LOCUS AK007969 1720 bp mRNA linear HTC 06-OCT-2010
DEFINITION Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
enriched library, clone:1810073G21 product:unclassifiable, full
insert sequence.
ACCESSION AK007969
VERSION AK007969.1
KEYWORDS HTC_FLI; HTC; CAP trapper.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 1720)
AUTHORS Adachi,J., Aizawa,K., Akahira,S., Akimura,T., Arai,A., Aono,H.,
Arakawa,T., Bono,H., Carninci,P., Fukuda,S., Fukunishi,Y.,
Furuno,M., Hanagaki,T., Hara,A., Hayatsu,N., Hiramoto,K.,
Hiraoka,T., Hori,F., Imotani,K., Ishii,Y., Itoh,M., Izawa,M.,
Kasukawa,T., Kato,H., Kawai,J., Kojima,Y., Konno,H., Kouda,M.,
Koya,S., Kurihara,C., Matsuyama,T., Miyazaki,A., Nishi,K.,
Nomura,K., Numazaki,R., Ohno,M., Okazaki,Y., Okido,T., Owa,C.,
Saito,H., Saito,R., Sakai,C., Sakai,K., Sano,H., Sasaki,D.,
Shibata,K., Shibata,Y., Shinagawa,A., Shiraki,T., Sogabe,Y.,
Suzuki,H., Tagami,M., Tagawa,A., Takahashi,F., Tanaka,T.,
Tejima,Y., Toya,T., Yamamura,T., Yasunishi,A., Yoshida,K.,
Yoshino,M., Muramatsu,M. and Hayashizaki,Y.
TITLE Direct Submission
JOURNAL Submitted (10-JUL-2000) to the DDBJ/EMBL/GenBank databases.
Contact:Yoshihide Hayashizaki
The Institute of Physical and Chemical Research (RIKEN), Omics
Science Center, RIKEN Yokohama Institute; 1-7-22 Suehiro-cho,
Tsurumi-ku, Yokohama, Kanagawa 230-0045, Japan
URL :http://www.osc.riken.jp/
REFERENCE 2
AUTHORS
CONSRTM The FANTOM Consortium, Riken Genome Exploration Research Group and
Genome Science Group (Genome Network Project Core Group)
TITLE The Transcriptional Landscape of the Mammalian Genome
JOURNAL Science 309, 1559-1563 (2005)
REFERENCE 3
AUTHORS
CONSRTM RIKEN Genome Exploration Research Group and Genome Science Group
(Genome Network Project Core Group) and the FANTOM Consortium
TITLE Antisense Transcription in the Mammalian Transcriptome
JOURNAL Science 309, 1564-1566 (2005)
REFERENCE 4
AUTHORS
CONSRTM The FANTOM Consortium and the RIKEN Genome Exploration Research
Group Phase I and II Team
TITLE Analysis of the mouse transcriptome based on functional annotation
of 60,770 full-length cDNAs
JOURNAL Nature 420, 563-573 (2002)
REFERENCE 5
AUTHORS
CONSRTM The RIKEN Genome Exploration Research Group Phase II Team and the
FANTOM Consortium
TITLE Functional annotation of a full-length mouse cDNA collection
JOURNAL Nature 409, 685-690 (2001)
REFERENCE 6
AUTHORS Carninci,P. and Hayashizaki,Y.
TITLE High-efficiency full-length cDNA cloning
JOURNAL Meth. Enzymol. 303, 19-44 (1999)
REFERENCE 7
AUTHORS Carninci,P., Shibata,Y., Hayatsu,N., Sugahara,Y., Shibata,K.,
Itoh,M., Konno,H., Okazaki,Y., Muramatsu,M. and Hayashizaki,Y.
TITLE Normalization and subtraction of cap-trapper-selected cDNAs to
prepare full-length cDNA libraries for rapid discovery of new genes
JOURNAL Genome Res. 10, 1617-1630 (2000)
REFERENCE 8
AUTHORS Shibata,K., Itoh,M., Aizawa,K., Nagaoka,S., Sasaki,N.,
Carninci,P., Konno,H., Akiyama,J., Nishi,K., Kitsunai,T.,
Tashiro,H., Itoh,M., Sumi,N., Ishii,Y., Nakamura,S., Hazama,M.,
Nishine,T., Harada,A., Yamamoto,R., Matsumoto,H., Sakaguchi,S.,
Ikegami,T., Kashiwagi,K., Fujiwake,S., Inoue,K., Togawa,Y.,
Izawa,M., Ohara,E., Watahiki,M., Yoneda,Y., Ishikawa,T., Ozawa,K.,
Tanaka,T., Matsuura,S., Kawai,J., Okazaki,Y., Muramatsu,M.,
Inoue,Y., Kira,A. and Hayashizaki,Y.
TITLE RIKEN integrated sequence analysis (RISA) system-384-format
sequencing pipeline with 384 multicapillary sequencer
JOURNAL Genome Res. 10, 1757-1771 (2000)
COMMENT cDNA library was prepared and sequenced in Mouse Genome
Encyclopedia Project of Genome Exploration Research Group in Riken
Genomic Sciences Center and Genome Science Laboratory in RIKEN.
Division of Experimental Animal Research in Riken contributed to
prepare mouse tissues.
Please visit our web site for further details.
URL:http://www.osc.riken.jp/
URL:http://fantom.gsc.riken.jp/
clone information is available at:
http://fantom.gsc.riken.jp/3/db/annotate/
main.cgi?masterid=1810073G21
FEATURES Location/Qualifiers
source 1..1720
/clone="1810073G21"
/clone_lib="RIKEN full-length enriched mouse cDNA library"
/db_xref="FANTOM_DB:1810073G21"
/db_xref="MGI:1902740"
/db_xref="taxon:10090"
/dev_stage="10 day old"
/mol_type="mRNA"
/organism="Mus musculus"
/sex="male"
/strain="C57BL/6J"
/tissue_type="pancreas"
misc_feature 1..1720
/note="putative"
/note="unclassifiable"
BASE COUNT 536 a 354 c 421 g 409 t
ORIGIN
1 acctatgtct gataggttgt ccagtggttg aacacaatgc ctttgcctac tcgctgtctg
61 tggagagaat ctcttaaatg ttttatacat tgtcagatgg tggtggaaca cacctttaat
121 accagcactc aggagacaga agcaggcaga tctctgagtt caagggcagc atggtataca
181 gagtgaattc caggacagcc caggctactc agagaaactt ttacttggtg ggaaaaaaaa
241 aagtatgcat ttatccgtga aataatatga gcacatgcca tggtgcacaa aaactcagag
301 gacagcttgc tggagtgtga gttctgggga gtcaacccca ggcctggctg caagtgtcat
361 tacatgctga gccatcttac taatgtacaa gtctctctcc agggattctg gtaccaagtg
421 gtaaaaatag aaaaaaaaaa aatgaaaacc ctcttcaaat gtcacaaact agcttgggga
481 ataaaaaaaa aaaatggcga gtaaattatt tagatattct actgctgtga gaattgccaa
541 gaacacttgt tattaaataa cactaataat aatcataaag ttaagagtag ttaatattgt
601 ggcacaacct cctcttgact ccttctccta tgtaacctga tgaagtcatc tcaatgggat
661 cccgacctgc tgactaaaat ttcttccagg gatgtgagaa caagagagct cacccttcct
721 gtattatccc cagccattcg gtacgcattg taatgtgaat ttgacaagga gcgttaccaa
781 acacatgttc tgaaaaatat cagggaaagc aaaagtagaa cttacatgga agacgtcact
841 tcaggcacac atggcaggtc acatgaccca ggaggacagc agagaccaca gagtgtctga
901 gagatggggg caggaggaaa aggcaaggac agcaggtgct gatgtgggtg agtaagaggt
961 agccaggtgg ctgtcagtgg agcctaaagg cagagctgcc agattaaaag ttctagtaaa
1021 gacatgctta gaagagaaag ctggaggggt caacagagac taaaagtttt gtttggttgc
1081 ttacaggagc atggagaaag tctataaagg cgcagagcac catgccaggg gctactctga
1141 tggaaaaaca gttgggacag aatgtcagag ctcacagagc ctcagaggaa cccttggttc
1201 ttccacaacc acagagatag ccactgtgtc tgcttagcct catgttagaa aacgttttcc
1261 atttgccagg aactcccaca taattatcat gggagtctca ataacatgag agggagccct
1321 cttgtacaaa tgaagatatc agcaaacagc aagcagtaat cactggaagg tgggagagag
1381 gtgggggacc caaggagaaa gccacactct ccgcccctgg aagacagaca gggagattgg
1441 ggtgtgtatt attataaaag aagatattga ccatggtatg aggcagactt gcaatggtat
1501 cttgcacttt tgcctcatgc cggctttctg cacttcagtg tcctctcctg caaggcagcg
1561 ctaaccataa gacctcctcg accatgagta gtgtactttc tacacgtgaa ccttttgatg
1621 cacttgcctg caactgagag ttcagctgag acttaagagt gactaaggaa gcattagtga
1681 cagtctctaa gccagcctgc tgtggccacc agtatctgtt
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