LOCUS AK073411 2671 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J033041P20, full insert sequence. ACCESSION AK073411 VERSION AK073411.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2671) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2671 /clone="J033041P20" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 359..2272 /db_xref="Osa1:LOC_Os12g37400" /db_xref="RAP-DB:Os12g0560700" /note="(RAP Annotation release2) Similar to PROLIFERA protein" /note="(Rice Genome Annotation Project) PROLIFERA protein, putative, expressed" /note="mapping to R12-TIGRv4S1-000685R (Chr.12: short arm=22920536, long arm=22925864, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG93444.1" /translation="MPESTEAYAVDEDRDILMTQRVDEGADGGADGTDPLQRMPPEIR RFFEVYIKAFSKVTPLTIRQVKASNIGQLVKISGIVTRCSDVKPLMQVAVYTCEECGF EIYQEVTARVFMPLFECPSQRCKLNKAKGNLILQLRASKFLKFQEVKLQELAEHVPKG HIPRSLTVHLRGELTRKVAPGDVVEMSGIFLPMPYYGFRAMRAGLVADTYLESMSITH FKKKYEEYELKGDEQEQIDRLAEDGDIYNKLARSLAPEIFGHEDVKKALLLLLVGAPH RKLTDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQK DPVTNEFVLEGGALVLADMGICAIDEFDKMEESDRTAIHEVMEQQTVSIAKAGITTSL NARTAVLAAANPAWGRYDMRRTPAENINLPPALLSRFDLLWLILDRADMETDLEMARH VVHVHQNLESPALGFTPLEPPVLRAYISTARRVVPSVPRELEEYIATAYSSIRQEEAK SNAPHSYTTIRTLLSILRISIALARLRFSETVAQSDVDEALRLMQMSKYSLYSDDRQR SGLDAISDIYSILRDEAARTNSMDVRYAHALNLISRKGYSEAQLKECLEEYASLNVWQ IHPNTFDIHFIDA" BASE COUNT 718 a 636 c 657 g 660 t ORIGIN 1 ggccatttcc cccaacccct ctgaatttcc ctccctttcc ctctcctccc ctcctcctcc 61 tcccgcctcc gccgccgccg ccgccgacta cgccatggcc gccaccgcga cgaagaccat 121 cgacttcgcc gcggagagag cgctcgccaa ggacttcctc gccaacttcg ccggcccgcg 181 cggcgagccc aagtacctca acatcctcca agatgtcgcg aaccggaaga tccgcgcggt 241 ccagatcgag ctggacgacc tgttccacta caaggatgcg gatgacgagt tcttgcagag 301 ggtcacggag aacacgaagc gctacatcgg catattcgcg gacgccatcg acgagctcat 361 gccggagtcc accgaggcgt acgccgtcga cgaggacagg gacatcttga tgacgcagcg 421 cgtcgacgag ggagccgatg gcggcgcaga cggcactgac cccctgcaga ggatgccgcc 481 ggagatcagg cggttctttg aggtgtacat caaggctttc tcaaaggtga ctccactcac 541 cattaggcaa gtgaaggcat ccaacatcgg gcagcttgtc aaaatatctg gaatcgtgac 601 tcgctgctcg gatgtgaagc ccttgatgca agttgctgtt tatacatgtg aagaatgtgg 661 ttttgagata taccaggaag tgactgctag agtatttatg cctctctttg aatgcccatc 721 tcaaaggtgc aagctgaaca aagccaaagg gaatctaatc cttcaactgc gagcatcaaa 781 atttctgaaa tttcaagagg tgaaactcca agagttagca gaacatgtac caaagggtca 841 catcccacgt tctctgactg ttcatcttag aggagagctg actagaaagg ttgcacctgg 901 agatgtggtt gagatgtcag gcattttcct ccccatgcct tactatggat tccgagccat 961 gcgtgcagga ttggttgctg atacctactt ggaatcaatg tctatcaccc atttcaagaa 1021 aaaatatgaa gaatatgaac ttaaaggtga tgaacaagaa caaattgacc gtttggctga 1081 ggatggtgat atctacaata agttggcaag gtctttggca cctgaaatat ttggacatga 1141 agatgtcaag aaagcactgc tgttgctact tgttggcgca cctcatcgga agcttacaga 1201 tggcatgaag ataagaggag acttgcacat atgcctgatg ggagatcctg gtgttgcaaa 1261 gagtcaactt ctgaagcata tcatcaatgt tgctccaaga ggagtgtata ccacagggcg 1321 tggaagcagt ggtgttggtc ttactgctgc cgtccagaaa gatccagtta caaatgagtt 1381 tgttcttgag ggaggagcac tggtactggc agatatgggt atttgtgcaa tagatgagtt 1441 tgacaagatg gaagagtcag acaggacagc aatccatgag gtgatggagc agcagactgt 1501 tagtattgcg aaggctggaa tcaccacctc cctcaatgca agaacggcag ttttggctgc 1561 tgcaaatcca gcatggggaa ggtatgatat gaggaggacc ccagctgaaa acatcaatct 1621 acctccagca cttctgtctc gttttgacct cctttggttg atcctggatc gcgcggacat 1681 ggaaaccgat cttgaaatgg caagacatgt tgttcatgta catcaaaacc ttgaatcacc 1741 agctctgggg ttcacaccac ttgaaccacc agttcttagg gcatacatat ctactgcgag 1801 aagagttgtt ccttctgttc ctcgagagct tgaggaatac attgcaactg cctattcgag 1861 catccgccaa gaggaagcaa aatcaaatgc accacactcc tacacaacta tcaggacact 1921 tttgagcata ctccggattt ctattgcctt ggcaaggctt agattctcag aaaccgtcgc 1981 tcagagcgat gtcgatgaag cgcttcggct gatgcagatg tcaaagtact ccctatactc 2041 agatgaccgc cagcggtctg gattggacgc gatttctgac atatattcca ttctgagaga 2101 tgaagctgca agaactaaca gcatggatgt cagatatgct catgccctta acttgatctc 2161 cagaaagggt tacagcgagg ctcaactgaa ggaatgcttg gaggagtatg cttccctgaa 2221 tgtttggcag atccacccca acacctttga tatccatttc atcgacgcgt aatgcaggaa 2281 gaattgatcg atcgatctcc tctccttcaa agttctaaca tacccatgat gagctcatga 2341 tggaaaatct agagtttgaa gctccaggaa gttgtgacca tggctaggga agccattgat 2401 caaggtctaa caaggctgta aaagtactag ggatcttaga taaactataa ttttcaatga 2461 tgttattctg ggtagatgta gcctgtgaga aatgtattag tagagggagc cattgctatc 2521 attgtccacc ttgtgagaag cattgtggtt ttttcagcca tattcttgac tcttgttcaa 2581 cacttgatac tgaagtgtat gtatcatgtt gtgtttagtt gctggcattt atgttctcag 2641 acagcagcga ttaaaaaaaa cagaaaattt c //