctacaata agttggcaag gtctttggca cctgaaatat ttggacatga
     1141 agatgtcaag aaagcactgc tgttgctact tgttggcgca cctcatcgga agcttacaga
     1201 tggcatgaag ataagaggag acttgcacat atgcctgatg ggagatcctg gtgttgcaaa
     1261 gagtcaactt ctgaagcata tcatcaatgt tgctccaaga ggagtgtata ccacagggcg
     1321 tggaagcagt ggtgttggtc ttactgctgc cgtccagaaa gatccagtta caaatgagtt
     1381 tgttcttgag ggaggagcac tggtactggc agatatgggt atttgtgcaa tagatgagtt
     1441 tgacaagatg gaagagtcag acaggacagc aatccatgag gtgatggagc agcagactgt
     1501 tagtattgcg aaggctggaa tcaccacctc cctcaatgca agaacggcag ttttggctgc
     1561 tgcaaatcca gcatggggaa ggtatgatat gaggaggacc ccagctgaaa acatcaatct
     1621 acctccagca cttctgtctc gttttgacct cctttggttg atcctggatc gcgcggacat
     1681 ggaaaccgat cttgaaatgg caagacatgt tgttcatgta catcaaaacc ttgaatcacc
     1741 agctctgggg ttcacaccac ttgaaccacc agttcttagg gcatacatat ctactgcgag
     1801 aagagttgtt ccttctgttc ctcgagagct tgaggaatac attgcaactg cctattcgag
     1861 catccgccaa gaggaagcaa aatcaaatgc accacactcc tacacaacta tcaggacact
     1921 tttgagcata ctccggattt ctattgcctt ggcaaggctt agattctcag aaaccgtcgc
     1981 tcagagcgat gtcgatgaag cgcttcggct gatgcagatg tcaaagtact ccctatactc
     2041 agatgaccgc cagcggtctg gattggacgc gatttctgac atatattcca ttctgagaga
     2101 tgaagctgca agaactaaca gcatggatgt cagatatgct catgccctta acttgatctc
     2161 cagaaagggt tacagcgagg ctcaactgaa ggaatgcttg gaggagtatg cttccctgaa
     2221 tgtttggcag atccacccca acacctttga tatccatttc atcgacgcgt aatgcaggaa
     2281 gaattgatcg atcgatctcc tctccttcaa agttctaaca tacccatgat gagctcatga
     2341 tggaaaatct agagtttgaa gctccaggaa gttgtgacca tggctaggga agccattgat
     2401 caaggtctaa caaggctgta aaagtactag ggatcttaga taaactataa ttttcaatga
     2461 tgttattctg ggtagatgta gcctgtgaga aatgtattag tagagggagc cattgctatc
     2521 attgtccacc ttgtgagaag cattgtggtt ttttcagcca tattcttgac tcttgttcaa
     2581 cacttgatac tgaagtgtat gtatcatgtt gtgtttagtt gctggcattt atgttctcag
     2641 acagcagcga ttaaaaaaaa cagaaaattt c
//