LOCUS AK069733 1998 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J023030H12, full insert sequence. ACCESSION AK069733 VERSION AK069733.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1998) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1998 /clone="J023030H12" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 84..1940 /db_xref="Osa1:LOC_Os08g44820" /note="(Rice Genome Annotation Project) no apical meristem protein, expressed" /note="mapping to R08-TIGRv4S1-000930R (Chr.8: short arm=28012990, long arm=28016384, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG91576.1" /translation="MSHPSSSSSSAPPAAAEATSLAPGFRFHPTDEELVSYYLKRKVH GRPLKVDAIAEVDLYKVEPWDLPARSRLRSRDSQWYFFSRLDRKHANRARTNRATAGG YWKTTGKDREVRNGPTTVGMKKTLVFHAGRAPKGERTNWVMHEYRLDGQTTIPPQDSF VVCRIFQKAGPGPQNGAQYGAPFVEEEWEEDDEDVGLLPVEEKDNSDDQEKEISGAME KGYLQMSDLVQNLVDQNENGTIALPVSDNSNNSNHSEDVDGNSGDILSDQNLGSNFLH HVEPVEQNGLVLNENMFSSANAGDLFNISSPNDGFLELKDFADIADLENPLANESTIW PSDGWPWKSTDSMEAVNGASNEFSPLAGEQIFQPEELEQLLQSLQEDSHMGSTISDPP HSSITNLAKPEEDCLMFYDAPFDSSMCDDGFRQLNGFLGSPSTNLSGIDMVDDGMPYY DAMDDNLFNDLLSSVQPSAGSSSHAFSGPVLTQEVNNSTYTYSPTQKVLEPNFVVGAP SSARLPEAGSQLNYVVLPGNITMEKYHRSIIISCSLVLIHHGKRAFSALFGPLIINLF FFAMRNCSLLYLLVLIEQDLSITRSFLWRHSYLAQSVQCYTQLACDFSLPGH" BASE COUNT 498 a 505 c 469 g 526 t ORIGIN 1 ggctgcgttt cgtttcttcc ccaaaaacca agggggaagg caaactttcc ccaaatctca 61 accccaatcc caatctaggg cacatgagcc acccctcgtc gtcgtcctcc tccgctcccc 121 cggcggcggc cgaggccacc tccctcgcac cgggattccg gttccacccg acggatgagg 181 agctggtgtc ctactacctg aagcggaagg tccatgggcg gccgctcaag gtggacgcca 241 tcgcggaggt ggacctgtac aaggtggagc catgggacct ccccgcccgc tcccgcctcc 301 gcagccgcga ctcccagtgg tacttcttca gccgcctcga ccgcaagcac gccaaccgcg 361 cccgcaccaa ccgcgccacc gccggcggct actggaagac caccggcaag gacagggagg 421 tccgcaacgg ccccaccacc gtcggcatga agaagaccct cgtcttccac gccggccgcg 481 cccccaaggg cgagcgcacc aactgggtca tgcacgagta ccgcctcgac ggccaaacca 541 ccatcccacc acaggattca ttcgtcgtgt gccgtatctt ccagaaagcc ggcccaggtc 601 cacagaacgg ggctcagtac ggagctcctt ttgttgagga ggagtgggag gaggatgacg 661 aggatgttgg tttgctaccg gtggaggaga aggacaactc tgatgaccag gaaaaggaaa 721 tttctggtgc tatggagaag ggctatctcc agatgagtga cctcgttcag aacttggttg 781 atcaaaatga gaatggtacc attgccttgc cagtttctga caattcaaac aacagcaacc 841 attctgaaga cgtggatgga aattcagggg acattttaag tgaccaaaac cttgggtcta 901 actttcttca ccatgttgag cctgtggagc aaaatggcct agtgcttaat gaaaatatgt 961 tttctagtgc caatgctgga gaccttttta atatatctag ccccaatgat ggattcctag 1021 aactgaagga ttttgcagat attgcagatt tggagaatcc tttagccaat gaatccacca 1081 tctggccttc tgatggttgg ccctggaaat caactgattc catggaggct gtgaatgggg 1141 ctagcaatga attttctccc ttagctggtg aacagatatt ccagccagaa gaattggaac 1201 agttgttaca gtcactgcaa gaagactctc atatgggttc aactatctct gatcccccac 1261 attcatctat aacaaattta gctaagccag aggaagattg tctaatgttc tatgatgcac 1321 cctttgattc ttcaatgtgt gatgatggtt ttagacagct caatggattt cttggctccc 1381 catcgaccaa tctatctggt attgacatgg tggacgatgg tatgccgtac tatgatgcga 1441 tggatgataa cttgtttaat gatcttctga gctcagtaca gccatcagct ggtagcagtt 1501 cccatgcttt tagtgggcca gtccttactc aagaggtcaa caattcaacc tatacatata 1561 gtccaactca aaaggtttta gaacctaatt ttgtagttgg tgccccatca tctgctaggt 1621 tacctgaagc gggtagtcag ttaaattatg ttgttttacc aggtaatatt actatggaga 1681 agtaccatag gtcaattatt atttcctgct ctttagtgct gatccatcat ggaaaaagag 1741 cattctcagc actttttggg ccactaataa ttaatctttt tttttttgca atgaggaatt 1801 gttcattgtt gtatttactt gtcctgattg agcaagattt aagtattact agatcatttt 1861 tgtggagaca ctcttatctt gctcaatcag tgcagtgtta cacacaattg gcatgtgatt 1921 tctcattgcc tggccattaa cttgtacctg taattgaaca ttattgacaa gtgtttgtac 1981 tatattccac agattccc //