LOCUS AK066423 2999 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013061P19, full insert sequence. ACCESSION AK066423 VERSION AK066423.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2999) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2999 /clone="J013061P19" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2999 /db_xref="Osa1:LOC_Os02g58620" /db_xref="RAP-DB:Os02g0833100" /note="(RAP Annotation release2) Conserved hypothetical protein" /note="(Rice Genome Annotation Project) EMB2758, putative, expressed" /note="mapping to R02-TIGRv4S1-001640F (Chr.2: short arm=35819576, long arm=35825448, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 710 a 643 c 611 g 1035 t ORIGIN 1 gatttctgat ttctcctttc tcccctcgag tctgatcctc ccactaccaa cgtccaccgg 61 caccgcaact tgctgtcctc tcctgccggc tggtccagct ccatctctct tcttgctctg 121 cctccccctt caatttaatt gattcctcca tccagatttc gagatcgaga tgaaggcagt 181 gatgatgcac caccatcacg cggcacgccc tgcgcgctgt ccaaggccta tctcttcctc 241 ctcctcctca gccctgttgg gtagcagacc aaccagagtc tcctccccat caaacctgcc 301 aaagttgctc ataaaccggc gacacatcac ccctcttgcc accaatgctc cccatgctgt 361 tgctgaagat gatggcgcca tctcttttgc taatgcaacg ccaacggagc ctcccattga 421 cttgcgtccc gggggtgtca gaaatgagct aattcttcta gctctaccag cagttcttgg 481 ccaagctatt gatccattgg cgcaattgat ggagactgca tatattggta gattaggtat 541 tatggcgctt gcccttcata aagtagctct tgggagtgct gaattatagc catccttact 601 gcatgaaagc aagctgtccc ttcttttgcc attcatcctt ctttttcata tattctgaag 661 gggctctgga gctagcatca gctggtattg gtgtgtcggt ttttaatatc gtgtctaaga 721 ttttcaacat tccactgttg agcattgcaa cctcatttgt ggcagaagac atttccaaga 781 atgctagcaa gcattcaagt tcaggcaaat tggagctgtc atctgtatct tctgcattgg 841 tcttagctgc tggaatcggt acaattgaag cattggcatt gttcctagga tcaggattgt 901 ttcttaaact aatgggcgtg tcacctgcct caccaatgca taaacctgca aaacttttcc 961 tttcattgag agctttggga gcacctgcaa atgtgattat gttagcagtt cagggaatat 1021 ttcgtggatt caaggatact aagactcctg tattttttat aggtttggga aatctttcag 1081 ctgtagtgct tcttccttta cttatttacg tctttcggct tggcataact ggagctgcaa 1141 tttctacagt tgcatcacag tacattatta caattttgct tctccagtct ctaagtaaaa 1201 gagctgttct acttcctcca aggctggacc agttagagtt tagcggatat ctaaaatctg 1261 gtgtcttttt cgttcttcta tctccccctc tctcattata ttcaattgtt gtgcatgcta 1321 aatcagagtt cttacacttt cattgatctc agtgtccgtt cattttgttc attctacaat 1381 gtgcggttaa ctgaagttca gattttctct cccagggggc tttgagttct ttgggttaat 1441 ttgtcaaaat ttccaattct ggatccacta tgcatttaac aatgatacct ttatcgataa 1501 caagttaatt gtaaagtttg gtttttgaaa taactttata tgcaagaaaa aggaaagact 1561 atcgtagagt agatggtgta ggtacggtta ctgctagtat attttacaga tatgttgatc 1621 agcttgtcat tgatagagct ttcattcatg ggccatgccc attctgtcca ctaatgaatg 1681 ggctgttcag ggaacttcta ttctccatat tgtttcgtgg taccatttat atgtagtaaa 1741 atgtgctcaa ttctaggatt tgcaaatatt tgctgtcata ttattggaaa gataatgcat 1801 gtctatgata tgcatcctga gaacctccat gttataattt catacttctt atcttgtttt 1861 tccttttatt gcacttacca ccatctataa ttccatcatc tgtttttgaa atgcttaggt 1921 ggcatgctgt taggaagaac cctctcgatt ttattaacga tgaccatagg gacatcaatg 1981 gctgctcgac aaggcccaac agctatggca gctcatcaga tatgcttaca agtatggctt 2041 gcggtatctt tgcttgcaga tgctttagct gtttctgccc aggcaatgat agcaagctcc 2101 tatgcaatat tggactacaa gagggtccag aagatagcaa tgtttgcttt gcaggtcatg 2161 tgtcatttct ctgttttcta ttgtgaagct ttgtttttca tgtattcata gatgcaatcg 2221 ccctttcttg ttaacataga aaaatggaga ttttcttgca gataggagta gtcagtggat 2281 tagctttatc cgctggcctg tatacctcat tcagtaatat agcaagatta tttaccagtg 2341 accctgtggt cctaatggtt gtcaaatctt gttcattgtt tgtatgtgcc agtcaaccaa 2401 ttaatgctct ggcattcata tttgatggtc tgcattatgg tgtctcagat tttgattatg 2461 tcgctcaagc tacgattgct gttgggataa tgtcatcatt agttttgtta tatgctccat 2521 ctgtttttgg acttgctgga gtttgggctg gtttgacaac acttatggga ttgcgcatgg 2581 cttcgggcat tctcaggctt ctatggaaat caggaccttg gtcatttttg catgaggaac 2641 ccaaaacaga gctagctggt tgaagatgga gcggcaacta agcagtcaat actacggatt 2701 aaatgaacga gcgggtgatt ctgtaggtat ttatgttcaa gtcggtctgc taggagatgc 2761 catttttact tgctaccaac attgttcaat tgctagtgtt attactatgt gtagccgttt 2821 tatttattct aaaggctccc ttgtttcttg tggtggtttt cgtttactgt gtaagccagt 2881 ttgctgctgc gtaaacagct tgataagttt agaaggatag agaatttgcc tttctttaac 2941 ctgagaccac ttcgaattat ttttggagca atgtatacta atactgtatt attcagttc //