LOCUS       AF251034                 949 bp    mRNA    linear   HUM 15-AUG-2000
DEFINITION  Homo sapiens homeodomain protein RINX, isoform S1 (VSX1) mRNA,
            complete cds, alternatively spliced.
ACCESSION   AF251034
VERSION     AF251034.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 949)
  AUTHORS   Hayashi,T., Huang,J. and Deeb,S.S.
  TITLE     RINX(VSX1), a novel homeobox gene expressed in the inner nuclear
            layer of the adult retina
  JOURNAL   Genomics 67 (2), 128-139 (2000)
   PUBMED   10903837
REFERENCE   2  (bases 1 to 949)
  AUTHORS   Deeb,S.S., Hayashi,T. and Huang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-APR-2000) Medicine and Genetics, University of
            Washington, Box 357360, 1705 NE Pacific St., Seattle, WA
            98195-7720, USA
FEATURES             Location/Qualifiers
     source          1..949
                     /db_xref="H-InvDB:HIT000075033"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
                     /map="20p11.2"
                     /clone="S1"
                     /tissue_type="retina"
                     /dev_stage="adult"
     gene            1..949
                     /gene="VSX1"
                     /note="RINX"
     CDS             36..755
                     /gene="VSX1"
                     /note="truncated protein; lacks part of helix 3 of the
                     homeodomain; alternatively spliced"
                     /codon_start=1
                     /product="homeodomain protein RINX, S1 isoform"
                     /protein_id="AAF99657.1"
                     /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP
                     APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL
                     LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG
                     KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVSGVPFLRS
                     KDTTENVSFPHSVSQSAVPSL"
BASE COUNT          201 a          304 c          267 g          177 t
ORIGIN      
        1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg
       61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc
      121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc
      181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg
      241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg
      301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc
      361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc
      421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag
      481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga
      541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc
      601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac
      661 aggtgtctgg ggtccctttt ctccgctcca aagataccac agagaacgtg tcattcccac
      721 attcagtgag ccaatcagca gtcccttctc tatagccaac acgctccctt tgcatagaaa
      781 ctgagggtcc cttagctgaa ggcaccacaa gagcttgccc ctatgaccct catgcctttt
      841 ttcattttat tattatttag tatcaaatca ttctttaaaa tcacatgata atgtgtgcag
      901 caactagaaa ctataaagat atgtcaacga aaaaaaaaaa aaaaaaaaa
//