LOCUS       AK072285                1653 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J023016F09, full insert
            sequence.
ACCESSION   AK072285
VERSION     AK072285.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1653)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1653
                     /clone="J023016F09"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1653
                     /db_xref="Osa1:LOC_Os03g08060"
                     /note="(Rice Genome Annotation Project) elongation factor
                     1-alpha, putative, expressed"
                     /note="mapping to R03-TIGRv4S1-000297F (Chr.3: short
                     arm=4096042, long arm=4098872, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          370 a          441 c          447 g          395 t
ORIGIN      
        1 gaccgtctca tcccagccgc cgccgccgca gcctcctcct ctcgtcttct ccttcgagtt
       61 gttagctccc tccttattca accgtgggta aggagaagac gcacatcaac attgtggtca
      121 ttggccacgt cgactccggc aagtcgacca ccacgggcca tctgatctac aagcttggag
      181 gtatcgacaa gcgtgtgatc gagaggttcg agaaggaagc cgctgagatg aacaagaggt
      241 ccttcaagta cgcgtgggtg ctcgacaagc tcaaggccga gcgtgagaga ggtatcacca
      301 ttgatatcgc cctgtggaag ttcgagacca ccaagtacta ctgcacggtc atcgatgccc
      361 ctggtcaccg tgacttcatc aagaacatga tcacgggtac ctcccaggct gactgtgccg
      421 tgctcatcat tgactccacc actggtggtt ttgaggctgg tatctccaag gatggccaga
      481 cccgtgagca cgctcttctt gctttcactc ttggagtgaa gcagatgatc tgctgctgca
      541 acaagatgga tgccaccact cccaagtact ccaaggcccg ttatgatgaa atcgtgaagg
      601 aagtctcatc ctacctgaag aaggtcggct acaaccctga caagattccc tttgttccca
      661 tctctgggtt tgagggtgac aacatgattg agaggtccac caaccttgac tggtacaagg
      721 gccccacctt gcttgaggct cttgaccaga tcaacgagcc caagaggcca tcagacaagc
      781 ccctacgtct tccccttcag gacgtgtaca agatcggcgg tattggtacc gtgcctgtgg
      841 gtcgtgttga gactggtgtc ctcaagcctg gtatggtggt gacctttggt cccagcggtc
      901 tgaccactga ggtcaagtcg gttgagatgc accacgaggc tctccaggag gctcttcctg
      961 gtgacaacgt tgggttcaac gtgaagaacg ttgccgtgaa ggatctgaag cgtgggtacg
     1021 tggcctctaa ctccaaggat gaccctgcca aggaggctgc cagcttcacc tcccaggtga
     1081 tcatcatgaa ccaccctggg cagatcggca atggctacgc cccagtgctg gactgccaca
     1141 cctcacacat tgccgtcaag tttgctgagc tggtgaccaa gatcgacaga cgatccggca
     1201 aggagctgga gaaggagccc aagttcctca agaacggtga tgctggtatg gttaagatga
     1261 ttcccaccaa gcccatggtt gtggagacct tctctgagta ccctcctctt ggtcgttttg
     1321 ccgtgcgtga catgaggcaa acggtggctg ttggcgtcat caagaacgtg gagaagaagg
     1381 acccaaccgg tgccaaggtg accaaggctg ccgccaagaa gaaatgagca tcgttgaagt
     1441 ggtggttatg ctggctgcat ttgagatatc ttagcgttcg ttaagttttg cccacggcca
     1501 tggcactcgt tgcatggacc gttaatatct gctcgcaatg tgcactatgt tagtcgttta
     1561 aaactcgttt atttctattc ggttaaaaac ttggatgctc tgagtcttat tgttgccctt
     1621 cggttgttgt ggaatgcgag tacttacagt gct
//