LOCUS AK054634 2462 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ30072 fis, clone ASTRO2000417, moderately
similar to Homo sapiens sorting nexin 5 (SNX5) mRNA.
ACCESSION AK054634
VERSION AK054634.1
KEYWORDS FLI_CDNA; oligo capping; fis (full insert sequence).
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2462)
AUTHORS Isogai,T., Otsuki,T. and Sugiyama,T.
TITLE Direct Submission
JOURNAL Submitted (24-OCT-2001) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Helix Research Institute, Genomics Laboratory; 1532-3 Yana,
Kisarazu, Chiba 292-0812, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Ota,T., Suzuki,Y., Nishikawa,T., Otsuki,T., Sugiyama,T., Irie,R.,
Wakamatsu,A., Hayashi,K., Sato,H., Nagai,K., Kimura,K., Makita,H.,
Sekine,M., Obayashi,M., Nishi,T., Shibahara,T., Tanaka,T.,
Ishii,S., Yamamoto,J., Saito,K., Kawai,Y., Isono,Y., Nakamura,Y.,
Nagahari,K., Murakami,K., Yasuda,T., Iwayanagi,T., Wagatsuma,M.,
Shiratori,A., Sudo,H., Hosoiri,T., Kaku,Y., Kodaira,H., Kondo,H.,
Sugawara,M., Takahashi,M., Kanda,K., Yokoi,T., Furuya,T.,
Kikkawa,E., Omura,Y., Abe,K., Kamihara,K., Katsuta,N., Sato,K.,
Tanikawa,M., Yamazaki,M., Ninomiya,K., Ishibashi,T., Yamashita,H.,
Murakawa,K., Fujimori,K., Tanai,H., Kimata,M., Watanabe,M.,
Hiraoka,S., Chiba,Y., Ishida,S., Ono,Y., Takiguchi,S.,
Watanabe,S., Yosida,M., Hotuta,T., Kusano,J., Kanehori,K.,
Takahashi-Fujii,A., Hara,H., Tanase,T., Nomura,Y., Togiya,S.,
Komai,F., Hara,R., Takeuchi,K., Arita,M., Imose,N., Musashino,K.,
Yuuki,H., Oshima,A., Sasaki,N., Aotsuka,S., Yoshikawa,Y.,
Matsunawa,H., Ichihara,T., Shiohata,N., Sano,S., Moriya,S.,
Momiyama,H., Satoh,N., Takami,S., Terashima,Y., Suzuki,O.,
Nakagawa,S., Senoh,A., Mizoguchi,H., Goto,Y., Shimizu,F.,
Wakebe,H., Hishigaki,H., Watanabe,T., Sugiyama,A., Takemoto,M.,
Kawakami,B., Yamazaki,M., Watanabe,K., Kumagai,A., Itakura,S.,
Fukuzumi,Y., Fujimori,Y., Komiyama,M., Tashiro,H., Tanigami,A.,
Fujiwara,T., Ono,T., Yamada,K., Fujii,Y., Ozaki,K., Hirao,M.,
Ohmori,Y., Kawabata,A., Hikiji,T., Kobatake,N., Inagaki,H.,
Ikema,Y., Okamoto,S., Okitani,R., Kawakami,T., Noguchi,S.,
Itoh,T., Shigeta,K., Senba,T., Matsumura,K., Nakajima,Y.,
Mizuno,T., Morinaga,M., Sasaki,M., Togashi,T., Oyama,M., Hata,H.,
Watanabe,M., Komatsu,T., Mizushima-Sugano,J., Satoh,T., Shirai,Y.,
Takahashi,Y., Nakagawa,K., Okumura,K., Nagase,T., Nomura,N.,
Kikuchi,H., Masuho,Y., Yamashita,R., Nakai,K., Yada,T.,
Nakamura,Y., Ohara,O., Isogai,T. and Sugano,S.
TITLE Complete sequencing and characterization of 21,243 full-length
human cDNAs
JOURNAL Nat. Genet. 36, 40-45 (2004)
REFERENCE 3
AUTHORS Oshima,A., Takahashi-Fujii,A., Tanase,T., Imose,N., Takeuchi,K.,
Arita,M., Musashino,K., Yuuki,H., Hara,H., Sugiyama,T., Irie,R.,
Otsuki,T., Sato,H., Wakamatsu,A., Ishii,S., Yamamoto,J., Isono,Y.,
Kawai-Hio,Y., Saito,K., Nishikawa,T., Kimura,K., Yamashita,H.,
Matsuo,K., Nakamura,Y., Sekine,M., Kikuchi,H., Kanda,K.,
Wagatsuma,M., Murakawa,K., Kanehori,K., Sugiyama,A., Kawakami,B.,
Suzuki,Y., Sugano,S., Nagahari,K., Masuho,Y., Nagai,K. and
Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2001)
COMMENT NEDO human cDNA sequencing project supported by Ministry of
Economy, Trade and Industry of Japan; cDNA full insert sequencing:
Research Association for Biotechnology (RAB); cDNA library
construction: Helix Research Institute (HRI) (supported by Japan
Key Technology Center etc.); 5'- & 3'-end one pass sequencing:
RAB, HRI, and Biotechnology Center, National Institute of
Technology and Evaluation; clone selection for full insert
sequencing: RAB and HRI.
FEATURES Location/Qualifiers
source 1..2462
/cell_type="normal astrocytes (NHA5732)"
/clone="ASTRO2000417"
/clone_lib="ASTRO2"
/db_xref="H-InvDB:HIT000011248"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal astrocytes"
/organism="Homo sapiens"
BASE COUNT 766 a 471 c 515 g 710 t
ORIGIN
1 atgtatcatg tgaatcttta atatttgtgg acattaatac aaatctagag tgtgacagaa
61 catctttgaa ttttatattc tcacttaaca aatattggac taggcaaggt gtggatatct
121 ttccagctga aaatctgatc aaggaggcag gcttcttggc tccatgctaa gaatcatcga
181 tgatttgtca tattggccct cttgctggca aaatcttagt ttcttaggca gtggaatgaa
241 acataacaaa acaaaatccc tagaggctag gaacagatag tttgaaagag aagacactgt
301 agcatgtgct gcttaagtac atatcttctg cttttggaat ggaaactagg aagtcattta
361 aatagatatg tgtctttttt atcctatctg tagtaattta tgtgggatat tcaaatagga
421 aaatacaggc tagcactgca tattgtatcc atgtcttaca ttgtatacaa atgactatta
481 gatttaaatg actgttcaac tagccccaat ctaacagatc agagattgtg gagtttcact
541 tctttggact gtgtcttttt cattttggca ctgagtctgc agtcaccata accacttaga
601 aaaaactgta ttttttctgt tctcctggtg ggttctgagt tttagaatct tgccttttgt
661 gttgttcagt catccaggtg ccctttgccc tctgtaagcc attaaacctt ttgaagaggc
721 agctttgctg gtagagtcgt aagtgaaatt tggaccaaaa gtgagtttat gaagactggt
781 gggcaggagc tcaacagctg cagggttgtc ctgcagccag tgtctgatgt gccccagctg
841 ggaagctgat gaatagctga gatctgtatc tgtggacctg aatgttgatc cctcgcttca
901 gattgacata cctgatgcgc tcagtgagag agacaaagtc aaatttacag tgcacacaaa
961 gaccacactg cccacgtttc agagcccaga gttttctgtt acaaggcaac atgaagactt
1021 tgtgtggcta catgacactc ttattgaaac aacagactat gctgggctta ttattccacc
1081 tgctcctacg aagcccgact ttgatggtcc tcgagagaag atgcagaaac tgggagaagg
1141 tgaagggtct atgaccaaag aagaatttgc caagatgaaa caagaactgg aagctgagta
1201 tctcgctgtg tttaagaaga ctgtgtcctc ccatgaagtc tttcttcagc ggctttcttc
1261 tcaccctgtt ctcagtaaag atcgcaactt tcatgttttc ctggaatatg atcaggatct
1321 aagtgttagg cggaaaaata ctaaagagat gtttggtggc ttcttcaaaa gtgtggtgaa
1381 aagtgctgat gaagtccttt ttactggagt taagagcacc ttgttctgtc ccaggagaag
1441 caacttgaac ctttccacac ttggcttcat tttctccttt tctgtaagga gggagattac
1501 tcagttaatt tctaaaataa agtacaagat cagtatttta tcccactctc agaactacac
1561 tgtccagttt ggtcaccaac tacaggtgat agagaagcac ttgacatgca acctagctgg
1621 cacaactaag gaaccaaact ttagatttta tttacatact ggatttcaag gcgttagcac
1681 aaagacaaga atacaaaata acgtttccgt taccgttaga ggaggtagat gacttctttg
1741 agcaagagaa gaacttcctt attaactatt acaataggat caaagattct tgtgtgaaag
1801 ctgacaaaat gaccagatct cataaaaatg ttgccgatga ctatatccac accgcagcct
1861 gcttacatag cctggcttta gaagagccca cagtcatcaa aaagtaccta ttgaaggttg
1921 ctgagctatt tgaaaaacta aggaaagtag agggtcgagt ttcatcagat gaagatttga
1981 agctaacaga gctcctccga tactacatgc tcaacattga agctgctaag gatctcttat
2041 acagacgcac caaagccctc attgactatg agaactcaaa caaagctctg gataaggccc
2101 ggttaaagag caaagacgtc aagttggctg aggcacacca gcaggagtgc tgccagaaat
2161 ttgaacaact ttccgaatct gcaaaagaag aactgataaa tttcaaacgg aagagagtgg
2221 cagcatttag aaagaatcta attgaaatgt ctgaactgga aataaaacat gccaggaaca
2281 atgtctccct tttgcagagc tgtattgact tgttcaagaa taactgatat gccttcactc
2341 agaagaaaag aaatgaatgt gaaagaaagc caagcatcac ttgcacttaa atcattacca
2401 cggaagatat attagcttca actttagttt aaaattatgt gaataaatat tttgatttct
2461 ac
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