LOCUS       AF251033                1956 bp    mRNA    linear   HUM 15-AUG-2000
DEFINITION  Homo sapiens homeodomain protein RINX, isoform L1 (VSX1) mRNA,
            complete cds, alternatively spliced.
ACCESSION   AF251033
VERSION     AF251033.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1956)
  AUTHORS   Hayashi,T., Huang,J. and Deeb,S.S.
  TITLE     RINX(VSX1), a novel homeobox gene expressed in the inner nuclear
            layer of the adult retina
  JOURNAL   Genomics 67 (2), 128-139 (2000)
   PUBMED   10903837
REFERENCE   2  (bases 1 to 1956)
  AUTHORS   Deeb,S.S., Hayashi,T. and Huang,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-APR-2000) Medicine and Genetics, University of
            Washington, Box 357360, 1705 NE Pacific St., Seattle, WA
            98195-7720, USA
FEATURES             Location/Qualifiers
     source          1..1956
                     /db_xref="H-InvDB:HIT000075032"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
                     /map="20p11.2"
                     /clone="L1"
                     /tissue_type="retina"
                     /dev_stage="adult"
     gene            1..1956
                     /gene="VSX1"
                     /note="RINX"
     CDS             36..1133
                     /gene="VSX1"
                     /note="alternatively spliced"
                     /codon_start=1
                     /product="homeodomain protein RINX, L1 isoform"
                     /protein_id="AAF99656.1"
                     /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP
                     APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL
                     LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG
                     KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK
                     WRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSM
                     GMIRKPGSEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQ
                     ETKKVHPGAGAQGGSNSTALEGPQPGKVGAT"
BASE COUNT          470 a          493 c          537 g          456 t
ORIGIN      
        1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg
       61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc
      121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc
      181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg
      241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg
      301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc
      361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc
      421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag
      481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga
      541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc
      601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac
      661 aggtctggtt tcaaaaccgc agggccaaat ggcgcaagcg ggagaagcgc tggggcggca
      721 gcagcgtgat ggccgagtac gggctgtacg gggccatggt gcgccactgc atcccgctgc
      781 cagactccgt gctcaactcc gccgagggcg gcctgctggg ctcctgcgcg ccctggctcc
      841 tggggatgca taaaaaatcc atggggatga taaggaagcc aggaagtgaa gataagttgg
      901 caggactctg gggctctgac cacttcaaag aaggttctag ccagagtgag tcaggatcac
      961 agagaggctc agataaagtg agccctgaga atggcttgga agatgtggct attgacctct
     1021 ccagctctgc ccggcaggag accaagaaag tgcaccctgg ggctggtgct caaggaggct
     1081 ccaactccac ggcactggag gggccccagc cagggaaggt gggagccaca tgagacccac
     1141 aggtcccact gtcaaaggct gaaaatgtgc atattcctca ctggcatttt ccaaaagaca
     1201 aaaattgtcc aagacatgta ctctcagttt gattttcttc tgacaatgtc aagataaaat
     1261 gcaatgccac ttgctttaag aggacagatg agtgacctag ggaaaattct atttcactct
     1321 agaatggaaa cggttcctta atggcacttt aaccagttaa cttggtgcaa aacttttgat
     1381 tctcttttgt agcttgagca gggaggatcc gaagttcaaa aatgatttca ctgctgggca
     1441 tcatttgaga tgtgtggttc aatgtactgt atagatgaat aggttaggtc tgatgtcctc
     1501 attctcaatt aggaaatata aaattgttta atatccagaa gaatctgata tcatcatagt
     1561 gaagactcca tacagacaca tgaatgaatt atattgtctt taccttgaac ttggccttgg
     1621 atatttcagt tttcttgtta gggagtaatt ttgtgttttc ttgagtgtca cttgataggc
     1681 tatgcatatt ggaattcaaa gaaacccata ctctagtcgt ttctgcattt cctttaaaaa
     1741 tagcatggga tcatatttaa acaattgttg gatagctgga aacagtgttt ttaggtcaga
     1801 ccaggctttt ggcctttcaa aatttgtgat tgaaagcact ttagtgactt ggattttgta
     1861 aatctttcct ttcctgcgtt tcctttgcca tttatttatt ctttaaaaat aaacattttg
     1921 tggtgtgtcc aaaaaaaaaa aaaaaaaaaa aaaaaa
//