LOCUS AK065294 2830 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:J013002N10, full insert sequence. ACCESSION AK065294 VERSION AK065294.1 KEYWORDS CAP trapper; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 2830) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..2830 /clone="J013002N10" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..2830 /db_xref="Osa1:LOC_Os08g06140" /db_xref="RAP-DB:Os08g0157900" /note="(RAP Annotation release2) Similar to NAM protein" /note="(Rice Genome Annotation Project) ANAC014, putative, expressed" /note="mapping to R08-TIGRv4S1-000155R (Chr.8: short arm=3382685, long arm=3387005, direction=reverse) for TIGR Pseudomol ver4" BASE COUNT 761 a 620 c 764 g 685 t ORIGIN 1 gactccacca ccccacgctt ccttcgccgc taagtatatc cctcccggcg accgcgaatc 61 ggatcttgag agtgagagag aggttggggg aggtggatga gagggcggag atgacggtga 121 tggagctcaa gaagctgccg ctcgggttca ggttccaccc caccgacgag gagctcgtca 181 ggcactacct caaggggaag atcacggggc agatcaggag cgaggccgat gtcatccccg 241 agatcgatgt ctgcaagtgc gagccgtggg atctccctga taagtctctg atccgctccg 301 atgatccgga gtggttcttc ttcgcgccga aggataggaa gtatcccaat gggagcaggt 361 cgaacagggc gacggaggcc gggtactgga aggccaccgg gaaggacagg gtgatcaggt 421 ccaagggtga caagaagaag cagcaagtaa ttggcatgaa gaagacgctc gtgttccacc 481 gggggcgtgc gccgaagggt gagcggactg ggtggatcat gcatgagtac cgcaccaccg 541 agccggagtt tgagtccggt gagcagggag gttacgttct ctaccggctg ttccgaaagc 601 aagaggagaa aattgagcga cccagtccgg atgaagtgga tagaagtgga tactcaccca 661 ctccttctcg ttcaactcct gataacatgg aaccaattga agacggaaat acaccattaa 721 acagggaatc tccagaatct gctctgcatg aaagcccaat tgatttgcct gctctaactg 781 aggctcaagc tgcgccaatt acaaggtggc ttgcagacag aactgataac gcgacaacaa 841 atgaagtaaa catctctcac atgcctcatc atgggcttga tggaggagct aaggctagcc 901 cttcagctgg tgctttccct cagctgattg gttcacaaca gaatatccat gataataatg 961 aattagccac agtttctgca cccatgctac cacatgaaga cttcaataat ttccctctag 1021 gagccattgg taattttgat ggccatatga atcctcgaga tccagtggag gagttcttga 1081 atcaaaccat tgctgatcca gatgagcatt catcaacaac atcaaaggct cagtatgatt 1141 cggacactgg aatcatacca actgagtttg agaaccatgg ggtgatgcag ggtgaattca 1201 tggatgatct gagtgggttg gaaaatttag atttctggcc agatgaccga aatccccagt 1261 tgagtgcact gtatgaggac acaccattgc tgccttatga tagcaccgac caggatgtgc 1321 tctccatgga ctctggtgct gaatccttgc aagatctatt caacagcatg gacgattcaa 1381 acgcgaggaa taatgtatgg ggcaacgaac cattcctcca ggggactgga tttcccatgt 1441 cttggccgtt acagccgaac tccgcatttc caaaccgggg cactgcaaat aggaggctca 1501 tgctacagct atcagaatca ttatctcctg attttgatgt gagcatgact agagatgagt 1561 gtgaagatga ggaaccaggt attgttgtaa cttcgaagta tgtgaatgaa gctcctgagg 1621 agtcaactgc agaaaaggat atgccttctg atggagatga tgctgagcca acgggtatta 1681 ctatcctgag gcgacgccat gctccaactg caagttcgtt ttctgatgga gatgatgctg 1741 agtcaacggg tattaccatc ctaagacagc accaagctcc aaatgcaagc ttgctttctg 1801 atggagatga tgctgagtca acgggtatca ctatcctaag acgacgccaa gctccaactg 1861 ctagctcagc tagttcattt actcaacagg gtgctgcagt gcaaagggtg cggctacaat 1921 caaaccttga tgcagcaccg tgttctagcg ttgatggttc atcaagttgc atcataaatg 1981 aaggtgaaag tgaacgcacc atggagaaac ctgagattga agagaatgca ggaagtacct 2041 tggctgaagg tgggacttgc catgaggatg accagaagga gcatgatgct tcagcagcaa 2101 atgctaaatc tgttctgagg ctgcggaaga cagcagaggg aagcgacaag gagaacaagc 2161 aggaggaaga ggagggtgtt cttgcttcac atgtgagagc accagggaat aagaggggat 2221 tcccatcgta catcatttgg ctggttctct ctgtggctct ggtcctgctt atctcccttg 2281 ggatttatgg atgggtgtaa acagctgctc ccctgatggt cttcaagatg accatgctta 2341 ctggcacagg ctcccaacat tgacctgctg tgctgagtga cctgttgtac atattgcgtc 2401 ttacgccctt gtgtttagac ggcggttgct agacaccctg gagtgtttgt tccccttcca 2461 gcgtgctgcg gcagaagaaa aatccaaaaa caaaaaaaaa aagaggggcg aaaacgaaga 2521 aaaaagaaga ggtagtgaat gaggaaagtt gttgtagatg ttctgtgact taggtgcatg 2581 gtagtattcc ttcctgctgt tattgcagat gttagtagcc acatacccta gttgttcagc 2641 agttgtaagt caggttaggg atatggttac ttttgtctat gtaatgttct gtagcattat 2701 ctgaacctgc tttatcggat gcaatttcgt tttcctttca gtaaatctct gtgctgcaaa 2761 ctgtagttcc tgtgtaagtt ttgatgtgtg aaatgttaat acttctagta ctaatatact 2821 attgatgatg //