LOCUS AK056611 2109 bp mRNA linear HUM 03-JUL-2008
DEFINITION Homo sapiens cDNA FLJ32049 fis, clone NTONG2001220, highly similar
to Tumor necrosis factor receptor superfamily member 1A precursor.
ACCESSION AK056611
VERSION AK056611.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2109)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Ninomiya,K., Wagatsuma,M., Kanda,K., Kondo,H., Yokoi,T.,
Kodaira,H., Furuya,T., Takahashi,M., Kikkawa,E., Omura,Y., Abe,K.,
Kamihara,K., Katsuta,N., Sato,K., Tanikawa,M., Yamazaki,M.,
Sugiyama,T., Irie,R., Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S.,
Yamamoto,J., Isono,Y., Kawai-Hio,Y., Saito,K., Nishikawa,T.,
Kimura,K., Yamashita,H., Matsuo,K., Nakamura,Y., Sekine,M.,
Kikuchi,H., Murakawa,K., Kanehori,K., Takahashi-Fujii,A.,
Oshima,A., Sugiyama,A., Kawakami,B., Suzuki,Y., Sugano,S.,
Nagahari,K., Masuho,Y., Nagai,K. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2109
/clone="NTONG2001220"
/clone_lib="NTONG2"
/db_xref="H-InvDB:HIT000013225"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="tongue"
CDS 191..1570
/codon_start=1
/note="highly similar to Tumor necrosis factor receptor
superfamily member 1A precursor"
/protein_id="BAG51763.1"
/translation="MGLSTVPDLLLPLILPQVLLELLVGIYPSGVIGLVPHLGDREKR
DSVCPQGKYIHPQNNSICCTKCHKGTYLYNDCPGPGQDTDCRECESGSFTASENHLRH
CLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYWSENLFQCFNCSLCLNGTVHL
SCQEKQNTVCTCHAGFFLRENECVSCSNCKKSLECTKLCLPQIENVKGTEDSGTTVLL
PLVIFFGLCLLSLLFIGLMYRYQRWKSKLYSIVCGKSTPEKEGELEGTTTKPLAPNPS
FSPTPGFTPTLGFGPVPSSTFTSSSTYTPGDCPNFAAPRREVAPPYQGADPILATALA
SDPIPNPLQKWEDSAHKPQSLDTDDPATLYAVVENVPPLRWKEFVRRLGLSDHEIDRL
ELQNGRCLREAQYSMLATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEALCGPAA
LPPAPSLLR"
BASE COUNT 434 a 632 c 586 g 457 t
ORIGIN
1 agttctggcc tttggggttc aagatcactg ggaccaggcc gtgatctcta tgcccgagtc
61 tcaaccctca actgtcaccc caaggcactt gggacgtcct ggacagaccg agtcccggga
121 agccccagca ctgccgctgc cacactgccc tgagcccaaa tgggggagtg agaggccata
181 gctgtctggc atgggcctct ccaccgtgcc tgacctgctg ctgccactga ttcttcccca
241 ggtgctcctg gagctgttgg tgggaatata cccctcaggg gttattggac tggtccctca
301 cctaggggac agggagaaga gagatagtgt gtgtccccaa ggaaaatata tccaccctca
361 aaataattcg atttgctgta ccaagtgcca caaaggaacc tacttgtaca atgactgtcc
421 aggcccgggg caggatacgg actgcaggga gtgtgagagc ggctccttca ccgcttcaga
481 aaaccacctc agacactgcc tcagctgctc caaatgccga aaggaaatgg gtcaggtgga
541 gatctcttct tgcacagtgg accgggacac cgtgtgtggc tgcaggaaga accagtaccg
601 gcattattgg agtgaaaacc ttttccagtg cttcaattgc agcctctgcc tcaatgggac
661 cgtgcacctc tcctgccagg agaaacagaa caccgtgtgc acctgccatg caggtttctt
721 tctaagagaa aacgagtgtg tctcctgtag taactgtaag aaaagcctgg agtgcacgaa
781 gttgtgccta ccccagattg agaatgttaa gggcactgag gactcaggca ccacagtgct
841 gttgcccctg gtcattttct ttggtctttg ccttttatcc ctcctcttca ttggtttaat
901 gtatcgctac caacggtgga agtccaagct ctactccatt gtttgtggga aatcgacacc
961 tgaaaaagag ggggagcttg aaggaactac tactaagccc ctggccccaa acccaagctt
1021 cagtcccact ccaggcttca cccccaccct gggcttcggt cccgtgccca gttccacctt
1081 cacctccagc tccacctata cccccggtga ctgtcccaac tttgcggctc cccgcagaga
1141 ggtggcacca ccctatcagg gggctgaccc catccttgcg acagccctcg cctccgaccc
1201 catccccaac ccccttcaga agtgggagga cagcgcccac aagccacaga gcctagacac
1261 tgatgacccc gcgacgctgt acgccgtggt ggagaacgtg cccccgttgc gctggaagga
1321 attcgtgcgg cgcctagggc tgagcgacca cgagatcgat cggctggagc tgcagaacgg
1381 gcgctgcctg cgcgaggcgc aatacagcat gctggcgacc tggaggcggc gcacgccgcg
1441 gcgcgaggcc acgctggagc tgctgggacg cgtgctccgc gacatggacc tgctgggctg
1501 cctggaggac atcgaggagg cgctttgcgg ccccgccgcc ctcccgcccg cgcccagtct
1561 tctcagatga ggctgcgccc ctgcgggcag ctctaaggac cgtcctgcga gatcgccttc
1621 caaccccact ttttttctgg aaaggagggg tcctgcaggg gcaagcagga gctagcagcc
1681 gcctacttgg tgctaacccc tcgatgtaca tagcttttct cagctgcctg cgcgccgccg
1741 acagtcagcg ctgtgcgcgc ggagagaggt gcgccgtggg ctcaagagcc tgagtgggtg
1801 gtttgcgagg atgagggacg ctatgcctca tgcccgtttt gggtgtcctc accagcaagg
1861 ctgctcgggg gcccctggtt cgtccctgag cctttttcac agtgcataag cagttttttt
1921 tgtttttgtt ttgttttgtt ttgtttttaa atcaatcatg ttacactaat agaaacttgg
1981 cactcctgtg ccctctgcct ggacaagcac atagcaagct gaactgtcct aaggcagggg
2041 cgagcacgga acaatggggc cttcagctgg agctgtggac ttttgtacat acactaaaat
2101 tctgaagtt
//