LOCUS AF378652 4369 bp DNA linear PLN 21-JUN-2002
DEFINITION Porphyra suborbiculata specimen voucher WELT A22999 small subunit
ribosomal RNA gene, partial sequence; internal transcribed spacer
1, and 5.8S ribosomal RNA gene, complete sequence; and internal
transcribed spacer 2, partial sequence.
ACCESSION AF378652
VERSION AF378652.1
KEYWORDS .
SOURCE Pyropia suborbiculata
ORGANISM Pyropia suborbiculata
Eukaryota; Rhodophyta; Bangiophyceae; Bangiales; Bangiaceae;
Pyropia.
REFERENCE 1 (bases 1 to 4369)
AUTHORS Broom,J.E., Nelson,W.A., Yarish,C., Jones,W.A., Aguilar Rosas,R.
and Aguilar Rosas,L.E.
TITLE A reassessment of the taxonomic status of Porphyra suborbiculata
Kjellm., Porphyra carolinensis Coll et J. Cox and Porphyra
lilliputiana W.A. Nelson, G.A. Knight et M.W. Hawkes (Bangiales,
Rhodophyta) based on molecular and morphological data
JOURNAL Eur. J. Phycol. 37, 227-236 (2002)
REFERENCE 2 (bases 1 to 4369)
AUTHORS Broom,J.E., Nelson,W.A., Yarish,C., Jones,W.A., Aguilar Rosas,R.
and Aguilar Rosas,L.E.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2001) Department of Biochemistry, University of
Otago, PO Box 56, Dunedin, New Zealand
FEATURES Location/Qualifiers
source 1..4369
/organism="Pyropia suborbiculata"
/mol_type="genomic DNA"
/specimen_voucher="WELT A22999"
/db_xref="taxon:1185355"
/dev_stage="gametophyte"
/country="China: Weihai Peninsula, Shandong"
rRNA join(<1..527,1494..2733,3312..3339)
/product="small subunit ribosomal RNA"
intron 528..1493
/note="putative group IC1"
intron 2734..3311
/note="putative group IC1"
misc_RNA 3340..>4369
/note="contains internal transcribed spacer 1, 5.8S rRNA,
and internal transcribed spacer 2"
BASE COUNT 1103 a 1002 c 1216 g 1048 t
ORIGIN
1 agccatgcat gtctaagtat aaactacttt atactcgtga aactgcgaat ggctcattaa
61 aacagttata gtttctttgg gaactttact acttggataa ccgtagtaat tctagagcta
121 atacatgcct caacgcccga cttttgaagg gtggtattta ttggataaaa aaccatcgtg
181 ttccttcggg agcgctttga gatgattcac attaacttgt cggatcgcaa ggccttgtgc
241 cggcgactgc ccattcaaat ttctgcccta tcaactttcg atggtagagt attggtctac
301 catggtgtcg acgggtgacg gggaattagg gttcgattcc ggagagggag cctgagaaac
361 ggctaccaca tccaaggaag gcagcaggcg cgcaaattac ccaatcccga ctcggggagg
421 tagtgacaag aaataacaat agggggccct ttgggccttc taattggaat gagaacaatt
481 taaatccctt atcgaggatc cattggaggg caagtctggt gaacgcagtt ccactcgctc
541 gtcgtgtcga tcgtacgcaa gcgcaccgtg tgaagcatca agccctcgtt aaaataaaac
601 agcgccagat gtctcttcca gaagtaagtc tcgcaaggag agcacacaac aagagcggcc
661 agtcaactct gggcgtgtgt gacgctgcag ctgaagtgca tataggtcgg tgtttgcaag
721 ctgtgacaaa gaatggggtg gaagtgtgga agctgtccaa aacgaagtgt ctcctgcaag
781 aaatacctcg tgatggacgc tactcgcacg ctcagaaaaa gcatttttat gtctaccagg
841 cggtggcgta cgccagattt ggtagagagg aaatgctcaa agtgaccacc tcaaagctag
901 gcacagacct gaccatatca catgtgtgtg gcacacatca ttgcttagca gcgcatcact
961 taatgttgga accgaagcgt gtaaatgacg atcgtgtgca ctgccatgta tttctcgggc
1021 gcgtttctga gccttcagaa aggcatgcgc tggcagagcg ccactgtcca cattcgccgc
1081 agtgctattc tgtttgactt gctaaaggaa agaggcaaaa ggtgggcaac tttcaactaa
1141 tgagccccca ccatacactt tgaaattgtc ggggagtgcc tgttaggcct tttgactacc
1201 gcggtccgcc gagaggtgag ggcgagcaat cgcccagacg cagcagtgca tgtaacggtg
1261 catggaaggt aaaaacgtca aaggataggg ttgatccgca gggaagcgcg agtgcagtgt
1321 ttttgtcttg acactgcaaa ggcgaacctt cagagactct aataaagtgg gcgcaagctt
1381 aagggagagt ccaatccact gggaaaccag gtccacagga gtaatggggt cgatggctcg
1441 ccccagagga ctgtggacgg catcaccctc aaggtgatgt cgggttatgc atggccagca
1501 gccgcggtaa ttccagctcc aatagcgtat attaaagttg ttgcagttaa aacgctcgta
1561 gtcgaacctc ggggcgcgcc cacgggccgg gcttctgcct tgttgccagt gggggtttgt
1621 ccccttttgt cggaacgtgg tgtgttcggg gcttcactgt ctcagcacgc aaagctgcgg
1681 gccgaccgtt tactgtgaag aaagtaaggt gttcaaagca ggccattgcc ttgaatatgt
1741 gagcatggaa taatagaata ggacttgggc tctattttgt tggtttccag tgaccaagta
1801 atgattaata gggatggttg ggggcattcg tatttcattg tcagaggtga aattcttgga
1861 ttgatggaag acgcactact gcgaaagcat ctgccatgga tgttttcatt gatcaagaac
1921 gaaagttagg ggatcgaaga cgatcagata ccgtcgtagt cttaaccata aacgatgccg
1981 actggggatt ggcgggggca atattttatg acttcgtcag caccctgagg gaaaccaaag
2041 tctttgggtt ctggggggag tatggtcgca aggctgaaac ttaaaggaat tgacggaagg
2101 gcaccaccag gagtggagcc tgcggcttaa tttgactcaa cacgggaaaa cttaccaggt
2161 ccggacagaa gaatgattga cagactgaaa gctctttctt gattttttgg ttggtggtgc
2221 atggccgttc ttagttggtg gagtgatttg tctggttaat tccgttaacg aacgagacct
2281 cgccctgcta aataggtgcg cgcatgccag aactgcgttc ttaccttctt agagggacta
2341 tgcgcgtcta gcgtatggaa gattgaggca ataacaggtc tgtgatgccc ttagatgttc
2401 tgggccgcac gcgcgctaca ctgatgcttt caacgagttt cacttgacag ccctgggtcg
2461 gaaggcccgg gtaatctttt gaaaatgcat cgtgctgggg atagatcatt gcaattattg
2521 atcttaaacg aggaattcct tgtaggcgca ggtcatcagc ctgcgccgaa tacgtccctg
2581 ccctttgtac acaccgcccg tcgctcctac cgattgaatg gtccgatgaa atgtccggat
2641 cgcggctggt gtgatggttt catccagaac gctagcggtg agaagctcat taaatcttac
2701 catttagagg aaggagaagt cgtaacaagg ttttgccgta tccacacagt gcgaacgttt
2761 ctcgatcctt tcgcaggaaa acgtacacga agcctttgca gcccgataag ggtgcacagt
2821 acgcgactct aaaacactga gactgtggtc aatgcaagcg gcggtgtgga gagtttgcct
2881 cgtttcaacg gggcggcaca cacacacaca cagctgcgac tttctcaaat tgcgggaaca
2941 ccctaaagtc gacagatacc gcggcctatg gcgaaacgct atcgggtgcc agcagtcggg
3001 gtagtgccct gatggatggt aacaactctg tcgaatggac aagccagctt ctctctctct
3061 ctctatctga gaaagatgtg gctcgaaaat gggcaatccg cagccaagcc cctaaggtct
3121 ttcatcttga ctagggggaa aggttcacag actgtaaggg aaggggttct ttcactgaaa
3181 agggcttaag agacagtcgg tcccctgcga aagcagagtc tcagatgagg aaggcgctta
3241 tgaaaagtag gcgctggaga gctctgggag cctacttgta ggcgggaagt tttccaaaac
3301 aatcacacgt tccgtaggtg aacctgcgga aggatcattc acaaacatag atgggactga
3361 cactcgcata cacacatgcg aaagatggac acaagcacaa aaaaaagcag aagggggggg
3421 ggaaaggaaa gcctctagag gctccccctt gctccccctt gtcggctttt gttgggtgaa
3481 agcccaacac aacacattca cacactgtat atgccccttt ttgtcttaac cgcttgccac
3541 atagtgctgc tcacacttgc tcttcctctt tcacgagagg aaagagcggg ggcgagagca
3601 caggtgtggg gagactgtct gtatacaaaa gagtaacaaa agatacaact cttggcgatg
3661 gatatcttgg ttctcgcaac gatgaagaac gcagtcagct gcgaaaacta atgtgaattg
3721 cagaactacg tgaatcattc agtttttgaa cgcaagttgc gctcacgccc ccgggtgtga
3781 gcatgcctgt ttgagtgtcg atgtaggacg ttaagcttct tacatacagt gaaaacaatc
3841 gactctccta gcctcttttt ctagcaaaaa aggggtctgg tgcacgtcgg aaatgggtct
3901 ttttggttgc ctcctcctga agtgggcttc acccgaaact tgtcattaat atgctcgcca
3961 ggggccagtc gcctagcgca aaagttgccg tttgcgtcaa ggtcctggag cggcaatctg
4021 agtatgaacg gaggaataag aaacgtcttg ggctcacgtt tgtctctcac ctctctgtcc
4081 cgccgtccaa gatgggacgt gaaggggagg ggggaggcag ataggggtcc tactatagac
4141 acaccccccc cgctatgtgg gggggatgga gttggtacta atggccaagg gtcgcttcac
4201 gttttgactc gctatcggcg tggagagggc tttttctgtg ggagagttcc ttcggtttct
4261 agggttgtcg tgacactaag gctgctgtcg ctggaacggg ccgttcataa caacccaggt
4321 aacgcacgga cggccgttgc tgctgttctt caccggacat gcacccttt
//