LOCUS AK057202 2009 bp mRNA linear HUM 11-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32640 fis, clone SYNOV2001033, highly similar
to U3 small nucleolar RNA-associated protein 6 homolog.
ACCESSION AK057202
VERSION AK057202.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2009)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Suzuki,O., Sasaki,N., Aotsuka,S., Shoji,T., Ichihara,T.,
Shiohata,N., Matsumoto,K., Hirano,M., Sano,S., Nomura,R.,
Yoshikawa,Y., Matsumura,Y., Moriya,S., Chiba,E., Momiyama,H.,
Onogawa,S., Kaeriyama,S., Satoh,N., Matsunawa,H., Takahashi,E.,
Kataoka,R., Kuga,N., Kuroda,A., Satoh,I., Kamata,K., Takami,S.,
Terashima,Y., Watanabe,M., Sugiyama,T., Irie,R., Otsuki,T.,
Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2009
/clone="SYNOV2001033"
/clone_lib="SYNOV2"
/db_xref="H-InvDB:HIT000013816"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="synovial membrane tissue from rheumatioid
arthritis"
CDS 31..1824
/codon_start=1
/note="highly similar to U3 small nucleolar
RNA-associated protein 6 homolog"
/protein_id="BAG51883.1"
/translation="MAEVIQERIEDRLPELEQLERIGLFSHAEIKAIIKKASDLEYKI
QRRTLFKEDFINYVQYEINLLELIRRRRTRIGYSFKKDEIENSIVHRVQGVFQRASAK
WKDDVQLWLSYVAFCKKWATKTRLSKVFSAMLAIHSNKPALWIMAAKWEMEDRLSSES
ARQLFLRALRFHPECPKLYKEYFRMELMHAEKLRKEKEEFEKASMDVENPDYSEEILK
GELAWIIYKNSVSIIKGAEFHVSLLSIAQLFDFAKDLQKEIYDDLQALHTDDPLTWDY
VARRELEIESQTEEQPTTKQAKAVEVGRKEERCCAVYEEAVKTLPTEAMWKCYITFCL
ERFTKKSNSGFLRGKRLERTMTVFRKAHELKLLSECQYKQLSVSLLCYNFLREALEVA
VAGTELFRDSGTMWQLKLQVLIESKSPDIAMLFEEAFVHLKPQVCLPLWISWAEWSEG
AKSQEDTEAVFKKALLAVIGADSVTLKNKYLDWAYRSGGYKKARAVFKSLQESRPFSV
DFFRKMIQFEKEQESCNMANIREYYERALREFGSADSDLWMDYMKEELNHPLGRPENC
GQIYWRAMKMLQGESAEAFVAKHAMHQTGHL"
BASE COUNT 613 a 354 c 514 g 528 t
ORIGIN
1 ctacccgcgg ggttgtagac ctcggacctc atggcagagg taattcagga acgcatagaa
61 gatcggctcc cggaattgga acagctggag cgcattggac tgttcagtca tgcggagatt
121 aaggctatca ttaagaaggc ttccgatcta gagtacaaaa tccagagaag aacccttttc
181 aaggaagact ttatcaatta tgttcaatat gaaattaatc ttttggagct gatccggaga
241 agaagaacac gcattggata ttcatttaag aaggatgaga ttgagaattc tattgtacac
301 cgggtacaag gtgttttcca gcgtgcctca gcaaaatgga aagacgatgt tcaactttgg
361 ctctcctatg tggctttttg taagaagtgg gctactaaaa ctcgacttag caaggtattc
421 tctgccatgt tggcgattca ttccaacaaa ccagctttgt ggattatggc agccaaatgg
481 gaaatggaag atcgattgtc ttcagaaagc gcaaggcaac tatttcttcg cgcactgcgc
541 tttcatccag agtgcccaaa actttataaa gaatacttta ggatggagct gatgcatgct
601 gaaaaactga ggaaggagaa ggaagaattt gaaaaagcca gtatggatgt ggagaatcct
661 gattattctg aagaaatcct taagggcgag ttggcatgga tcatctacaa aaattctgta
721 agcataatta aaggtgcaga atttcacgtg tcactgcttt cgattgcaca gctatttgac
781 tttgccaaag atctacaaaa agagatttat gatgaccttc aggctctaca cacagatgat
841 cctctcactt gggattatgt ggcaaggcga gaattagaga ttgagtcaca gacagaagag
901 cagcctacaa cgaaacaagc caaagcagtg gaggtcggcc ggaaggagga gaggtgctgt
961 gctgtgtatg aagaggcagt gaagactctg ccaacagagg ccatgtggaa gtgttacatc
1021 accttttgct tggaaagatt tactaagaag tcaaatagtg ggttccttag agggaagagg
1081 ttggaaagaa ccatgactgt attcaggaag gcacatgaac tgaagcttct gtcagaatgc
1141 caatacaagc agttgagtgt ttcgttgctg tgttataact tcctgaggga agctctggaa
1201 gtggcagtag ctggaactga attgtttaga gactctggga caatgtggca gctgaagctg
1261 caggtgctga tcgagtcaaa gagccctgac atagccatgc tttttgaaga agcctttgtg
1321 cacctgaaac cccaggtttg tctgccattg tggatttcct gggcagagtg gagtgaaggt
1381 gccaaaagcc aagaagacac tgaggcagtc tttaagaaag ctctcttagc tgtcataggt
1441 gccgactcag taaccctgaa gaataagtac ctggattggg cttatcgaag tggtggctac
1501 aaaaaggcca gagctgtgtt taaaagttta caggagagcc gaccattttc agttgacttt
1561 ttcaggaaaa tgattcagtt tgaaaaggag caagaatcct gcaatatggc gaacataaga
1621 gaatattatg agagagcttt gagagagttt ggatccgcag attctgatct ttggatggat
1681 tatatgaaag aagaattgaa ccaccccctt ggtagacctg agaactgtgg acagatctac
1741 tggcgagcga tgaaaatgtt gcagggagag tcagcagagg catttgtagc taaacatgct
1801 atgcatcaga ctggccattt atgaagatga agaatacagt cagctttgtg aaatagtatt
1861 gcaagcaagc cccgtgggca aatttgtatt gagtccatct gtaatttgct cagtgatggc
1921 agacaagatg gctgtctggt tttgagacac actttaattt tatgttaact tgttaaatct
1981 ttttaaaaat taaaaaattt ttatgattg
//