LOCUS AK019903 1324 bp mRNA linear HTC 06-OCT-2010
DEFINITION Mus musculus adult male pituitary gland cDNA, RIKEN full-length
enriched library, clone:5330422M15 product:unclassifiable, full
insert sequence.
ACCESSION AK019903
VERSION AK019903.1
KEYWORDS HTC_FLI; HTC; CAP trapper.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1324)
AUTHORS Adachi,J., Aizawa,K., Akahira,S., Akimura,T., Arai,A., Aono,H.,
Arakawa,T., Bono,H., Carninci,P., Fukuda,S., Fukunishi,Y.,
Furuno,M., Hanagaki,T., Hara,A., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Izawa,M.,
Kasukawa,T., Kato,H., Kawai,J., Kojima,Y., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Nishi,K.,
Nomura,K., Numazaki,R., Ohno,M., Okazaki,Y., Okido,T., Owa,C.,
Saito,H., Saito,R., Sakai,C., Sakai,K., Sano,H., Sasaki,D.,
Shibata,K., Shibata,Y., Shinagawa,A., Shiraki,T., Sogabe,Y.,
Suzuki,H., Tagami,M., Tagawa,A., Takahashi,F., Tanaka,T.,
Tejima,Y., Toya,T., Yamamura,T., Yasunishi,A., Yoshida,K.,
Yoshino,M., Muramatsu,M. and Hayashizaki,Y.
TITLE Direct Submission
JOURNAL Submitted (18-AUG-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Yoshihide Hayashizaki
The Institute of Physical and Chemical Research (RIKEN), Omics
Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
URL :http://www.osc.riken.jp/
REFERENCE 2
AUTHORS
CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and
Genome Science Group (Genome Network Project Core Group)
TITLE The Transcriptional Landscape of the Mammalian Genome
JOURNAL Science 309, 1559-1563 (2005)
REFERENCE 3
AUTHORS
CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group
(Genome Network Project Core Group) and the FANTOM Consortium
TITLE Antisense Transcription in the Mammalian Transcriptome
JOURNAL Science 309, 1564-1566 (2005)
REFERENCE 4
AUTHORS
CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research
Group Phase I and II Team
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
REFERENCE 5
AUTHORS
CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the
FANTOM Consortium
TITLE Functional annotation of a full-length mouse cDNA collection
JOURNAL Nature 409, 685-690 (2001)
REFERENCE 6
AUTHORS Carninci,P. and Hayashizaki,Y.
TITLE High-efficiency full-length cDNA cloning
JOURNAL Meth. Enzymol. 303, 19-44 (1999)
REFERENCE 7
AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
TITLE Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes
JOURNAL Genome Res. 10, 1617-1630 (2000)
REFERENCE 8
AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
Inoue,Y., Kira,A. and Hayashizaki,Y.
TITLE RIKEN integrated sequence analysis (RISA) system-384-format
sequencing pipeline with 384 multicapillary sequencer
JOURNAL Genome Res. 10, 1757-1771 (2000)
COMMENT cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Please visit our web site for further details.
URL:http://www.osc.riken.jp/
URL:http://fantom.gsc.riken.jp/
clone information is available at:
http://fantom.gsc.riken.jp/3/db/annotate/
main.cgi?masterid=5330422M15
FEATURES Location/Qualifiers
source 1..1324
/clone="5330422M15"
/clone_lib="RIKEN full-length enriched mouse cDNA library"
/db_xref="FANTOM_DB:5330422M15"
/db_xref="MGI:1910825"
/db_xref="taxon:10090"
/dev_stage="adult"
/mol_type="mRNA"
/organism="Mus musculus"
/sex="male"
/strain="C57BL/6J"
/tissue_type="pituitary gland"
misc_feature 1..1324
/note="putative"
/note="unclassifiable"
BASE COUNT 323 a 305 c 329 g 365 t
ORIGIN
1 acacacacac acacacacac acacgaaggg ttattagtta ttcctcctgt tgctgtgaaa
61 aatctctgac cagcgcaact gaagaaagga aaggtttatt ttagctgcag gcgtaagggt
121 tcaatccatc acggcaggaa ggtgtgagga caggagcatg aagcagctgg tcacagggca
181 tccacagtca gatgtggtga agcagggaat ggtgagtgcg ggtgccgcac tccctttttc
241 cgcccagctg catcgtagaa cagagcaagt tcatacctgt ctgaacgcaa ccacaaaccc
301 atgagcattc tatctatcta acttagcttt tgaggcaggg tctttctgtg taatcctggc
361 tgtcagaaaa tctctgtaga cgaggctggc ctcaaacaaa cttacaggga tctgcctccc
421 gagtgctggg attaaagatg tgtgccactg cacctggctt tatgagcatt ttatttattc
481 taaacccttc cttaaggctt cattgtatgt gtattggtgt tttgcctgta tgtatactct
541 gggcatggct ggtacctaag gaaggtcaga aagaaggcat tagatccccc gggaactgga
601 gttccaggtg ggtgtgagcc accgtgtgtg tgtgtgtgtg tgtgtgtgtg tgnnctggga
661 gttaaacctg ggtcctctgg atgggcagcc agtgctgtca accattgagc catttctcca
721 gcccccatcc atgaacattg aaatgttcac cctatacttc taactgttgg ggtgtctgtt
781 acacaacctg ggaacttcag actgtgtaca actgtgctct cccaagtctg cgttccacct
841 cctctccgcc tgatgccctt cccccactgt gtttgatgcc tttggatatt cattccatta
901 cgaacagtgg ccagccaggt gtggagtcca aactgtcaat agtgataatg caaagtaaag
961 cctttatgtc tggctttgag taaaatgttt cagcagagcc tatgctaagt ttgggtcgat
1021 ccatagaggc tgagaagtat tttgaggctg tttgaactta gagaagaaat gttgtgtctc
1081 tcgaaggtcc gcacttggtg ctacctgaga gcttgccgcc acacaaacct tgatcctaag
1141 acacgcgtgg caaacctgga gttcttcctc ttgatttccg gctagccgtg atcaaagcga
1201 ctgaagttcg tatgggtcat ttgctctctc tggtagcaaa ggaaagaaaa ccaaccttgg
1261 tagttggaac ctttcccaga cctaattaat tttgtctaat gattgaataa acgtaactgg
1321 cgtg
//