LOCUS AF251033 1956 bp mRNA linear HUM 15-AUG-2000 DEFINITION Homo sapiens homeodomain protein RINX, isoform L1 (VSX1) mRNA, complete cds, alternatively spliced. ACCESSION AF251033 VERSION AF251033.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1956) AUTHORS Hayashi,T., Huang,J. and Deeb,S.S. TITLE RINX(VSX1), a novel homeobox gene expressed in the inner nuclear layer of the adult retina JOURNAL Genomics 67 (2), 128-139 (2000) PUBMED 10903837 REFERENCE 2 (bases 1 to 1956) AUTHORS Deeb,S.S., Hayashi,T. and Huang,J. TITLE Direct Submission JOURNAL Submitted (03-APR-2000) Medicine and Genetics, University of Washington, Box 357360, 1705 NE Pacific St., Seattle, WA 98195-7720, USA FEATURES Location/Qualifiers source 1..1956 /db_xref="H-InvDB:HIT000075032" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="20" /map="20p11.2" /clone="L1" /tissue_type="retina" /dev_stage="adult" gene 1..1956 /gene="VSX1" /note="RINX" CDS 36..1133 /gene="VSX1" /note="alternatively spliced" /codon_start=1 /product="homeodomain protein RINX, L1 isoform" /protein_id="AAF99656.1" /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK WRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSM GMIRKPGSEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQ ETKKVHPGAGAQGGSNSTALEGPQPGKVGAT" BASE COUNT 470 a 493 c 537 g 456 t ORIGIN 1 tccagagagg ctcgcgcctt gcttgctaag gaaccatgac cggccgggac tcgctttccg 61 acgggcgcac tagcagcagg gcgctggtgc ctggcggttc ccctaggggc tcgcgccccc 121 ggggcttcgc catcacggac ctgctgggct tggaggccga gctgccggcg cccgctggcc 181 caggacaggg atctggctgc gagggtccgg cagtcgcgcc gtgcccgggc ccggggcttg 241 acggctccag cctggcgcgt ggggccctac cgctgggact cggcctcctc tgtggcttcg 301 gcacgcagcc gccggcggcc gctcgagcac cctgcctgct cctagcggac gtgccgttcc 361 tgccgcccag gggccccgag cccgctgccc cgctggctcc cagccgtccg ccgcctgcgc 421 tcggccgcca gaagcgcagc gacagcgtct ccacgtccga tgaggacagc cagtctgaag 481 acaggaatga cctaaaggca tcccccacct tgggcaagag gaagaagcgg cggcacagga 541 cagttttcac tgctcaccag ctggaagagt tggagaaggc attcagcgag gcccactacc 601 ctgatgtgta tgcccgagaa atgctggctg tgaaaactga gctccccgaa gaccggatac 661 aggtctggtt tcaaaaccgc agggccaaat ggcgcaagcg ggagaagcgc tggggcggca 721 gcagcgtgat ggccgagtac gggctgtacg gggccatggt gcgccactgc atcccgctgc 781 cagactccgt gctcaactcc gccgagggcg gcctgctggg ctcctgcgcg ccctggctcc 841 tggggatgca taaaaaatcc atggggatga taaggaagcc aggaagtgaa gataagttgg 901 caggactctg gggctctgac cacttcaaag aaggttctag ccagagtgag tcaggatcac 961 agagaggctc agataaagtg agccctgaga atggcttgga agatgtggct attgacctct 1021 ccagctctgc ccggcaggag accaagaaag tgcaccctgg ggctggtgct caaggaggct 1081 ccaactccac ggcactggag gggccccagc cagggaaggt gggagccaca tgagacccac 1141 aggtcccact gtcaaaggct gaaaatgtgc atattcctca ctggcatttt ccaaaagaca 1201 aaaattgtcc aagacatgta ctctcagttt gattttcttc tgacaatgtc aagataaaat 1261 gcaatgccac ttgctttaag aggacagatg agtgacctag ggaaaattct atttcactct 1321 agaatggaaa cggttcctta atggcacttt aaccagttaa cttggtgcaa aacttttgat 1381 tctcttttgt agcttgagca gggaggatcc gaagttcaaa aatgatttca ctgctgggca 1441 tcatttgaga tgtgtggttc aatgtactgt atagatgaat aggttaggtc tgatgtcctc 1501 attctcaatt aggaaatata aaattgttta atatccagaa gaatctgata tcatcatagt 1561 gaagactcca tacagacaca tgaatgaatt atattgtctt taccttgaac ttggccttgg 1621 atatttcagt tttcttgtta gggagtaatt ttgtgttttc ttgagtgtca cttgataggc 1681 tatgcatatt ggaattcaaa gaaacccata ctctagtcgt ttctgcattt cctttaaaaa 1741 tagcatggga tcatatttaa acaattgttg gatagctgga aacagtgttt ttaggtcaga 1801 ccaggctttt ggcctttcaa aatttgtgat tgaaagcact ttagtgactt ggattttgta 1861 aatctttcct ttcctgcgtt tcctttgcca tttatttatt ctttaaaaat aaacattttg 1921 tggtgtgtcc aaaaaaaaaa aaaaaaaaaa aaaaaa //