LOCUS AK070884 2321 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023068M15, full insert sequence. ACCESSION AK070884 VERSION AK070884.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2321) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2321 /clone="J023068M15" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2321 /db_xref="Osa1:LOC_Os11g07440" /db_xref="RAP-DB:Os11g0175400" /note="(RAP Annotation release2) Plant neutral invertase family protein" /note="(Rice Genome Annotation Project) neutral/alkaline invertase, putative, expressed" /note="mapping to R11-TIGRv4S1-000186R (Chr.11: short arm=3735531, long arm=3739424, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 567 a 546 c 598 g 610 t ORIGIN 1 gggatagtct cctccctcca ccaccaccac ctccttccac gatccctccc cctcttgatc 61 ccatccgccg ccggaggaga tcttgccgtt cttgcgcttg gatctagacc gcaagatcgg 121 tgaacggcga cgctctcatt ggttggttta ttagttggct ggtttctctc tcctcgtcga 181 ttcttctccg gcgaacacgc cgccgccgcc gcttcggatt caaggatctt gcattgcctg 241 tctttccaat ttcacattgg atttactcga actgattcgt gctgaaacaa atttgaccaa 301 gaaaagaaga ggaggtcatc agcaggatga agagggtgtc gtcccacgtc tccatcgcct 361 cggaggcgga gatcaacctc gatctctcgc ggctcctcat cgacaagccg aggctgacgc 421 tggagaggaa gaggtccttc gacgagcagt cgtggagtga gctctcccac cgccagaacg 481 acggcttcga cagcatcatg cactccccgg cgttcccctc gggcttcgac tcgcccttct 541 cgctggggac gctcggtgat ccccacccgc tcgtgaacga ggcgtgggag gctctcagga 601 agtccgtggt gtacttccgg gggcagccgg ttgggacgat tgccgccgtc gaccatgcgt 661 ccgaggaggt gctcaattat gatcaggttt ttgtgcgaga tttttttcca agtgcattgg 721 cttttctaat gaataatgag actgatatag tgaaaaactt cctcttgaaa acactccacc 781 tgcaaagctc ggagaaaatg gtagaccgtt tcaagcttgg agcaggagcg atgcctgcaa 841 gtttcaaggt ggatcgtaat cggaacagaa acactgaaac tttagttgca gattttggtg 901 agagtgcaat tgggagggtg gctccagtgg actctggatt ttggtggatt attctactcc 961 gggcatatac aaagtatacg gcagatacta gtttggcaga atcaccagag tgtcagaact 1021 gcatgaggct gatactgaac ctatgcttat ctgagggatt tgataccttc ccaactctgc 1081 tctgcacaga tggctgctca atgatggatc gtcgaatggg tatatatggt tatcctattg 1141 agatccaagc tctattctac atggcgttga gatgtgctct gcagatgctt aagccagatg 1201 gtgaagggaa ggatttcata gaaaagatag ggcaacggct acatgctcta acctaccaca 1261 tgaggaatta cttctggcta gatttcccac acctgaataa catatacaga tataaaacag 1321 aggagtattc acacactgct gtgaacaaat tcaatgtcat cccggattca atccctgact 1381 gggtgtttga tttcatgcca tgccggggag gctacttcct tggcaacgtg agcccagcta 1441 tgatggactt tcggtggttt gcccttggaa attgcattgc cattatatca tctctggcta 1501 ctccagagca atcagtggca ataatggatc tgattgagga gcggtgggaa gagctagttg 1561 gtgagatgcc tctgaagata tgttaccctg caattgagaa ccatgaatgg agaataatca 1621 ctggctgcga cccgaagaac acccggtgga gttatcacaa tggaggatca tggccagttc 1681 tcctgtggct gctgacagca gcctgcatca agactgggcg tccgcagatg gcgaagcgcg 1741 ccattgagct cgccgagtcc aggctactga aggacggctg gccagagtac tacgatggca 1801 agctgggacg gttcatcggc aagcaggcca ggaagttcca gacatggtcc atcgctggct 1861 acctcgtagc ccgtatgatg ctggaggacc cgtcgacgct gatgatgatc tccatggagg 1921 aagaccggcc ggtgaagccg accatgcgac ggtcagcatc atggaatgcc tgaaatgttt 1981 tgatagaatt tttttttccc aaagagaggt tcaatgtgga aacttatagg agttttgtcc 2041 aaacatgaaa atggggttca aaatttactg taactgtact gtcagttagg acagaagtgt 2101 atacgataga tccaagtcgt ttcagagcaa ttttgtccaa cttttcgtat ctggcttcat 2161 caatccaaca gagaagaagt ttttgttggt gaaacatttt tgcaataatt aaacagtttt 2221 gtcttgacat atatactagc atatgtttct gtgatggata attctttgta atactttgta 2281 ggactttctg ttaatatact cctcacatat tttcattgtg g //