LOCUS AF251034 949 bp mRNA linear HUM 15-AUG-2000 DEFINITION Homo sapiens homeodomain protein RINX, isoform S1 (VSX1) mRNA, complete cds, alternatively spliced. ACCESSION AF251034 VERSION AF251034.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 949) AUTHORS Hayashi,T., Huang,J. and Deeb,S.S. TITLE RINX(VSX1), a novel homeobox gene expressed in the inner nuclear layer of the adult retina JOURNAL Genomics 67 (2), 128-139 (2000) PUBMED 10903837 REFERENCE 2 (bases 1 to 949) AUTHORS Deeb,S.S., Hayashi,T. and Huang,J. TITLE Direct Submission JOURNAL Submitted (03-APR-2000) Medicine and Genetics, University of Washington, Box 357360, 1705 NE Pacific St., Seattle, WA 98195-7720, USA FEATURES Location/Qualifiers source 1..949 /db_xref="H-InvDB:HIT000075033" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="20" /map="20p11.2" /clone="S1" /tissue_type="retina" /dev_stage="adult" gene 1..949 /gene="VSX1" /note="RINX" CDS 36..755 /gene="VSX1" /note="truncated protein; lacks part of helix 3 of the homeodomain; alternatively spliced" /codon_start=1 /product="homeodomain protein RINX, S1 isoform" /protein_id="AAF99657.1" /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVSGVPFLRS KDTTENVSFPHSVSQSAVPSL" BASE COUNT 201 a 304 c 267 g 177 t ORIGIN 1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg 61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc 121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc 181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg 241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg 301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc 361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc 421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag 481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga 541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc 601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac 661 aggtgtctgg ggtccctttt ctccgctcca aagataccac agagaacgtg tcattcccac 721 attcagtgag ccaatcagca gtcccttctc tatagccaac acgctccctt tgcatagaaa 781 ctgagggtcc cttagctgaa ggcaccacaa gagcttgccc ctatgaccct catgcctttt 841 ttcattttat tattatttag tatcaaatca ttctttaaaa tcacatgata atgtgtgcag 901 caactagaaa ctataaagat atgtcaacga aaaaaaaaaa aaaaaaaaa //