LOCUS AK068099 2365 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013134G20, full insert sequence. ACCESSION AK068099 VERSION AK068099.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2365) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2365 /clone="J013134G20" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2365 /db_xref="Osa1:LOC_Os02g15880" /db_xref="RAP-DB:Os02g0259100" /note="(RAP Annotation release2) Conserved hypothetical protein" /note="(Rice Genome Annotation Project) expressed protein" /note="mapping to R02-TIGRv4S1-000475R (Chr.2: short arm=8984618, long arm=8989568, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 578 a 540 c 607 g 640 t ORIGIN 1 gtcttctcgg ctccattttt ccccatcccg acatcgcatc accgcctctc tctttccccc 61 cccccccccc ccacctcacc tgcgtcctcg ccgctatcgc cgccgccgcc gtcgcagcat 121 cgggatatcc tcccgccgcg agtttgctga gcacagttgc tgaattttag ggttatctgc 181 ttcaagcata agtgggccat tgcttctggc ttttactgaa cgtaactcac ttggccaaat 241 gaaatccatg gtagttggtt attctgaagc atagaattgt tactgctttg tgaacgaata 301 acatctatct atctagagca ctggaagatg gatcatagag atacttctgg gtttgtcagt 361 ggaggttgca aagaatcaac gaactgcatc accctaggat ttctaacttt ttagctttgt 421 taaccattat ttaatctgga agtgaggtta tctggtactt ggcaaaaaaa ttggctgtgt 481 tttgtctcct gagaaattct ctagcaatgg accccagact tgggcggtca gcgtttataa 541 atttctcaaa tccaaatgcc tatgtgggca agttccctgt catctccaca gtcagccatc 601 ctacagcttc tagtcaaatt gatgtgctag ctcattgcag ttcatacaac ctgcctagag 661 ggaccaagag aaagtttgat ggcttgtcac tagggctggg caactcatca agctcagaat 721 ctagcaagca aagcatgggt actggctgca ccatatcttc tgctaagggt agtgatgatg 781 gttcttctat tgatttggat ttgaatcatt ttactctggg caatgaaggt acttccaggc 841 ttgataagcg ggcctgtgat tctaggaggg ctttggataa gcctgaattg aatcttgagc 901 tgtctttgtc atcccagtct gctattactg gtgcagactt cactgcagcg actgaatata 961 atagcccaag tctgcagcca tactatatgg acttagtgcc aacagttgat gaaggatcta 1021 catctgctcg ccgaccatct ggttgtcagg tactgtcttt ccttaataag actgcaaaga 1081 tgagtgaatt ttctccaagg gaggttttcc caggtagctc taaccagagt caaggtccgg 1141 ctccaatgcc aacattgctt caactgccaa aaagtccagt agcctgtact tccggtttat 1201 ctcgtccaca acagcgcagc agtagcacaa aaaactgtac atacccagga tgtatgaaag 1261 gagccagagg ttcttcaggg cgttgcattg ctcatggtgg gggtagaagg tgccaaaaag 1321 atggttgtga caagggggct gagggcaaga caatattttg taaggcccat ggtgggggaa 1381 ggcgctgcga acaccttgga tgcaccaaga gtgctgaagg tcgtactgac ttctgcatag 1441 ctcacggtgg tggccgtcgt tgtagccatg aaggatgcaa aagagcagca agagggaaat 1501 ctggtcgctg tattaaacat ggtggtggca aaaggtgtca acatgcaggc tgtacaaaga 1561 gtgcaagagg ccgtactggc cgctgtgttg gccatggcgg gggcaagaga tgccaatctt 1621 ctggatgtga taagagtgca cagggaagca ctaacttttg caaggcacat ggaggcggca 1681 agcgttgctt gtggggtcac gaaggatctg accatggagc tggtgacact ccttgtgagc 1741 gccttgcaag aggcaagaat ggcctgtgtg tttatcacaa tccgcaggtg gatgaaaatc 1801 gtgtccatgg gggtttcagc gttgtcagcg atgcactttc tcagggagat cgaccttcaa 1861 acactgaaac aagcaggtgc agcattttct cgcatcctat ggaggctcct cgtcgtgtgg 1921 cagctccagc tgacgagggt cgggtgcatg gtggcaacat cctgtcaatg tttgcaaatg 1981 gcatgagttt ggggaagcat cccgccaacc aagcagaggc tagcacctct gcacctcgca 2041 actcaaatcc accaatggca tggtgaccgg taactctgcg gtgcggggca gctggctgta 2101 gagccttgaa ccgccttctg ctctctccat ttcagtaagc atatgcttcg aaccatctga 2161 caagtgcctt ctcttcttaa tccttcgggt gtgaaaacta tggtgtgatt gtgtgaactg 2221 ttgtgtcctg atttgtttag cagtgttgtg aacttgtgat atattattaa tcgtttgtgc 2281 tttgtaaaat gtaataatca cctgtgtgag ataaataaaa gggggaaggt tacacattag 2341 atgctgaatt tcaggtcttg tactg //