LOCUS AH009820 5002 bp DNA linear ROD 10-JUN-2016
DEFINITION Mus musculus strain 129/Sv leukocyte cell-surface molecule (Ly9)
gene, complete cds.
ACCESSION AH009820 AF245117 AF245118 AF245506 AF245507 AF245508 AF245509
AF245510 AF246699 AF246700 AF246701
VERSION AH009820.2
KEYWORDS .
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 5002)
AUTHORS Tovar,V., de la Fuente,M.A., Pizcueta,P., Bosch,J. and Engel,P.
TITLE Gene structure of the mouse leukocyte cell surface molecule Ly9
JOURNAL Immunogenetics 51 (10), 788-793 (2000)
PUBMED 10970093
REFERENCE 2 (bases 1 to 5002)
AUTHORS Tovar,V., de la Fuente,M.A. and Engel,P.
TITLE Direct Submission
JOURNAL Submitted (14-MAR-2000) Immunology Unit, University of Barcelona,
Casanova 143, Barcelona 08036, Spain
REFERENCE 3 (bases 4633 to 5002)
AUTHORS Tovar,V., de la Fuente,M.A. and Engel,P.
TITLE Direct Submission
JOURNAL Submitted (15-SEP-2000) Immunology Unit, University of Barcelona,
Casanova 143, Barcelona 08036, Spain
REMARK Amino acid sequence updated by submitter
COMMENT On or before Jun 10, 2016 this sequence version replaced
AF245117.1, AF245506.1, AF245118.1, AF245507.1, AF245508.1,
AF245509.1, AF245510.1, AF246699.1, AF246700.1, AF246701.1,
AH009820.1.
FEATURES Location/Qualifiers
source 1..5002
/organism="Mus musculus"
/mol_type="genomic DNA"
/strain="129/Sv"
/db_xref="taxon:10090"
/chromosome="1"
/tissue_type="liver"
gene <1517..>5002
/gene="Ly9"
mRNA join(<1517..1640,1761..2090,2231..2506,2651..2989,
3131..3400,3540..3638,3771..3824,3966..4300,4441..4512,
4653..>4718)
/gene="Ly9"
/product="leukocyte cell-surface molecule"
CDS join(1517..1640,1761..2090,2231..2506,2651..2989,
3131..3400,3540..3638,3771..3824,3966..4300,4441..4512,
4653..4718)
/gene="Ly9"
/codon_start=1
/product="leukocyte cell-surface molecule"
/protein_id="AAG13268.2"
/translation="MADLKRYWCDWALSPLSENPRMSQQQIFSPILWIPLLFLLMGLG
ASGKETPPTVISGMLGGSVTFSLNISKDAEIEHIIWNCPPKALALVSYKKDITILDKG
YNGRLKVSEDGYSLYMSNLTKSDSGSYYAQINQKNVTLTTNKEFTLHIYEKLQKPQII
VESVTPSDTDSCTFTLICTVKGTKDSVQYSWTREDTHLNTYDGSHTLRVSQSVCDPDL
PYTCKAWNPVSQNSSQPVRIWQFCTGASRRKTAAGKTVVGILGEPVTLPLEFRATRAT
KNVVWVFNTSVISQERRGAATADSRRKPKGSEERRVRTSDQDQSLKISQLKMEDAGPY
HAYVCSEASRDPSVRHFTLLVYKRLEKPSVTNSPVHMMNGICKVVLTCSVDGGGNNVT
YTWMPLQNKAVMSQGKSHLNVSWESGEHLPNFTCTAHNPVSNSSSQFSSGTICSGPER
NKRFWLLLLLVLLLLMLIGGYFILRKKKQCSSLATRYRQAEVPAEIPETPTGHGQFSV
LSQRYEKLDMSAKTTRHQPTPTSDTSSESSATTEEDDEKTRIHSTANSRNQVYDLVTH
QDIAHALAYEGQVEYEAITPYDKVDESMDEEDMAYIQVSLNVQGETPLPQKKEDSNTI
YCSVQKPKKTAQTPQQDAESPETPTYENFT"
exon <1517..1640
/gene="Ly9"
/number=1
gap 1641..1740
/estimated_length=unknown
exon 1761..2110
/gene="Ly9"
/number=2
gap 2111..2210
/estimated_length=unknown
exon 2231..2506
/gene="Ly9"
/number=3
gap 2527..2626
/estimated_length=unknown
exon 2651..2989
/gene="Ly9"
/number=4
gap 3010..3109
/estimated_length=unknown
exon 3131..3400
/gene="Ly9"
/number=5
gap 3422..3521
/estimated_length=unknown
exon 3540..3638
/gene="Ly9"
/number=6
gap 3659..3758
/estimated_length=unknown
exon 3771..3824
/gene="Ly9"
/number=7
gap 3845..3944
/estimated_length=unknown
exon 3966..4300
/gene="Ly9"
/number=8
gap 4321..4420
/estimated_length=unknown
exon 4441..4512
/gene="Ly9"
/number=9
gap 4533..4632
/estimated_length=unknown
exon 4653..>4718
/gene="Ly9"
/number=10
BASE COUNT 1244 a 1012 c 821 g 1025 t
ORIGIN
1 ggatccaaaa tcctgaggca tgatggaaag atatggaaaa ctcaagaaag ggtgacttca
61 ctgggtataa gtcatctcac ccatctcata caggctaaga gccaaaaatc tcaacacagc
121 tcatgaaacc acttgtaaga tgacctgcaa aggatttatg ttcccctttc tcagaaaata
181 ccacaaccaa gattcttaag acaattaatg aatcatgctt acagtcaaaa tacaatgttg
241 acctctgtgc cacccacaca cagagggaat acccttgagt cttgtggtct atgttcttat
301 cttgtcaata ttcctttctt atctggaaac cgacacaatg aaagttacac accacctcat
361 aatctcatct acaaaaggaa aatgttttag ataaaatatg cataccagaa tatttttact
421 tactctttaa ccccatgtat agcctgtatg gttcaaacaa tgtaactcca aaatccacaa
481 aatcagatat gtatagttac tgccaaggta ctaaggtaca catcaccctg gattccatct
541 ctcttagagt gcacattctt ttctcattta aactaacttt gcttctgact gacttgtcct
601 gaaattcttt tctgcatcat aaatcaaaat ccctgtgcat agggcagaga tattcagcca
661 catttcttga ggcactatta acaataacca acttagggac tcagcctaga tgttcatcaa
721 tagaggaaaa atgaagtata cgaacaaaac agcatttttc ttcaattata aagaaaatga
781 gacattcaag aaaatcaaca gaatcagaga tcattatatt gagggaaata ttccaggttc
841 agaaagatat tcataatttc tttcctatgt agaacctaca tgatatatat atatatatat
901 atatatatat atatatatat atatatatat ataaaatata catacacaca cacacacaca
961 cacacatgac atgaattaga ggaaggagag aagaaaatgg gggaattgga aatgggaaag
1021 aaagagatgg aagccacagc ctttctcttg tcctgtattc agaagtgaca tatcactagc
1081 tctgtcacat ctattcacta taagaagcca ctaatctcag cctgaatcca agaagaggac
1141 agtaatgtcc agaagtgagg atacttagta gacatcttta gattcatggt tagagctcat
1201 ctttgatact gaaacaagtg aagcccagca ctggtttaca atttccttgc aggatctgga
1261 tgtgcttggg acctctccct cagtctgagc agatgcagga gtctgtcgtg ctcaatataa
1321 acagctcttc ctgggacaca catgcacaca tgcacacact cacacacaca cacacacaca
1381 cacacacaca cacacacaca cacacacaca cgccacaaac cgtgcaccac aaaccacgca
1441 tgcgcgtgca ctcacatact tcaggaagtt gtggtaagtg catctccttt aatttgaaat
1501 ctggaagtac accatcatgg cggatctaaa gagatattgg tgtgactggg ctctaagtcc
1561 actctctgaa aatccaagaa tgagtcagca gcagatattt tctcccattc tttggattcc
1621 tctcctcttc ctactcatgg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1681 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1741 tccctcttct gtttccacag ggctcggagc ctctggaaag gaaacacctc caacagtgat
1801 atcagggatg ctagggggtt ctgtgacttt ctccctaaac atctcaaagg atgcagagat
1861 tgagcatatc atctggaatt gtcccccaaa ggctcttgct ttagtatcct acaaaaaaga
1921 tataactatt ctggacaaag gatataatgg cagactcaaa gtcagcgaag atggctactc
1981 cttgtacatg agcaacctaa ccaagagtga ttcaggatcc tattatgctc agataaacca
2041 aaagaatgtt accctcacca caaataaaga gttcacactg cacatctatg gtgagttcca
2101 gagagcttgg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2161 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn tgatgttgtt
2221 atcccctcag agaagctcca gaagcctcag atcatcgtgg aatctgtgac cccatccgat
2281 actgattcct gcaccttcac cctaatctgc actgtaaagg ggacaaagga cagtgtccag
2341 tacagctgga cccgagagga cacccattta aatacatacg atggaagcca caccctcagg
2401 gtttcccaga gtgtctgtga ccccgaccta ccctatacct gcaaagcctg gaatccagtc
2461 agccaaaaca gctcccaacc tgtccgcatc tggcaattct gcacaggcaa gtgacgccgc
2521 taagttnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2581 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnntctc atctctgact
2641 tcaaactcag gagcctccag aagaaaaaca gcagcgggga agactgtggt aggaatcctg
2701 ggagagccag tgaccctgcc cttggaattt cgggccactc gggccacaaa gaatgttgtc
2761 tgggtgttta acacgtcggt tatcagccaa gaacggagag gagcagcaac agcggattct
2821 cgccgtaagc ccaaaggttc tgaagaaagg agggtgagga cctctgacca ggaccaatcc
2881 ctgaagatca gccagctgaa gatggaggac gcgggcccct accatgccta tgtgtgctca
2941 gaggcctccc gagaccccag tgtgagacat ttcaccttgc ttgtctacag tgagtacccc
3001 ttgccagctn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3061 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnc tgttctttcc
3121 ccccacatag agagactgga gaagcccagt gtcaccaaca gtcctgtgca catgatgaac
3181 ggaatctgca aggttgtcct gacctgttca gtggacggtg gtggaaacaa tgtgacatac
3241 acatggatgc ctctacaaaa caaagctgtc atgtcccaag ggaagtcgca cctcaatgtc
3301 tcctgggaaa gtggtgaaca cctgcccaac ttcacatgca cagcccataa ccctgtcagc
3361 aacagctcca gccagttttc ttctgggacc atctgttcag gtctgtccct ccccctcctt
3421 cnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3481 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nttttttttt ctcttcaagg
3541 ccctgagaga aacaagaggt tttggctcct gctcctcctg gttttgctct tgttgatgct
3601 cattggcggt tacttcattt tgaggaaaaa gaagcagtgt aaatgtgcta aattcactnn
3661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3721 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnntt ggtttctcag gttcgtcttt
3781 ggccaccagg tacagacaag cggaggtccc agctgaaata ccaggtaata tcatcagtaa
3841 ctcannnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3901 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnccctgc agaattgagt
3961 tctagaaacc ccaactggcc atggacaatt ttctgtgctc tcccaacggt atgagaaact
4021 agacatgtct gctaagacca ccaggcatca gcctacaccc acctcagata ccagctctga
4081 gagcagcgca acaacagaag aggatgacga aaagaccaga attcacagca ctgctaatag
4141 tagaaatcag gtgtatgact tggtcaccca tcaggacatt gcacatgcct tggcctatga
4201 ggggcaagta gaatatgaag caatcactcc atatgataaa gtggatgagt ctatggatga
4261 agaggacatg gcatatatac aagtgtccct gaatgtgcag gtgagcattt ctaactagca
4321 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn taatatgata cctgttacag
4441 ggagagaccc cacttcctca gaagaaagaa gactcaaata caatctactg ctctgtgcag
4501 aagcctaaaa aggtgagaac aatttttccc aannnnnnnn nnnnnnnnnn nnnnnnnnnn
4561 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
4621 nnnnnnnnnn nngttctttt taactcatcc agacggcaca aacaccacag caagacgctg
4681 agtctcctga aacccctacc tatgaaaatt tcacctgaag ggaaaagcgg ctgctacttc
4741 tggggtgagg atttggagaa aaacagacat cataaatcct cctgtttctg cagaaaggac
4801 acatcggaat ttcctgccat ggcttagact agcctgaatt tgatgccttc ctcttcttgt
4861 catcctcctt accccatgag cccattcaca ggtcaggcag agtctccttg gagcctacag
4921 gctttgaaca ccctgccttt ggatctcttt ttcttatctg gactgccttg tctgcctcag
4981 tgggggagga tgcacttagt cc
//