LOCUS AK063987 1589 bp mRNA linear PLN 04-DEC-2008 DEFINITION Oryza sativa Japonica Group cDNA clone:001-124-D11, full insert sequence. ACCESSION AK063987 VERSION AK063987.1 KEYWORDS oligo-capping; FLI_CDNA. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. REFERENCE 1 (bases 1 to 1589) AUTHORS Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Doi,K., Fujimura,T., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayashizaki,Y., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Hotta,I., Iida,J., Iida,Y., Ikeda,R., Imamura,K., Imotani,K., Ishibiki,J., Ishii,Y., Ishikawa,M., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawagashira,N., Kawai,J., Kawamata,M., Kikuchi,S., Kishikawa-Hirozane,T., Kishimoto,N., Kobayashi,M., Kodama,T., Kojima,K., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Kurosaki,T., Kusumegi,T., Li,C., Lu,M., Masuda,H., Matsubara,K., Matsuyama,T., Miura,J., Miyazaki,A., Mizuno,K., Murakami,K., Murata,M., Nagata,T., Nakamura,M., Namiki,T., Narikawa,R., Niikura,J., Nishi,K., Nomura,K., Numasaki,R., Ohneda,E., Ohno,M., Ohtsuki,K., Oka,M., Ooka,H., Osato,N., Ota,Y., Otomo,Y., Ryu,R., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Satoh,K., Shibata,K., Shinagawa,A., Shiraki,T., Shishiki,T., Sogabe,Y., Sugano,S., Sugiyama,A., Suzuki,K., Suzuki,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Tsunoda,Y., Ueda,M., Waki,K., Xie,Q., Yahagi,W., Yamada,H., Yamamoto,M., Yasunishi,A., Yazaki,J., Yokomizo,S. and Yoshimura,A. TITLE Direct Submission JOURNAL Submitted (05-DEC-2001) to the DDBJ/EMBL/GenBank databases. Contact:Shoshi Kikuchi National Institute of Agrobiological Sciences, Department of Molecular Genetics, Head of Laboratory of Gene Expression; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan REFERENCE 2 AUTHORS The Rice Full-Length cDNA Consortium, National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team:, Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T., Foundation of Advancement of International Science Genome Sequencing & Analysis Group:, Otomo,Y., Murakami,K., Iida,Y., Sugano,S., Fujimura,T., Suzuki,Y., Tsunoda,Y., Kurosaki,T., Kodama,T., Masuda,H., Kobayashi,M., Xie,Q., Lu,M., Narikawa,R., Sugiyama,A., Mizuno,K., Yokomizo,S., Niikura,J., Ikeda,R., Ishibiki,J., Kawamata,M., Yoshimura,A., Miura,J., Kusumegi,T., Oka,M., Ryu,R., Ueda,M., Matsubara,K., RIKEN:, Kawai,J., Carninci,P., Adachi,J., Aizawa,K., Arakawa,T., Fukuda,S., Hara,A., Hashidume,W., Hayatsu,N., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kondo,S., Konno,H., Miyazaki,A., Osato,N., Ota,Y., Saito,R., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Yoshino,M. and Hayashizaki,Y. TITLE Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice JOURNAL Science 301, 376-379 (2003) COMMENT This clone is one of the 28K full-length cDNA clones from japonica rice. URL : http://cdna01.dna.affrc.go.jp/cDNA/ NIAS Rice Full-Length cDNA Project Team: Kikuchi,S., Satoh,K., Nagata,T., Kawagashira,N., Doi,K., Kishimoto,N., Yazaki,J., Ishikawa,M., Yamada,H., Ooka,H., Hotta,I., Kojima,K., Namiki,T., Ohneda,E., Yahagi,W., Suzuki,K., Li,C., Ohtsuki,K., Shishiki,T. and Yamamoto,M. FAIS Genome Sequencing & Analysis Group: Otomo,Y., Iida,Y., Fujimura,T., Ikeda,R., Ishibiki,J., Kawamata,M., Kobayashi,M., Kodama,T., Kurosaki,T., Kusumegi,T., Lu,M., Masuda,H., Miura,J., Mizuno,K., Narikawa,R., Niikura,J., Oka,M., Ryu,R., Sugano,S., Sugiyama,A., Suzuki,Y., Tsunoda,Y., Ueda,M., Xie,Q., Yokomizo,S., Yoshimura,A., Matsubara,K. and Murakami,K. Genome Exploration Research Group in Riken Genomic Sciences Center and Genome Science Laboratory in Riken: Adachi,J., Aizawa,K., Akimura,T., Arakawa,T., Carninci,P., Fukuda,S., Hanagaki,T., Hara,A., Hashizume,W., Hayashida,K., Hayatsu,N., Hiramoto,K., Hiraoka,T., Hori,F., Iida,J., Imamura,K., Imotani,K., Ishii,Y., Itoh,M., Kagawa,I., Kanagawa,S., Katoh,H., Kawai,J., Kishikawa-Hirozane,T., Kojima,Y., Kondo,S., Konno,H., Kouda,M., Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Murata,M., Nakamura,M., Nishi,K., Nomura,K., Numasaki,R., Ohno,M., Osato,N., Ota,Y., Saitoh,H., Sakai,C., Sakai,K., Sakazume,N., Sano,H., Sasaki,D., Sato,K., Shibata,K., Shinagawa,A., Shiraki,T., Sogabe,Y., Tagami,M., Tagami-Takeda,Y., Tagawa,A., Takahashi,F., Takaku-Akahira,S., Tanaka,T., Tomaru,A., Toya,T., Waki,K., Yasunishi,A. and Hayashizaki,Y. FEATURES Location/Qualifiers source 1..1589 /clone="001-124-D11" /cultivar="Nipponbare" /db_xref="taxon:39947" /mol_type="mRNA" /organism="Oryza sativa Japonica Group" CDS 212..1225 /db_xref="Osa1:LOC_Os08g01410" /note="(Rice Genome Annotation Project) organic anion transporter, putative, expressed" /note="mapping to R08-TIGRv4S1-000017R (Chr.8: short arm=262385, long arm=265553, direction=reverse) for TIGR Pseudomol ver4" /protein_id="BAG88948.1" /translation="MEEAKMGDVATIRAVLAILQWWGFNVTVIIMNKWIFQKLEFKFP LTVSCVHFICSSIGAYIAIKILKMKPLIEVAPEDRWRRIFPMSFVFCINIVLGNVSLR YIPVSFMQTIKSFTPATTVILQWLVWRKYFEWRIWASLVPIVGGIMLTSITELSFNMF GFCAAMVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILSVPAIVLEGSGVI NWLYTYDSIVPALIIITTSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSW MIFRNPISAMNAVGCAITLVGCTFYGYVRHLISQQSVNSSPRTPRSRMEMLPLVGDKQ EKI" BASE COUNT 387 a 374 c 348 g 480 t ORIGIN 1 aactgaatta gttcgatcga tgcaggcagg caggccttct agttctacaa agatgcctct 61 aatggatcgt tttcctttcc tatcgatggc ttgattgata caaagccggt tttttcactc 121 ctcgggcgtg cgtttcttga caccggccgg attgatctat catccatcca tcgagtcgag 181 tcgagatcga tcttgatctc gatctcgatc gatggaggaa gccaagatgg gagacgttgc 241 caccatccga gccgttctgg cgatcctcca atggtggggc ttcaacgtca ccgtcatcat 301 catgaacaaa tggatcttcc agaaattgga gttcaagttc cctcttactg tctcgtgtgt 361 ccactttata tgctcttcga ttggagctta catcgcaatc aaaattctca agatgaaacc 421 actgattgaa gttgccccag aggatcggtg gagaagaata ttcccaatgt catttgtgtt 481 ctgcataaac attgtactgg gaaatgtcag cctgagatat attccagtct ccttcatgca 541 gaccataaaa tctttcaccc ctgcaacgac agttattctg cagtggttgg tctggaggaa 601 gtatttcgag tggcgcatat gggcttctct ggtaccaata gtgggaggaa tcatgttaac 661 atcaataact gagcttagtt tcaacatgtt tggtttttgt gctgctatgg ttggttgcct 721 ggcaacatct accaagacca tccttgcaga gtctctactc catggataca aatttgatag 781 cattaacact gtgtactaca tggcgccatt tgcaaccatg atactgtcag taccagcgat 841 tgtgctggaa gggagtggcg tcatcaattg gctctacacg tatgattcca tcgtccctgc 901 actgatcatc atcaccacct ccggagtact cgcattttgc ctcaacttct ccatcttcta 961 cgtcatccat tccacaacgg ctgtcacctt taacgtagcc ggcaacctga aagttgctgt 1021 ggctgtgttg gtgtcgtgga tgatcttccg gaacccgatc tccgcgatga acgctgtcgg 1081 gtgcgcaatc acgctcgtcg gctgcacctt ctatggctat gtgaggcatc tcatctcgca 1141 gcagagcgtt aattcgagcc cacgcacgcc gaggagccgg atggagatgc ttcccctcgt 1201 aggagacaag caagagaaga tttaattggc caccaaatta aaacaagttg atactcaaaa 1261 gaggagggaa ttgttggtgc atgatcaata ggaataaagg agcatcatct aacagctttc 1321 aggattaatc ctgaggcact tttgtcatag aaaattattc agagttttca gttgagttgt 1381 tcgtatagag ctaatagaac ttccttcttg tcatctgaac atgctggggt gctcctcagc 1441 tgtatctctc tctctctctc tctttctatt cttttcttcc tttttctcac aggattaaaa 1501 gatttttgtt tgctcgtaac tatgctacta ttgctacaca tttgatcaca cagcattgtt 1561 cagttgacta tagatattat tattatgtt //