LOCUS       AK066792                2264 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013079C13, full insert
            sequence.
ACCESSION   AK066792
VERSION     AK066792.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2264
                     /clone="J013079C13"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2264
                     /db_xref="Osa1:LOC_Os08g04780"
                     /note="(Rice Genome Annotation Project) flowering locus
                     D, putative, expressed"
                     /note="mapping to R08-TIGRv4S1-000119R (Chr.8: short
                     arm=2379408, long arm=2382908, direction=reverse) for
                     TIGR Pseudomol ver4"
BASE COUNT          519 a          569 c          661 g          515 t
ORIGIN      
        1 ggagaaaccc caacctcgtc ggcggcgatg tcgtcgtcgt cgcggcggcc ggcgaggagg
       61 gcggcgttga cggcgaggtc gtcgtacgac gagtagctgg tggacgccga gctggagtcc
      121 tacctcggga acgccaggtc gcggcggatc agccggctgc gccgcctctc cgccgacgag
      181 cggcagcggg agacggagac ggaggcgcta atagcgctct cgctgggctt ccccattgac
      241 gagctgctcc ccgccgagcg gcccctcctg ccggcccccg tcgccgccgc ccccaacgac
      301 tacatcgtcg tccgcaacca catcctcgcc ggcctcgccg ccgcgcgcca gctgctccga
      361 ttcggcctcc gcgtgctcgt cctcgagggc cgcgcccgcc ccggcggccg cgtctacacc
      421 actcatctcg gcggggacca ggccgccgtt gagctcggcg gcagcgtcat caccggcatc
      481 cacaccaacc cgctcggcgt gctcgccagg cagctcggga ttccactcca caaggtgcga
      541 gacagttgcc cgctctacca ccacgacggc cgcaccgtgg acatgaagct ggacaggagc
      601 atggatctgg tgttcaacac gcttctagaa cacgccaccc ggctgcgaga gtatctcaag
      661 aaggcagccg aggggatctc gctaggggaa ggtatagaga ggctgagacg cttttacaag
      721 gtggcgaaaa gcgtcgagga gagggaggtt ctggactggc atttggctaa cctggaattc
      781 tccaatgccg gctgcctatc ggagctctcg ctcgcgcact gggaccagga tgaccagtat
      841 gagatggggg gagaccattg cttcctagcc ggagggaatg cgaggctggt acacgcattg
      901 tgcgatggtg tgccggtgtt gtatgagaag acggtgaagc ggattgagca tggggaggat
      961 ggggtgagca tcaccgtgga aggaggccag gttttcaagg ctgacatggc actctgcact
     1021 gctccacttg gagtgctcaa gagcaggagc atcatttttg aaccggagtt gccagagagg
     1081 aagcttgaag caatccagag gttggggttt gggttgttga acaaagtcgc catggtgttt
     1141 ccccatgtat tttgggatga ggagattgac acatttgggt gtttgaataa ggagaggagc
     1201 aagcgtggcg agttctttct cttctacagc taccacactg tctctggtgg tgcggtactt
     1261 atcgcacttg ttgcgggaga agctgctttg gagtttgaaa aggttgatcc tgctgtagca
     1321 cttcataggg tccttggtat tcttaaaggt atctatggcc ccaaaggtgt tacagtgcct
     1381 gatcccattc aatcatgttg cacaagatgg ggtagtgatc ctctttgctc aggttcatac
     1441 tctcacatca gagttgggtc ttctggcact gactatgata ttctcgctga gagcgtcaat
     1501 gaccggttat tctttgctgg agaagcaaca aatcgtgcat accctgcaac aatgcatgga
     1561 gctttattga gtggactaag ggaagcttcc aagattctcc atgcttcgga aagtagattg
     1621 aattctgatt ataagaagta tgccctgcag aaaagcatca gacttataaa taatgtactg
     1681 gacgaccttt tcatggagcc agatctagaa tgtggaagat tctcgttcgt gttctcctat
     1741 attacacctg aggaggaaca ggctccggga ttggctagga ttacacttga gaagcctttg
     1801 cttctgcctt ccaagaaacg caaagtaaag ggtaatcaga aggatcagga ccctgtggct
     1861 gagaagatag accaagaggt gttttattta tacgccaccg tctcgcaaga gcaagcaact
     1921 gaactattgg aatgcgacaa tgataaaagt aggatagcag ttctatgcaa agatcttggt
     1981 gttaaactaa tgggttacga cagtacatac gatgtatgta gtcatctgat ttctagcatc
     2041 tcgagagctc agaaagccag gaaaaggttg cagggaccga agagcttgaa aaccggactt
     2101 tgatctgtac cgctacttta ttcttgtttg tagaaaagaa ccccatattt tctcttttgg
     2161 tttgggccaa aaactggctc atagattgtt ctctagtgtg caaactttag acgtggggca
     2221 ggaaaaccaa gatcctccct gccatttgta acatggcagt catc
//