LOCUS AK068360 2842 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013146O19, full insert sequence. ACCESSION AK068360 VERSION AK068360.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2842) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2842 /clone="J013146O19" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2842 /db_xref="Osa1:LOC_Os02g18820" /db_xref="RAP-DB:Os02g0290300" /note="(RAP Annotation release2) Nitrous oxide reductase, N-terminal domain containing protein" /note="(Rice Genome Annotation Project) nucleotide binding protein, putative, expressed" /note="mapping to R02-TIGRv4S1-000529R (Chr.2: short arm=10972766, long arm=10983602, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 747 a 635 c 633 g 827 t ORIGIN 1 ttccaggcat cccctcgtcg tggtgcatat atatattgaa ggcctgaaat ggctgaacat 61 tgggcagaag gttcaaagca tgcttctgca caagcatcgt aatctagata tcaagcaaca 121 tctgcaagat ctaggcaaag gaacatcttc gatctattag ctcagcgaga gatttcccct 181 cgaacaaaac accaagctaa aaaactttgg agcaaatctc caggaaatga tgctgattcc 241 aatgaactaa gatatgcagc tacagatgct aaacatgata tatattcatg ggcagaatca 301 cagtccctgc atcactggtc tgccaaatat tgtcctcttt tgccaccccc caggtctact 361 atcgcagctg cattcagccc agatgggaaa acacttgcat ctacacatgg tgatcatact 421 gttaaaataa ttgactatca aactgggaaa tgtttgaaag tgctgagtgg acatcggcgc 481 acgccttggg tggttagata ccatccatta cttcctgata tccttgctag cggtagtttg 541 gatcaggaag tccgtctttg ggacgctaaa acctcagact gtattggatc tcaggacttc 601 catcggccaa ttgcatcaat agcatttcat gcaagggggg agattctggc agttgcatca 661 ggtcacaaac tgtacatatg gaactacaat aaaagagatg aggctgctgc tccaaccatt 721 atattaagaa cccgccgctc actaagagct gtccattttc acccccatgg tgctccatat 781 cttcttactg cagaggttaa taatcttgat tctgcggact caccattgac ccttgcaacc 841 tcttcgggct attcaaacta tccctcggct gtgttttttg caaatattaa ttccagaaac 901 tgtccacatc atgaggctaa ttcatcatca ccttgcttgc tttggcctgc atacctcagg 961 gatgatggaa gtttatgtct gattcgcaat gacttggtta gtagttcaac caatgtgcat 1021 cagagaccat catctttagc tcaaaatcca ttggcatcag atgttgaaaa tcaacagcct 1081 gaccaacttg tcacgcctat ggatgtgtgc cctggagaac catctacttc tcatgcttct 1141 gcatctggtt taagtggagt tgaaatgcag attgacaggg ggcaacctag ctccagatta 1201 ctgggcagta gctccactag taatcatgag agttctactg ctagagatga tgtgcaaatg 1261 ccctcactga gcaacagcgt gccgattcca gcaacatctc agccttcaga acatgatggc 1321 cgtcatggta tgccaatgaa ttcgtttacc acttctagtg gattagatgt tcacatgatc 1381 ctaagaaatt cagagggtgg aaatcatcat catgatctct tcagtgactc gcgtagctgg 1441 gagcttccct ttttgcaggg ctggttcatg gcccaaaatc atacaggtgc ttctccatct 1501 attccgattg atgtcggcag ttctagagga tcaaatcgac atcatgcttc tcgtcgtcat 1561 gttgtgggct cattacgtgg ggttgggagt tcacttctag gcccccaaat tgatgaagct 1621 gaggttcatg ctgcatcatt aggtgttgga tctgaactta ctacctcact gcttgctgct 1681 ggagctgctg aattaccttg cacagtgaag cttagaatat ggcggcatga tatcaaggat 1741 ccatgtgtta cattggaacc cgaggcatgc cggttgacaa tttctcatgc cgttctctgc 1801 agtgaaatgg gtgcccattt ttccccttgt ggacgatttc tggtagcatg tgttgcctgt 1861 ttgctgcctc aaactgaagg cgaccgtggt agccaattgc ctgtgcagta tgattctgca 1921 ggggccggaa catcaccaac tcgtcaccct ctcccttctc accgagttat ttatgagctc 1981 cgagtttact ctcttgagga ggcaacgttt ggcaaagttc ttacatcaag agcgataagg 2041 gcagctcatt gcttaacttc catccagttc tcacccactt cagagcacat actattggca 2101 tatggtcgtc gtcataactc tatgcttagg agcattgtga tggatgggga aactggaatt 2161 cctgtatata ctatcttgga ggtctataga gtatcggaca tggagctggt aagagttctt 2221 cctagtgctg aagatgaagt aaacgttgca tgctttcatc cttcccctgg aggtggtctt 2281 gtttatggga ccaaggaagg aaagctcagg atcttgcagc acaatggtgc agatatcaca 2341 agcacagggt tgaattgctt tatcgaggaa aatatgcttg agattcagag atatgcgctg 2401 gaaggctgaa cgattggttg ccatgtgtta tgtgtacttc tccaggaatt ttcctctgca 2461 aagtttatca ttgtacaagt gagcctcaag gaaatcatca gatttcagca aagtcatggc 2521 agattctcaa atgagtttgc tagagtgcct tggggatagg tctgtgcaga gggagttgga 2581 agatgtaaat caacacaacc atgttgctgc tgtcaagtca tcacgatgct gtaattacag 2641 aattgtacat gtaatcttta atcaacttaa cttgtatttt agaaagcaca caatgctaac 2701 ccttttcttt tcaatggcag aggtatttat tgttcccctt gtatttttcg ttgtgtagtc 2761 ttttattcct tgacggggta ccaaatgcca atgattaaag taactaatca tcaattcatc 2821 tttggttcaa agatgtactc tg //