LOCUS AF152481 2475 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin alpha 3 short form protein (PCDH-alpha3)
variable region sequence, complete cds.
ACCESSION AF152481
VERSION AF152481.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2475)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2475)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2475)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2475
/db_xref="H-InvDB:HIT000071785"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2475
/gene="PCDH-alpha3"
CDS 1..2475
/gene="PCDH-alpha3"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin alpha 3 short form protein"
/protein_id="AAD43742.1"
/translation="MLFSWREDPGAQCLLLSLLLLAASEVGSGQLHYSVSEEAKHGTF
VGRIAQDLGLELAELVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSAEC
SIHLEVIVDRPLQVFHVEVEVKDINDNAPVFPMAVKNLFISESRQPGSRFSLEGASDA
DIGTNSLLTYSLDSTEYFTLDVKRNDEEIKSLGLVLKKNLNREDTPKHYLLITAIDGG
KPELTGTTQLKITVLDVNDNAPAFERTIYKVRLLENAPNGTLVVTVNATDLDEGVNKD
IAYSFNTDMSADILSKFHLDPVNGQISVKGNIDFEESKSYEIQVEATDKGNPPMSDHC
TVLLEIVDINDNVPELVIQSLSLPVLEDSPLSTVIALISVSDRDSGVNGQVTCSLTPH
VPFKLVSTFKNYYSLVLDSPLDRESVSAYELVVTARDGGSPSLWATASVSVEVADVND
NAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVGERALSSYV
SVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALL
MPRVGGIGGAVSELVPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPGTGGARIPFRV
GLYTGEISTTRALDEVDAPRHRLLVLVKDHGEPSLTATATVLVSLVESGQAPKASSQA
SAGATGPEAALVDVNVYLIVAICAVSSLLVLTLLLYTALRCSAPPTEGDCGPGKPTLV
CSSAVGSWSYSQQRQQRVCSGEGLPKTDLMAFSPSLPPCPISRDREEKQDVDVDLSAK
VSNFYLFFPKCLCFSFLNVSTPLEIH"
BASE COUNT 539 a 639 c 745 g 552 t
ORIGIN
1 atgttgttct cctggcgaga agatcctgga gcccagtgcc tgctgctttc tcttctgctc
61 ctcgcagcct cggaggtggg gagcggccag ctccactact ccgtctctga ggaggccaag
121 catggcacct tcgtgggccg catcgcgcag gacctggggc tggagctggc ggagctggtg
181 ccgcgcctgt tccgggtggc gtccaaaaga cacggggacc ttctggaggt aaatctgcag
241 aatggcattt tgtttgtgaa ttctcggata gaccgcgagg aactgtgcgg gcggagcgcg
301 gagtgcagca tccacctgga ggtgatcgtg gacaggccgc tgcaggtttt ccatgtggag
361 gtggaagtga aggacattaa tgacaacgcg ccagtttttc caatggctgt aaagaatctg
421 tttatttccg aatcccgaca gcctggctct cggttttcgc tagagggcgc atcagatgca
481 gatatcggaa caaattcgtt gttgacttac agtcttgatt ccactgaata ttttaccttg
541 gacgttaaaa gaaatgatga ggaaattaaa tcccttggac tcgtgttgaa aaaaaattta
601 aatcgagagg acactcctaa gcattattta ctaataacag caattgatgg tgggaaacca
661 gagctcactg gcacgactca actaaagatc actgttttag atgtaaacga caacgcccca
721 gcgtttgaga ggacgatcta taaagtcaga ttactcgaaa atgcaccaaa tggtacccta
781 gtggtgaccg ttaacgccac cgatttggat gaaggagtaa ataaggatat cgcgtattct
841 ttcaatacgg acatgtcagc agatattctg tcaaaattcc atttagatcc agtcaatgga
901 caaatcagtg taaagggtaa catagatttc gaggaaagta agtcatatga aatccaggta
961 gaagccacgg ataaaggaaa tcccccaatg tcagatcact gcacagttct actcgaaatt
1021 gtggacatca atgataatgt acctgagtta gttattcaat cactatcttt acctgtatta
1081 gaagactctc cacttagcac agtcatcgct ctgatcagcg tgtccgaccg cgactcagga
1141 gtcaatggac aggtcacctg ctcgctgacg ccccacgtcc ccttcaagct ggtgtccacc
1201 ttcaagaatt actactcatt ggtgctggac agccctctgg accgcgagag cgtgtcggcc
1261 tatgagctgg tggtgactgc tcgggacggg ggctcgcctt cactgtgggc cacggccagc
1321 gtgtccgtgg aggtggccga cgtgaacgac aatgcgccgg cattctcgca gtccgagtac
1381 acggtgttcg tgaaggagaa caacccgccg ggctgccaca tcttcacggt gtctgcgcgg
1441 gacgcggacg cgcaggagaa cgccctggtg tcctactcgc tggtggaacg gcgggtgggg
1501 gagcgcgcgc tgtcgagcta cgtgtcggta cacgcggaga gcggcaaggt gtacgcgctg
1561 cagccgctgg accacgagga gctagagctg ctgcagttcc aggtgagtgc gcgcgatgcg
1621 ggcgtgccgc ctctgggcag caacgtgacg ctgcaggtgt tcgtgctgga cgagaacgac
1681 aacgcgccgg cactgctgat gcctcgggtg ggtggcatcg gtggcgcagt gagcgagctg
1741 gtgccgcggt cagtgggtgc gggccacgtg gtagcgaagg tgcgcgcagt ggatgcagac
1801 tcaggctaca acgcgtggct ttcgtatgag ctgcagcctg ggaccggcgg tgcgcgcatc
1861 ccgtttcgcg tggggctgta cacgggagag atcagcacga cccgtgccct ggacgaggtg
1921 gacgccccgc gccatcgcct actggtgctg gtgaaggacc acggtgaacc ctcattgacc
1981 gccacggcca ctgtgctggt gtcgctggtg gagagtggcc aggcacccaa ggcctcgtcc
2041 caggcgtccg ctggcgccac gggcccggaa gctgcactgg tggatgtcaa cgtgtacttg
2101 atcgtcgcca tctgcgcggt gtccagtctg ttggtgctca cactgctgct atatactgct
2161 ctgcggtgct ccgcgccgcc aaccgaaggc gactgtgggc cgggcaagcc cacgctggtg
2221 tgctccagcg cggtggggag ctggtcatac tcgcagcaga ggcagcagag ggtgtgctct
2281 ggagaggggt tgcccaagac cgacctcatg gcttttagcc ctagccttcc tccttgtcca
2341 attagccggg atagagagga gaaacaggat gtggacgttg atctctcagc caaagtgagt
2401 aatttttatt tattctttcc aaaatgtctt tgtttttcat tcctcaatgt ttccactcct
2461 ctggaaatac attaa
//