LOCUS       AK066423                2999 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:J013061P19, full insert
            sequence.
ACCESSION   AK066423
VERSION     AK066423.1
KEYWORDS    CAP trapper; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 2999)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..2999
                     /clone="J013061P19"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..2999
                     /db_xref="Osa1:LOC_Os02g58620"
                     /db_xref="RAP-DB:Os02g0833100"
                     /note="(RAP Annotation release2) Conserved hypothetical
                     protein"
                     /note="(Rice Genome Annotation Project) EMB2758,
                     putative, expressed"
                     /note="mapping to R02-TIGRv4S1-001640F (Chr.2: short
                     arm=35819576, long arm=35825448, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          710 a          643 c          611 g         1035 t
ORIGIN      
        1 gatttctgat ttctcctttc tcccctcgag tctgatcctc ccactaccaa cgtccaccgg
       61 caccgcaact tgctgtcctc tcctgccggc tggtccagct ccatctctct tcttgctctg
      121 cctccccctt caatttaatt gattcctcca tccagatttc gagatcgaga tgaaggcagt
      181 gatgatgcac caccatcacg cggcacgccc tgcgcgctgt ccaaggccta tctcttcctc
      241 ctcctcctca gccctgttgg gtagcagacc aaccagagtc tcctccccat caaacctgcc
      301 aaagttgctc ataaaccggc gacacatcac ccctcttgcc accaatgctc cccatgctgt
      361 tgctgaagat gatggcgcca tctcttttgc taatgcaacg ccaacggagc ctcccattga
      421 cttgcgtccc gggggtgtca gaaatgagct aattcttcta gctctaccag cagttcttgg
      481 ccaagctatt gatccattgg cgcaattgat ggagactgca tatattggta gattaggtat
      541 tatggcgctt gcccttcata aagtagctct tgggagtgct gaattatagc catccttact
      601 gcatgaaagc aagctgtccc ttcttttgcc attcatcctt ctttttcata tattctgaag
      661 gggctctgga gctagcatca gctggtattg gtgtgtcggt ttttaatatc gtgtctaaga
      721 ttttcaacat tccactgttg agcattgcaa cctcatttgt ggcagaagac atttccaaga
      781 atgctagcaa gcattcaagt tcaggcaaat tggagctgtc atctgtatct tctgcattgg
      841 tcttagctgc tggaatcggt acaattgaag cattggcatt gttcctagga tcaggattgt
      901 ttcttaaact aatgggcgtg tcacctgcct caccaatgca taaacctgca aaacttttcc
      961 tttcattgag agctttggga gcacctgcaa atgtgattat gttagcagtt cagggaatat
     1021 ttcgtggatt caaggatact aagactcctg tattttttat aggtttggga aatctttcag
     1081 ctgtagtgct tcttccttta cttatttacg tctttcggct tggcataact ggagctgcaa
     1141 tttctacagt tgcatcacag tacattatta caattttgct tctccagtct ctaagtaaaa
     1201 gagctgttct acttcctcca aggctggacc agttagagtt tagcggatat ctaaaatctg
     1261 gtgtcttttt cgttcttcta tctccccctc tctcattata ttcaattgtt gtgcatgcta
     1321 aatcagagtt cttacacttt cattgatctc agtgtccgtt cattttgttc attctacaat
     1381 gtgcggttaa ctgaagttca gattttctct cccagggggc tttgagttct ttgggttaat
     1441 ttgtcaaaat ttccaattct ggatccacta tgcatttaac aatgatacct ttatcgataa
     1501 caagttaatt gtaaagtttg gtttttgaaa taactttata tgcaagaaaa aggaaagact
     1561 atcgtagagt agatggtgta ggtacggtta ctgctagtat attttacaga tatgttgatc
     1621 agcttgtcat tgatagagct ttcattcatg ggccatgccc attctgtcca ctaatgaatg
     1681 ggctgttcag ggaacttcta ttctccatat tgtttcgtgg taccatttat atgtagtaaa
     1741 atgtgctcaa ttctaggatt tgcaaatatt tgctgtcata ttattggaaa gataatgcat
     1801 gtctatgata tgcatcctga gaacctccat gttataattt catacttctt atcttgtttt
     1861 tccttttatt gcacttacca ccatctataa ttccatcatc tgtttttgaa atgcttaggt
     1921 ggcatgctgt taggaagaac cctctcgatt ttattaacga tgaccatagg gacatcaatg
     1981 gctgctcgac aaggcccaac agctatggca gctcatcaga tatgcttaca agtatggctt
     2041 gcggtatctt tgcttgcaga tgctttagct gtttctgccc aggcaatgat agcaagctcc
     2101 tatgcaatat tggactacaa gagggtccag aagatagcaa tgtttgcttt gcaggtcatg
     2161 tgtcatttct ctgttttcta ttgtgaagct ttgtttttca tgtattcata gatgcaatcg
     2221 ccctttcttg ttaacataga aaaatggaga ttttcttgca gataggagta gtcagtggat
     2281 tagctttatc cgctggcctg tatacctcat tcagtaatat agcaagatta tttaccagtg
     2341 accctgtggt cctaatggtt gtcaaatctt gttcattgtt tgtatgtgcc agtcaaccaa
     2401 ttaatgctct ggcattcata tttgatggtc tgcattatgg tgtctcagat tttgattatg
     2461 tcgctcaagc tacgattgct gttgggataa tgtcatcatt agttttgtta tatgctccat
     2521 ctgtttttgg acttgctgga gtttgggctg gtttgacaac acttatggga ttgcgcatgg
     2581 cttcgggcat tctcaggctt ctatggaaat caggaccttg gtcatttttg catgaggaac
     2641 ccaaaacaga gctagctggt tgaagatgga gcggcaacta agcagtcaat actacggatt
     2701 aaatgaacga gcgggtgatt ctgtaggtat ttatgttcaa gtcggtctgc taggagatgc
     2761 catttttact tgctaccaac attgttcaat tgctagtgtt attactatgt gtagccgttt
     2821 tatttattct aaaggctccc ttgtttcttg tggtggtttt cgtttactgt gtaagccagt
     2881 ttgctgctgc gtaaacagct tgataagttt agaaggatag agaatttgcc tttctttaac
     2941 ctgagaccac ttcgaattat ttttggagca atgtatacta atactgtatt attcagttc
//