LOCUS AJ297583 793 bp mRNA linear HUM 07-OCT-2008 DEFINITION Homo sapiens partial mRNA for MHC class II antigen (HLA-DRB1 gene), DRB1*1402 allele. ACCESSION AJ297583 VERSION AJ297583.1 KEYWORDS HLA-DRB1 gene; HLA-DRB1*1402 allele; human leucocyte antigen DRB1; major histocompatibility complex; MHC class II antigen. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 793) AUTHORS Corell A. JOURNAL Submitted (15-AUG-2000) to the INSDC. Corell A., HLA Informatics Group, Anthony Nolan Research Institute, The Royal Free Hospital, Pond Street, Hampstead, NW3 2QG London, UNITED KINGDOM. REFERENCE 2 AUTHORS Corell A., Cox S.T., Soteriou B., Ramon D., Madrigal J.A., Marsh S.G.E. TITLE Complete cDNA sequences of the HLA-DRB1*14011, *1402, *1403 and *1404 alleles JOURNAL Tissue Antigens 59(1), 66-69(2002). PUBMED 11972886 FEATURES Location/Qualifiers source 1..793 /db_xref="H-InvDB:HIT000246750_09" /organism="Homo sapiens" /chromosome="6" /map="6p21.3" /mol_type="mRNA" /country="Venezuela" /sex="female" /haplotype="HLA-A*02, B*15, DRB1*14" /clone="AMALA-S8" /cell_line="AMALA" /cell_type="EBV transformed B lymphocytes" /tissue_lib="ECACC" /db_xref="taxon:9606" CDS 1..>793 /gene="HLA-DRB1" /product="MHC class II antigen" /function="antigen presenting molecule" /note="DRB1*1402 allele" /db_xref="GOA:Q9GIY3" /db_xref="HGNC:HGNC:4948" /db_xref="InterPro:IPR000353" /db_xref="InterPro:IPR003006" /db_xref="InterPro:IPR003597" /db_xref="InterPro:IPR007110" /db_xref="InterPro:IPR011162" /db_xref="InterPro:IPR013783" /db_xref="InterPro:IPR014745" /db_xref="InterPro:IPR036179" /db_xref="UniProtKB/Swiss-Prot:Q9GIY3" /protein_id="CAC08823.1" /translation="MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSEC HFFNGTERVRFLERYFHNQEENVRFDSDVGEYRAVTELGRPDAEYWNSQKDLLEQRRA AVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRW FRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWR ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPRGF" sig_peptide 1..87 /gene="HLA-DRB1" /note="DRB1*1402 allele" mat_peptide 88..>793 /gene="HLA-DRB1" /product="MHC class II antigen" /note="DRB1*1402 allele" BASE COUNT 169 a 201 c 257 g 166 t ORIGIN 1 atggtgtgtc tgaggctccc tggaggctcc tgcatggcag ttctgacagt gacactgatg 61 gtgctgagct ccccactggc tttggctggg gacaccagac cacgtttctt ggagtactct 121 acgtctgagt gtcatttctt caatgggacg gagcgggtgc ggttcctgga gagatacttc 181 cataaccagg aggagaacgt gcgcttcgac agcgacgtgg gggagtaccg ggcggtgacg 241 gagctggggc ggcctgatgc cgagtactgg aacagccaga aggacctcct ggagcagagg 301 cgggccgcgg tggacaccta ctgcagacac aactacgggg ttggtgagag cttcacagtg 361 cagcggcgag tccatcctaa ggtgactgtg tatccttcaa agacccagcc cctgcagcac 421 cacaacctcc tggtctgttc tgtgagtggt ttctatccag gcagcattga agtcaggtgg 481 ttccggaatg gccaggaaga gaagactggg gtggtgtcca caggcctgat ccacaatgga 541 gactggacct tccagaccct ggtgatgctg gaaacagttc ctcggagtgg agaggtttac 601 acctgccaag tggagcaccc aagcgtgaca agccctctca cagtggaatg gagagcacgg 661 tctgaatctg cacagagcaa gatgctgagt ggagtcgggg gctttgtgct gggcctgctc 721 ttccttgggg ccgggctgtt catctacttc aggaatcaga aaggacactc tggacttcag 781 ccaagaggat tcc //