LOCUS AF410902 7671 bp DNA linear HUM 26-JUL-2016 DEFINITION Homo sapiens neurotrophin receptor tyrosine kinase type 2 (NTRK2) gene, promoter region and partial cds; alternatively spliced. ACCESSION AF410902 VERSION AF410902.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 7671) AUTHORS Stoilov,P., Castren,E. and Stamm,S. TITLE Analysis of the human TrkB gene genomic organization reveals novel TrkB isoforms, unusual gene length, and splicing mechanism JOURNAL Biochem. Biophys. Res. Commun. 290 (3), 1054-1065 (2002) PUBMED 11798182 REFERENCE 2 (bases 1 to 7671) AUTHORS Stoilov,P.G., Castren,E. and Stamm,S. TITLE Direct Submission JOURNAL Submitted (16-AUG-2001) Institute of Biochemistry, FAU Erlangen, Faculty of Medicine, Fahrstrasse 17, Erlangen 91054, Germany FEATURES Location/Qualifiers source 1..7671 /organism="Homo sapiens" /mol_type="genomic DNA" /db_xref="taxon:9606" gene 1..>7671 /gene="NTRK2" regulatory 1..1880 /regulatory_class="promoter" /gene="NTRK2" mRNA join(1881..2074,2591..2712,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 1" mRNA join(1881..2074,2624..2712,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 2" exon 1881..2074 /gene="NTRK2" /number=1a mRNA join(2053..2074,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 3" exon 2053..2074 /gene="NTRK2" /number=1b exon 2591..2712 /gene="NTRK2" /number=2a mRNA join(2613..2712,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 4" exon 2613..2712 /gene="NTRK2" /number=2c exon 2624..2712 /gene="NTRK2" /number=2b mRNA join(2818..3177,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 5" exon 2818..3177 /gene="NTRK2" /number=3a mRNA join(2917..3177,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 6" exon 2917..3177 /gene="NTRK2" /number=3b mRNA join(3014..3177,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 7" exon 3014..3177 /gene="NTRK2" /number=3c mRNA join(3057..3510,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 8" exon 3057..3510 /gene="NTRK2" /number=4a mRNA join(3319..3510,3666..>4249) /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 9" exon 3319..3510 /gene="NTRK2" /number=4b exon 3666..4249 /gene="NTRK2" /number=5a mRNA 3866..>4249 /gene="NTRK2" /product="neurotrophin receptor tyrosine kinase type 2" /note="alternative transcript 10" exon 3866..4249 /gene="NTRK2" /number=5b CDS 4038..>4249 /gene="NTRK2" /codon_start=1 /product="neurotrophin receptor tyrosine kinase type 2" /protein_id="AAL67968.1" /translation="MSSWIRWHGPAMARLWGFCWLVVGFWRAAFACPTSCKCSASRIW CSDPSPGIVAFPRLEPNSVDPENITE" BASE COUNT 1866 a 1732 c 1936 g 2137 t ORIGIN 1 ttatgtatgt gttcattggg ttgtgatata aaaggcattt cttattgtgg atcatggtca 61 aaagagtttg agaaacattg ctctaggtac atcatggttc agtgcaggta ggaacctgca 121 gcacttaatt tctatgcctg cattcaaggg atctagaaaa aagtcatctc tatattgttc 181 atctgaaaaa tgttcatcat ctcttacaaa ggtgtgatct gagaatcctt gaagtgatct 241 ctgggacata tcttataggt cttaaaatcg aggtagatcc acaattctat cagttaagaa 301 atagctactg atcaccagtg tgttctagac actgtccatg gaggtgttca gttactagca 361 tgaataagtg ggaggccctc tctggcccag tactgaagcc tatctggcta ctaaatgaga 421 cagaaagtaa ggcaaggttt taagcagtgc taggagcact cagaacgcaa ggaagatttg 481 aaattgtgaa ggtgagaagg agcgtgtctg ggggaattat ccaggttctt gcagacttag 541 aggttaagaa agtgagatct cctttatttt attttattta ttcattaaaa atacacatat 601 attttaacac ctactatgtc cttgagagat atcaatgaat aaaatagata aaaatccctg 661 ccttcatgga gtgtacattc ttctgggaga aattttaaaa atatatataa taagtaaatt 721 atctgtccaa aggacaaact gctatggttg aaatagtaga gcagaagtag ggtgattaga 781 aagtaggacc gcaaatccta attttaagtg ggagatagtg gaatatattt agaatccaac 841 tataatagta gcatatattt actctaatag aaactctaca aatattccaa cataattaga 901 ttcttctggt gtacaaacca ccgtaagact gcctattctc cataccgcat tgacatgctg 961 cagccactag ggcgaaaatg ggccgtttct tagaaaaatg ggctcagagt atgggagtgt 1021 gagagaaatg tgggtgatta cgcacacact ccttccttcc ccaagtgttc ctcaggggct 1081 tctccgctta aggttcactg acaagacagg cggagtttta cgtgcgtctg agaccaggtc 1141 atttttgccc ttggcgtctc ttccttggcg cgtcctcacc tagtagagaa tagaggcgca 1201 gctcaggagt aaacttcagc ctggccgttc accactcgat gtgtgttaca gccgagtgac 1261 agtggtgaga tagacctgct ggccttgctt tcgggacctg cagcaagatt tttgggtgct 1321 gtccaagaat tcccgcggtt acactcagcg cccaggatct gtacaaaaaa gccccaatag 1381 atgttttacg ttcccttcgt aataattaac gcttggccta gatccgagca ttcactctaa 1441 cgttcggttt cttgatcctt cccatcccca aactctgcgg gtagatcagt gactattact 1501 atattttgaa cgagactcca acccattgct ctctctcgag agaaggattg cccgcctttt 1561 tcccccgggc aggagctcgg cgaggccagg agagccgcgc accggccggg cagggacgcg 1621 caggcgtcgg gcgccgctgg ttgcgcatct ggcgccagag cgcgccccca gcgctgtgcc 1681 cgccgcgacc ggggccatgg gctggtgctc cggagcgtgc cgggcgctct ctccccgcgc 1741 gggggcacca gagccctcgg aagtgtcagg cactgcggtg tattttccca gttctctttt 1801 aaatgactgc ggaaaaacag attccgagcc gcaaaaggga agacggattc tcagacaagg 1861 cttgcaaatg ccccgcagcc atcatttaac tgcacccgca gaatagttac ggtttgtcac 1921 ccgaccctcc cggatcgcct aatttgtccc tagtgagacc ccgaggctct gcccgcgcct 1981 ggcttcttcg tagctggatg catatcgtgc tccgggcagc gcgggcgcag ggcacgcgtt 2041 cgcgcacacc ctagcacaca tgaacacgcg caaggtacgg caggggagca agggcttggg 2101 atgccctacg tgggggtggg catcgcgggg agtgaatcca cgatctggga atggctacat 2161 cccgtcaggt taaaggatga gagaaaatga cgcggcgcca cacatcggac aggccagggt 2221 ggccaccgag catttagaat acgcatcagg cgcgctccct tcccctcaca tgtctctatt 2281 tcccgggcgt gtgatggcag aaaacggcag gaaaaagacc cacttagaga gctagaattg 2341 tgtttggaga ctcccttccc tctgcaaaag caccaacagg aagcccctcc aaaaccaccg 2401 atccccaaat aggtggcccg gaatgggggc ggtgatcctt ggttaccaat gcagaacacg 2461 ttttggtgtt tacaacattt atttattttt aggatagctt gccctccctt ttaggcaggg 2521 tgggaaagga gaacgcgggg agggagaagg gagggaggat tcctataata agaatcagcg 2581 catttttcag agctgaacca agcacggttt ccatttcaaa aagggagaca gcctctaccg 2641 cgattgtaga agagactgtg gtgtgaatta gggaccggga ggcgtcgaac ggaggaacgg 2701 ttcatcttag aggtacctgg atgtaaatgc acacacacac acagacacac acacgcacgc 2761 gcgtgcatgt ctacacggcc aggatgtgtg cgtgtgtgcg cgcgtgtgtg aactcccaca 2821 tgctgctgct gtctgcttct ggccagtggc accgatgcct ccctcctccc tgctcgcccc 2881 cagattcccc tcccctccct ggtgcttttg tctggagggt gttatgggtt tgtgtgtgta 2941 tgagcgtgtg tgtgtttttg gatttcagac taattttctg gagtttctgc ccctgctctg 3001 cgtcagccct cacgtcactt cgccagcagt agcagaggcg gcggcggcgg ctcccggaat 3061 tgggttggag caggagcctc gctggctgct tcgctcgcgc tctacgcgct cagtccccgg 3121 cggtagcagg agcctggacc caggcgccgc cggcgggcgt gaggcgccgg agcccgggtg 3181 agcagcgcag atagtgccct cggtcgcctc ggccctcact gtctccccct ggggcggcct 3241 cggctactcc ccaggtggga cgtgccgcgc cacctgcccg cgccaccggc acccagcggc 3301 cgtggcggat tctgcagcat cattcggggg ccccgtcgcg gagccaaagc cgccggcagt 3361 ctccgcattc ccctttaaag ggtccttcgc ccggcctgta ccatggaatc ctgtcttggg 3421 gaccctttcc ctacctcccc tcccttggcc tcaggctcga agagagagtg ggcacactgg 3481 tggctccagc ggcgtcagtg ccatcgcggg gcaagttgat tcctgggccg gagctgggca 3541 ctcatccatc cacagtctcc gggctggggt cggggtgggg atgacgcgag cagagaggga 3601 gagtgcccca attagtggtg ttgggggtcc tacgctcagt cttacgcgtg tctgtttgtc 3661 ctcagcctcg aggtgcatac cggaccccca ttcgcatcta acaaggaatc tgcgccccag 3721 agagtcccgg gagcgccgcc ggtcggtgcc cggcgcgccg ggccatgcag cgacggccgc 3781 cgcggagctc cgagcagcgg tagcgccccc ctgtaaagcg gttcgctatg ccggggccac 3841 tgtgaaccct gccgcctgcc ggaacactct tcgctccgga ccagctcagc ctctgataag 3901 ctggactcgg cacgcccgca acaagcaccg aggagttaag agagccgcaa gcgcagggaa 3961 ggcctccccg cacgggtggg ggaaagcggc cggtgcagcg cggggacagg cactcgggct 4021 ggcactggct gctagggatg tcgtcctgga taaggtggca tggacccgcc atggcgcggc 4081 tctggggctt ctgctggctg gttgtgggct tctggagggc cgctttcgcc tgtcccacgt 4141 cctgcaaatg cagtgcctct cggatctggt gcagcgaccc ttctcctggc atcgtggcat 4201 ttccgagatt ggagcctaac agtgtagatc ctgagaacat caccgaaatg tgagttcctg 4261 gagcttttcc tcctttttct ccttgccctt agggcccgag ctggccaggt gggtaggtcc 4321 tggaagtgaa tgctgtccca agagtgggga gaagtcaaag acaagagatg caggacaggg 4381 tcatctgtca gttacctgct gtttcactgg cttgggactg ctagtgcagg gagaagtgtg 4441 acactttaga ataagtttca aatatagata tacatatgcc gattatatat ttattcctcg 4501 tgggaaggaa ctcactatgc tttttatatt tcaaagctct gctgggtgtg ctttaggctt 4561 tcagtatgca ctaacttagt tttgggcatt tttgtttcat aaagtgctgt gtgtatgttg 4621 tgttagaagt tccattaata ttcactagaa aagaggttaa aataattaac tttcccaaat 4681 ctgttgaggg aagtgacagt ctctccctta acatcttttt tgagatttaa gttaaccaat 4741 ttcccttttc attttatata tcggattttg cttaggagat ggcatccaga gatggccttg 4801 aaaatgatct gtaagaggag aagttctgag tgttgaaatg cactcgctca aaagaaaaaa 4861 atatgatagt tggaagccta aaagcctggt ctaatttaat ttggacttga cttcccagag 4921 atatgatttt gagaccactt ggattataac tcttaattgc ccattgaata atttcccagg 4981 actaggttgg atgataaagc actgggtaga actctgatga aggctggctt tagcattgga 5041 cctctgtgtc cctggaaatg tttgagcttg ttgtggcttg aagaaacaga actgtgtatt 5101 tctattctcc ttttctgatg ctttgtgaca aatgcatcac caagcaagaa cttgccagtc 5161 ctttctctag cattcctgtg tcacctctac tggactgtta ttgttatcat ttttttcctg 5221 aaggatgctg tcattccata catctcatta acatgagatt ttattcgtat acgtggaaga 5281 ttgtaaggca aagtttctcc cagttttcct tattgtgttt gatactgaga taggcagccc 5341 taaagtgggg cttgggctgt ggccttccgg ttgtcgagtg cgcatgcatt tttccttcca 5401 cagaaaacat acaaccatgt ttctgccaac gtagttgacc aagataacct gttttttaat 5461 gtaagtaaga gaccttccta gtctctgttg cctgttctgc tgctgatgct tatggtgtaa 5521 gcctcaggca aaaggaaatg acagcagagc agaggggaat gttcaggcct agcatagctg 5581 agatgtgtcg ggagcagcca actgtcgggc tgagtccagg gtgctaggat ctctatcttt 5641 ttggcaagga gagcaggagc caagagcgga gagcaagggt ggatagggcc ccaactgtgg 5701 tggtcttgga ctgggctggt tgaggcttac caggctggtc caaagtctgt ggccttttgt 5761 cagaatcttt ttcatgagat ggggtgtcag tagttagatg gagaaggcca tatggaattc 5821 agagtgcttc tgactgtttt gagattatgg ggagtgcctt ccacagtcag atattgttgt 5881 gtgtgtgtgg tggtgctttt aaaattctgt tttaggtgat agatgcatat aatgaagaaa 5941 gaaagaagat agggctgatc attttcactt tgtttttctg tttgataatt ttaaggccat 6001 gatctgagaa aaaggaaata aaactatctt taaatctaaa aaattattat ttcagacctt 6061 cctgatctta gctgcctgat gtatatgaaa tcaactgatt tcagcagagc tttcttatat 6121 ctgtcctcac aattgttgtt gcttctttta tatctgatgg caggttccta ttttcagctt 6181 ttttaaagta gattttaaaa atatttacaa aagcatgtgt catagttatt cattcaatcg 6241 tggcacttct aatttctact ctaacttttt tcccttttga tttgaaaacc tcttggggtt 6301 gtgggattgg agaggtatat agggctaagt gttgagaaca gggaattagg ttagtaatat 6361 tagtctggct gggtagatgt gagtcctgag acaaagtatg tttctctgct ctatctcagc 6421 tttgtgtgag cccagccagt ttgtgcccca gtgcctttgt ctgtaactcg tatgacaata 6481 cttctttgga aagtactcca tataattatt ttgaattctg cttttttgac ctaaaaatga 6541 catcagtgga tgcgcttgtt tcactcgcat ccttatatga caccatctat gttctttttc 6601 ttacatatta atatttgctt gcacagcttt taaattcttg tccagtggat accagctaca 6661 gttggaacca aattatacat attttaaaac tttgttgtta ggcccagtgg tattcctaaa 6721 ataacctgtt gtaaagttct ggtttagtgg tatgtagctg aagttacgtg cgtctatttt 6781 ttaaaaatag aaataatgtg gtgaataaac tgtgattagc aacacacaac ttgctgaaac 6841 aacggtttac catatcattc aaaaatggtg tatcttttag catctatata ttaaaccatc 6901 atgcccttag ggtcctaaga acacaaatag tgggacatta aaaaaaatgt gtagattaac 6961 caagaggtag gatctttttg ttttgttttg tttttacatg catgctttca gctaagctga 7021 cattttggtc ttcagagtca ttgaacctat tttattaaaa aatcttccca tcacagtacc 7081 ctgttttaat atttttttgc ccactaatgt gacataacta gatcaatatc tatctatagg 7141 tatgtatcac gcctgctcaa catcacactg ctaagtggca gctcctgtta tttggaaatg 7201 gttataccac agcagtgtta aaatgaattt aaacgcagta ccaatgtcac atgcaatgga 7261 attcaagagt gaagcctgtt gttggaatta tgtaactggc cgtttaaatc ccagttgtat 7321 taagtgccaa agtgcattgc aaaggacaag ttctgtttca cccaagtggt aaaaggcaca 7381 gtcaaaagaa gtcgtgcatt tttttagctg tggtaaaaaa aaaaatacat aacctaaaat 7441 gtaccatctt acagttcagt agtgttctgt gtatccatgt tgctgtggaa gggcatgcat 7501 ttttatgttg cacgtgcttt atgaagacta atagggatct tttttttgaa tttctccagt 7561 ggtattctct gatttggggg taatatttga gaacagcctt atatttttcc tcttagcaca 7621 acctaaatag aatttgaagc ttctcctatg acagactctg tgtgcaattt a //