LOCUS       AK064395                1726 bp    mRNA    linear   PLN 04-DEC-2008
DEFINITION  Oryza sativa Japonica Group cDNA clone:002-108-G04, full insert
            sequence.
ACCESSION   AK064395
VERSION     AK064395.1
KEYWORDS    oligo-capping; FLI_CDNA.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 1726)
  AUTHORS   Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K.,
            Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W.,
            Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T.,
            Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K.,
            Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M.,
            Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J.,
            Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N.,
            Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H.,
            Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C.,
            Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J.,
            Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T.,
            Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K.,
            Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M.,
            Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C.,
            Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K.,
            Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y.,
            Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M.,
            Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S.,
            Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K.,
            Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A.,
            Yazaki,J., Yokomizo,S. and Yoshimura,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases.
            Contact:Shoshi Kikuchi
            National Institute of Agrobiological Sciences, Department of
            Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2
            Kannondai, Tsukuba, Ibaraki 305-8602, Japan
REFERENCE   2
  AUTHORS   The Rice Full-Length cDNA Consortium, National Institute of
            Agrobiological Sciences Rice Full-Length cDNA Project Team:,
            Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K.,
            Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H.,
            Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K.,
            Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of
            International Science Genome Sequencing & Analysis Group:,
            Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y.,
            Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M.,
            Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S.,
            Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A.,
            Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K.,
            RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T.,
            Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K.,
            Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A.,
            Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K.,
            Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y.
  TITLE     Collection, Mapping, and Annotation of Over 28,000 cDNA Clones
            from japonica Rice
  JOURNAL   Science 301, 376-379 (2003)
COMMENT     This clone is one of the 28K full-length cDNA clones from japonica
            rice.
            URL : http://cdna01.dna.affrc.go.jp/cDNA/
            
            NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K.,
            Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J.,
            Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T.,
            Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T.
            and Yamamoto,M.
            
            FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y.,
            Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M.,
            Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J.,
            Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S.,
            Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S.,
            Yoshimura,A., Matsubara,K. and Murakami,K.
            
            Genome Exploration Research Group in Riken Genomic Sciences Center
            and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K.,
            Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T.,
            Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K.,
            Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y.,
            Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J.,
            Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M.,
            Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M.,
            Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N.,
            Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H.,
            Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T.,
            Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F.,
            Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K.,
            Yasunishi,A. and Hayashizaki,Y.
FEATURES             Location/Qualifiers
     source          1..1726
                     /clone="002-108-G04"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="mRNA"
                     /organism="Oryza sativa Japonica Group"
     misc_feature    1..1726
                     /db_xref="Osa1:LOC_Os09g34250"
                     /db_xref="RAP-DB:Os09g0518200"
                     /note="(RAP Annotation release2)
                     UDP-glucuronosyl/UDP-glucosyltransferase family protein"
                     /note="(Rice Genome Annotation Project) indole-3-acetate
                     beta-glucosyltransferase, putative, expressed"
                     /note="mapping to R09-TIGRv4S1-000658F (Chr.9: short
                     arm=20221694, long arm=20223512, direction=forward) for
                     TIGR Pseudomol ver4"
BASE COUNT          341 a          482 c          576 g          327 t
ORIGIN      
        1 gtgcaagcgt atcacagttc acaaaagcag cacagagcta gtctagtggc agccatggcg
       61 agctcagagc gcggcggcgg cggcggcatc cacgtcgtct tgctcccgta cccgagccaa
      121 ggccacatca atccgatcct ccagttaggc aagcgcctcg ccggccatgg cggcgtccgg
      181 tgcaccctcg ccgtgacgcg gttcatcctc cgccagggcg agccgccgtc cacgggcgcc
      241 gtccacgtcg ccgcctactc cgacggctac gacgccggcg gcttccacga ggccggcagc
      301 gccggcgagt acctgtcccg gctggagtcg cgcgggtcgg acaccatgga cgcgctcctc
      361 cgcgccgagg cggagcaggg ccggccggtg gacgcggtgg tgtacgactc gttcctgagc
      421 tgggcgccgc gcgtggcggc gcgccacggt gcggcgaccg cgtccttctt cacgcaggcg
      481 tgcgcggtga acgcggcgta cgagagcgtg ttcacgggcc gggtcgagct gccgctcgcc
      541 gccgacggcg aggagccgct acggctgccc gggatttccg tcggcctcac gctggacgac
      601 gtgccgacgt tcatggcgaa cacggaggac agcccggcgt acctcgacct cctggtgaac
      661 cagttcaagg gcctggacat ggccgaccat gtcctcgtca actccttcta cgagctccag
      721 ccacaggaag cggagcacat ggcgtcggcg tggcgggcca agacggtggg gctgaccgtg
      781 ccatcggcgt acctcgacaa ccgcctcccg gacgacacgt cgtacggctt ccacctcttc
      841 tcgccgacga cggagacgaa ggcctggctg gaggcgagac caccgcgcac cgtggcgtac
      901 gtctccttcg gcagcgtggc gacgccgagc ccggcgcaga tggccgaggt ggcggagggt
      961 ttgtacaaca ccggcaagcc cttcctcggg tggtgagggc atcggaaacc tccaagatac
     1021 cggaaggctt cgccgccaag gcggcgaagc aagggagagg gctcatcgtg acgtggtgcc
     1081 cgcagctgga ggtgctggca cacccagctg tggggtgctt cgtgacgcac tgcgggtgga
     1141 actcaacgac agaggggttg agtgccggtg taccaatggt ggcggtaccg cagtggtcag
     1201 accagacaat gaatgccaag tacattgagg acgtgtggcg tgttggggtg cgggtgcggc
     1261 ccgacggcga gggggtggtg aggaaggagg agttggagag gtgtgtgagg gaggtgatgg
     1321 aaggggagag gagcaaggag ttcatggaga atgctaatgg ttggaaggag aaggccagaa
     1381 atgccatgtg tgaaggtggc agctccgaca aaaatatcgt cgagttcatc gctaagattg
     1441 gagtggaccg aaaatttaaa tgattgagac aggtggattc gtcggccatt ggtcatgttt
     1501 cctttctcat ttgatttcac tatcatgttt tcagatgcaa taatagtcgt tatctgtcgc
     1561 tctagtcttt ctttttctag tataggatca aatatttgcg atatcttttt cccactatat
     1621 tcaatgaaat gggcacagtc ggatgccgat tcgttaaaaa aatattttac gatatgtata
     1681 gtaaaataat cagtcatcag tcaatgcatt aattgcatag ttgttc
//