LOCUS AK064395 1726 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:002-108-G04, full insert sequence. ACCESSION AK064395 VERSION AK064395.1 KEYWORDS oligo-capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1726) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1726 /clone="002-108-G04" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" misc_feature 1..1726 /db_xref="Osa1:LOC_Os09g34250" /db_xref="RAP-DB:Os09g0518200" /note="(RAP Annotation release2) UDP-glucuronosyl/UDP-glucosyltransferase family protein" /note="(Rice Genome Annotation Project) indole-3-acetate beta-glucosyltransferase, putative, expressed" /note="mapping to R09-TIGRv4S1-000658F (Chr.9: short arm=20221694, long arm=20223512, direction=forward) for TIGR Pseudomol ver4" BASE COUNT 341 a 482 c 576 g 327 t ORIGIN 1 gtgcaagcgt atcacagttc acaaaagcag cacagagcta gtctagtggc agccatggcg 61 agctcagagc gcggcggcgg cggcggcatc cacgtcgtct tgctcccgta cccgagccaa 121 ggccacatca atccgatcct ccagttaggc aagcgcctcg ccggccatgg cggcgtccgg 181 tgcaccctcg ccgtgacgcg gttcatcctc cgccagggcg agccgccgtc cacgggcgcc 241 gtccacgtcg ccgcctactc cgacggctac gacgccggcg gcttccacga ggccggcagc 301 gccggcgagt acctgtcccg gctggagtcg cgcgggtcgg acaccatgga cgcgctcctc 361 cgcgccgagg cggagcaggg ccggccggtg gacgcggtgg tgtacgactc gttcctgagc 421 tgggcgccgc gcgtggcggc gcgccacggt gcggcgaccg cgtccttctt cacgcaggcg 481 tgcgcggtga acgcggcgta cgagagcgtg ttcacgggcc gggtcgagct gccgctcgcc 541 gccgacggcg aggagccgct acggctgccc gggatttccg tcggcctcac gctggacgac 601 gtgccgacgt tcatggcgaa cacggaggac agcccggcgt acctcgacct cctggtgaac 661 cagttcaagg gcctggacat ggccgaccat gtcctcgtca actccttcta cgagctccag 721 ccacaggaag cggagcacat ggcgtcggcg tggcgggcca agacggtggg gctgaccgtg 781 ccatcggcgt acctcgacaa ccgcctcccg gacgacacgt cgtacggctt ccacctcttc 841 tcgccgacga cggagacgaa ggcctggctg gaggcgagac caccgcgcac cgtggcgtac 901 gtctccttcg gcagcgtggc gacgccgagc ccggcgcaga tggccgaggt ggcggagggt 961 ttgtacaaca ccggcaagcc cttcctcggg tggtgagggc atcggaaacc tccaagatac 1021 cggaaggctt cgccgccaag gcggcgaagc aagggagagg gctcatcgtg acgtggtgcc 1081 cgcagctgga ggtgctggca cacccagctg tggggtgctt cgtgacgcac tgcgggtgga 1141 actcaacgac agaggggttg agtgccggtg taccaatggt ggcggtaccg cagtggtcag 1201 accagacaat gaatgccaag tacattgagg acgtgtggcg tgttggggtg cgggtgcggc 1261 ccgacggcga gggggtggtg aggaaggagg agttggagag gtgtgtgagg gaggtgatgg 1321 aaggggagag gagcaaggag ttcatggaga atgctaatgg ttggaaggag aaggccagaa 1381 atgccatgtg tgaaggtggc agctccgaca aaaatatcgt cgagttcatc gctaagattg 1441 gagtggaccg aaaatttaaa tgattgagac aggtggattc gtcggccatt ggtcatgttt 1501 cctttctcat ttgatttcac tatcatgttt tcagatgcaa taatagtcgt tatctgtcgc 1561 tctagtcttt ctttttctag tataggatca aatatttgcg atatcttttt cccactatat 1621 tcaatgaaat gggcacagtc ggatgccgat tcgttaaaaa aatattttac gatatgtata 1681 gtaaaataat cagtcatcag tcaatgcatt aattgcatag ttgttc //