LOCUS AJ314647 3017 bp mRNA linear HUM 07-OCT-2008
DEFINITION Homo sapiens mRNA for hypothetical protein and STS WI12393.
ACCESSION AJ314647
VERSION AJ314647.1
KEYWORDS ORF1.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3017)
AUTHORS Jenne D.E.
JOURNAL Submitted (14-MAY-2001) to the INSDC. Jenne D.E., Neuroimmunology,
Max-Planck-Institute of Neurobiology, Am Klopferspitz 18A, 82152,
GERMANY.
REFERENCE 2
AUTHORS Jenne D.E., Tinschert S., Reimann H., Lasinger W., Thiel G.,
Hameister H., Kehrer-Sawatzki H.
TITLE Molecular characterization and gene content of breakpoint
boundaries in NF1 patients with long range deletions
JOURNAL Unpublished.
REFERENCE 3
AUTHORS Jenne D.E., Tinschert S., Stegmann E., Reimann H., Nurnberg P.
TITLE A common set of at least 11 functional genes is lost in the
majority of NF1 patients with gross deletions
JOURNAL Genomics 66(1), 93-97(2000).
PUBMED 10843809
COMMENT related entry AB011135
FEATURES Location/Qualifiers
source 1..3017
/db_xref="H-InvDB:HIT000247143"
/organism="Homo sapiens"
/map="17q11.2"
/mol_type="mRNA"
/db_xref="taxon:9606"
mRNA 1..3017
/product="hypothetical protein"
/note="ORF1"
CDS 1..2841
/product="hypothetical protein"
/note="ORF1"
/db_xref="GOA:Q96QE4"
/db_xref="H-InvDB:HIT000247143.12"
/db_xref="HGNC:HGNC:29070"
/db_xref="InterPro:IPR001611"
/db_xref="InterPro:IPR003591"
/db_xref="InterPro:IPR015753"
/db_xref="InterPro:IPR029423"
/db_xref="InterPro:IPR032675"
/db_xref="InterPro:IPR032754"
/db_xref="UniProtKB/Swiss-Prot:Q96QE4"
/citation=[2]
/protein_id="CAC44536.1"
/translation="MSWLRITAMAPPYVATIVFTSQGAQPLVWVKDPLQLTSNPLGPP
EPWSSRSSHLPWESPHAPAPPAAPGDFDYLGPSASSQMSALPQEPTENLAPFLKELDS
AGELPLGPEPFLAAHQDLNDKRTPEERLPEVVPLLNRDQNQALVQLPRLKWVQTTDLD
RAAGHQADEILVPLDSKVSRPTKFVVSPKNLKKDLAERWSLPEIVGIPHQLSKPQRQK
QTLPDDYLSMDTLYPGSLPPELRVNADEPPGPPEQVGLSQFHLEPKSQNPETLEDIQS
SSLQEEAPAQLLQLPQEVEPSTQQEAPALPPESSMESLAQTPLNHEVTVQPPGEDQAH
YNLPKFTVKPADVEVTMTSEPKNETESTQAQQEAPIQPPEEAEPSSTALRTTDPPPEH
PEVTLPPSDKGQAQHSHLTEATVQPLDLELSITTEPTTEVKPSPTTEETSAQPPDPGL
AITPEPTTEIGHSTALEKTRAPHPDQVQTLHRSLTEVTGPPTKLESSQDSLVQSETAP
EEQKASTSTNICELCTCGDETLSCVGLSPKQRLRQVPVPEPDTYNGIFTTLNFQGNYI
SYLDGNVWKAYSWTEKLILSENYLTELPKDSFEGLLSLQYLDLSCNKIRYIERHTFES
LPFLQYINLGCNLITELSLGTFQAWHGMQFLHNLILNRNPLTTVEDPYLFELPALKYL
DMGTTHITLTTLKNILTMTVELEKLILPSHMACCLCQFKNSIEAVCKTVKLHCNTACL
TNSIHCPEEASVGNPEGAFMKMLQARKQHMSTQLTIESEAPSDSSGINLSGFGGDQLE
IQLTEQLRSLIPNEDVRKFMSHVIRTLKMECSETHVQGSCAKLMLRTGLLMKLLSEQQ
EAKALNVEWDTDQQKTNYINENMEQNEQKEQKSSELMKEVPGDDYKNKLIFAISVTVI
LIILIIIFCLIEVNSHKRASEKYKDNPSISGA"
exon 1..1676
/number=1
/note="ORF1"
exon 1677..1748
/number=2
/note="ORF1"
exon 1749..1820
/number=3
/note="ORF1"
exon 1821..1892
/number=4
/note="ORF1"
exon 1893..1973
/number=5
/note="ORF1"
exon 1974..2045
/number=6
/note="ORF1"
exon 2046..2120
/number=7
/note="ORF1"
exon 2121..2239
/number=8
/note="ORF1"
exon 2240..2380
/number=9
/note="ORF1"
exon 2381..2673
/number=10
/note="ORF1"
exon 2674..2778
/number=11
/note="ORF1"
STS 2777..2882
/standard_name="WI12393"
/citation=[2]
exon 2779..3017
/number=12
/note="ORF1"
regulatory 2976..2981
/note="ORF1"
/citation=[2]
/experiment="experimental evidence, no additional details
recorded"
/regulatory_class="polyA_signal_sequence"
BASE COUNT 887 a 767 c 643 g 720 t
ORIGIN
1 atgtcttggc tgcgtattac tgccatggcc cctccttacg tggcaactat tgtctttact
61 agtcaaggag ctcagcctct ggtgtgggtc aaggacccgc tccagctgac ctctaacccc
121 ctggggccac ctgagccctg gtcttcccgc tcctcccatc tcccatggga atctccccat
181 gcacctgctc ccccagcagc cccgggggac tttgattacc tggggccctc tgcttcttcg
241 cagatgtcag ccctgcctca ggaaccaact gaaaatttgg ctccattcct gaaggaattg
301 gattcagctg gagagctgcc cctggggcca gagccgttct tggctgcaca tcaggactta
361 aatgacaagc ggactccaga agaaaggctc ccagaggtgg ttccgcttct caaccgggat
421 cagaaccagg ccctagttca gcttcctcgc ctcaagtggg ttcaaactac agatctagat
481 cgggctgcag gtcatcaggc agatgaaata cttgttccac tagacagtaa ggtttcaaga
541 ccaaccaaat ttgttgtttc gcccaagaac ctgaagaaag atctagctga acgttggagc
601 cttcctgaga ttgttgggat tccacaccaa ttatccaaac ctcagcgtca gaaacagact
661 ttgccagatg attatttgag tatggacaca ctgtatcccg gcagcctacc tccagaactc
721 cgggtgaacg cagatgagcc tccagggcct cctgagcaag ttggactttc tcaattccat
781 ctagagccca aaagtcaaaa tccagagacc cttgaagaca tccagtcctc ttcactccag
841 gaagaagccc cagcgcagct tctacagctc cctcaggagg tagaaccttc aacccagcag
901 gaggccccag ctctgcctcc agagtcctct atggagagtc tagctcaaac tccactgaat
961 catgaagtga cagttcaacc tccaggtgag gatcaagctc attataattt gcccaagttt
1021 acagtcaaac ctgcagatgt ggaggttacc atgacttcag agcctaaaaa tgagacagaa
1081 tctacccaag cccagcagga ggccccaatt cagcctcccg aggaggcgga accttcttct
1141 acagccctga ggactacaga tcctcctcca gaacaccctg aggtgacact tccaccttca
1201 gacaagggtc aggctcagca ttcacacctg actgaagcca cagttcaacc tctggacctg
1261 gagcttagca taactacaga gcctactaca gaggttaaac cgtctccaac cacggaggaa
1321 acctcagctc agcctccaga cccggggctt gccataactc cagaacccac tacagagatt
1381 ggacattcca cagccctgga gaagactaga gctcctcatc cagaccaggt tcagactctg
1441 catcgaagcc tgactgaagt cacaggtcca cctacaaagt tagaatcttc gcaggattca
1501 ttggtgcagt ctgaaactgc accagaggaa cagaaggcct ccacaagcac caacatatgt
1561 gagctctgca cctgcggaga tgagactctg tcatgtgttg gtctcagccc aaagcagagg
1621 ctccgccaag tgcctgtgcc agagcccgac acctacaatg gcatcttcac caccttaaat
1681 ttccaaggaa actatatttc ataccttgat ggaaatgtat ggaaagcata cagttggacc
1741 gagaaactaa ttctcagtga aaattatttg actgaattac ctaaggattc atttgaaggc
1801 ctgctatccc tccagtattt agatttatcc tgcaataaaa tacgatatat tgaaagacat
1861 acatttgaat cactaccatt tttgcagtat ataaatctgg gctgcaattt aattacagaa
1921 ctgagccttg gaacatttca ggcctggcac ggaatgcagt ttttacacaa cttaattctc
1981 aatcgcaatc ctctgactac tgtcgaagat ccatatctct ttgaactgcc ggcattaaaa
2041 tatctagaca tgggaacaac acacatcaca cttacaacac ttaagaacat tctcacgatg
2101 actgttgaac tggaaaaact gatcttacct agccatatgg cctgctgcct ctgccaattt
2161 aaaaatagca ttgaggctgt ctgcaagaca gtcaagctgc attgcaacac tgcatgtctg
2221 actaacagca tacattgtcc tgaagaagca tctgtaggga atccagaagg agcgttcatg
2281 aagatgttac aagcccggaa gcagcacatg agcactcagc tgactattga gtcggaggcg
2341 ccctcagaca gcagtggcat caacttgtca ggctttgggg gtgatcagct tgaaattcag
2401 ctaaccgagc agctacggtc cctcatcccc aacgaggatg tgagaaagtt catgtctcat
2461 gttatccgga ccttgaaaat ggaatgttca gaaacacatg tgcaagggag ctgtgccaag
2521 ctcatgttgc gaacaggcct cctgatgaag cttctcagcg agcagcagga agcaaaggca
2581 ttgaatgtag aatgggatac ggaccaacaa aaaacaaatt atattaatga gaacatggaa
2641 cagaatgaac agaaagagca gaagtcaagt gagctcatga aagaagttcc aggagatgac
2701 tataagaaca aactcatctt cgcaatatct gtgactgtaa tactaataat tttgattata
2761 attttttgtc ttatagaggt gaattcacat aaaagggcat cagaaaaata caaagacaac
2821 ccatcaatat caggagcctg agcatgagtt aaagcatgtg gatggcctgg agctatgttt
2881 ttaaaattgt tattaaatat tggtttttta cttaaatcaa tgaaaacttt ctttactttg
2941 tggttgtgtt cctcaaaatg agaattttta acaataataa aaataaagct tgttagatca
3001 tttttaatgg taaaaaa
//