LOCUS       AK068360                2842 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013146O19, full insert
            sequence.
ACCESSION   AK068360
VERSION     AK068360.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2842)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2842
                     /clone="J013146O19"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2842
                     /db_xref="Osa1:LOC_Os02g18820"
                     /db_xref="RAP-DB:Os02g0290300"
                     /note="(RAP Annotation release2) Nitrous oxide reductase,
                     N-terminal domain containing protein"
                     /note="(Rice Genome Annotation Project) nucleotide
                     binding protein, putative, expressed"
                     /note="mapping to R02-TIGRv4S1-000529R (Chr.2: short
                     arm=10972766, long arm=10983602, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          747 a          635 c          633 g          827 t
ORIGIN      
        1 ttccaggcat cccctcgtcg tggtgcatat atatattgaa ggcctgaaat ggctgaacat
       61 tgggcagaag gttcaaagca tgcttctgca caagcatcgt aatctagata tcaagcaaca
      121 tctgcaagat ctaggcaaag gaacatcttc gatctattag ctcagcgaga gatttcccct
      181 cgaacaaaac accaagctaa aaaactttgg agcaaatctc caggaaatga tgctgattcc
      241 aatgaactaa gatatgcagc tacagatgct aaacatgata tatattcatg ggcagaatca
      301 cagtccctgc atcactggtc tgccaaatat tgtcctcttt tgccaccccc caggtctact
      361 atcgcagctg cattcagccc agatgggaaa acacttgcat ctacacatgg tgatcatact
      421 gttaaaataa ttgactatca aactgggaaa tgtttgaaag tgctgagtgg acatcggcgc
      481 acgccttggg tggttagata ccatccatta cttcctgata tccttgctag cggtagtttg
      541 gatcaggaag tccgtctttg ggacgctaaa acctcagact gtattggatc tcaggacttc
      601 catcggccaa ttgcatcaat agcatttcat gcaagggggg agattctggc agttgcatca
      661 ggtcacaaac tgtacatatg gaactacaat aaaagagatg aggctgctgc tccaaccatt
      721 atattaagaa cccgccgctc actaagagct gtccattttc acccccatgg tgctccatat
      781 cttcttactg cagaggttaa taatcttgat tctgcggact caccattgac ccttgcaacc
      841 tcttcgggct attcaaacta tccctcggct gtgttttttg caaatattaa ttccagaaac
      901 tgtccacatc atgaggctaa ttcatcatca ccttgcttgc tttggcctgc atacctcagg
      961 gatgatggaa gtttatgtct gattcgcaat gacttggtta gtagttcaac caatgtgcat
     1021 cagagaccat catctttagc tcaaaatcca ttggcatcag atgttgaaaa tcaacagcct
     1081 gaccaacttg tcacgcctat ggatgtgtgc cctggagaac catctacttc tcatgcttct
     1141 gcatctggtt taagtggagt tgaaatgcag attgacaggg ggcaacctag ctccagatta
     1201 ctgggcagta gctccactag taatcatgag agttctactg ctagagatga tgtgcaaatg
     1261 ccctcactga gcaacagcgt gccgattcca gcaacatctc agccttcaga acatgatggc
     1321 cgtcatggta tgccaatgaa ttcgtttacc acttctagtg gattagatgt tcacatgatc
     1381 ctaagaaatt cagagggtgg aaatcatcat catgatctct tcagtgactc gcgtagctgg
     1441 gagcttccct ttttgcaggg ctggttcatg gcccaaaatc atacaggtgc ttctccatct
     1501 attccgattg atgtcggcag ttctagagga tcaaatcgac atcatgcttc tcgtcgtcat
     1561 gttgtgggct cattacgtgg ggttgggagt tcacttctag gcccccaaat tgatgaagct
     1621 gaggttcatg ctgcatcatt aggtgttgga tctgaactta ctacctcact gcttgctgct
     1681 ggagctgctg aattaccttg cacagtgaag cttagaatat ggcggcatga tatcaaggat
     1741 ccatgtgtta cattggaacc cgaggcatgc cggttgacaa tttctcatgc cgttctctgc
     1801 agtgaaatgg gtgcccattt ttccccttgt ggacgatttc tggtagcatg tgttgcctgt
     1861 ttgctgcctc aaactgaagg cgaccgtggt agccaattgc ctgtgcagta tgattctgca
     1921 ggggccggaa catcaccaac tcgtcaccct ctcccttctc accgagttat ttatgagctc
     1981 cgagtttact ctcttgagga ggcaacgttt ggcaaagttc ttacatcaag agcgataagg
     2041 gcagctcatt gcttaacttc catccagttc tcacccactt cagagcacat actattggca
     2101 tatggtcgtc gtcataactc tatgcttagg agcattgtga tggatgggga aactggaatt
     2161 cctgtatata ctatcttgga ggtctataga gtatcggaca tggagctggt aagagttctt
     2221 cctagtgctg aagatgaagt aaacgttgca tgctttcatc cttcccctgg aggtggtctt
     2281 gtttatggga ccaaggaagg aaagctcagg atcttgcagc acaatggtgc agatatcaca
     2341 agcacagggt tgaattgctt tatcgaggaa aatatgcttg agattcagag atatgcgctg
     2401 gaaggctgaa cgattggttg ccatgtgtta tgtgtacttc tccaggaatt ttcctctgca
     2461 aagtttatca ttgtacaagt gagcctcaag gaaatcatca gatttcagca aagtcatggc
     2521 agattctcaa atgagtttgc tagagtgcct tggggatagg tctgtgcaga gggagttgga
     2581 agatgtaaat caacacaacc atgttgctgc tgtcaagtca tcacgatgct gtaattacag
     2641 aattgtacat gtaatcttta atcaacttaa cttgtatttt agaaagcaca caatgctaac
     2701 ccttttcttt tcaatggcag aggtatttat tgttcccctt gtatttttcg ttgtgtagtc
     2761 ttttattcct tgacggggta ccaaatgcca atgattaaag taactaatca tcaattcatc
     2821 tttggttcaa agatgtactc tg
//