LOCUS AF095844 3380 bp mRNA linear HUM 23-JAN-2002 DEFINITION Homo sapiens melanoma differentiation associated protein-5 (MDA5) mRNA, complete cds. ACCESSION AF095844 VERSION AF095844.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3380) AUTHORS Kang,D.C., Gopalkrishnan,R.V., Wu,Q., Jankowsky,E., Pyle,A.M. and Fisher,P.B. TITLE mda-5: An interferon-inducible putative RNA helicase with double-stranded RNA-dependent ATPase activity and melanoma growth-suppressive properties JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (2), 637-642 (2002) PUBMED 11805321 REFERENCE 2 (bases 1 to 3380) AUTHORS Kang,D.-C. and Fisher,P.B. TITLE Direct Submission JOURNAL Submitted (30-SEP-1998) Urology, Columbia University, P&S, 630 W168th, New York, NY 10032, USA FEATURES Location/Qualifiers source 1..3380 /db_xref="H-InvDB:HIT000068449" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="HO-1" /tissue_type="melanoma" gene 1..3380 /gene="MDA5" CDS 169..3246 /gene="MDA5" /codon_start=1 /product="melanoma differentiation associated protein-5" /protein_id="AAG34368.1" /translation="MSNGYSTDENFRYLISCFRARVKMYIQVEPVLDYLTFLPAEVKE QIQRTVATSGNMQAVELLLSTLEKGVWHLGWTREFVEALRRTGSPLAARYMNPELTDL PSPSFENAHDEYLQLLNLLQPTLVDKLLVRDVLDKCMEEELLTIEDRNRIAAAENNGN ESGVRELLKRIVQKENWFSAFLNVLRQTGNNELVQELTGSDCSESNAEIENLSQVDGP QVEEQLLSTTVQPNLEKEVWGMENNSSESSFADSSVVSESDTSLAEGSVSCLDESLGH NSNMGSDSGTMGSDSDEENVAARASPEPELQLRPYQMEVAQPALEGKNIIICLPTGSG KTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEFQPFLKKWYRVIGLSG DTQLKISFPEVVKSCDIIISTAQILENSLLNLENGEDAGVQLSDFSLIIIDECHHTNK EAVYNNIMRHYLMQKLKNNRLKKENKPVIPLPQILGLTASPGVGGATKQAKAEEHILK LCANLDAFTIKTVKENLDQLKNQIQEPCKKFAIADATREDPFKEKLLEIMTRIQTYCQ MSPMSDFGTQPYEQWAIQMEKKAAKKGNRKERVCAEHLRKYNEALQINDTIRMIDAYT HLETFYNEEKDKKFAVIEDDSDEGGDDEYCDGDEDEDDLKKPLKLDETDRFLMTLFFE NNKMLKRLAENPEYENEKLTKLRNTIMEQYTRTEESARGIIFTKTRQSAYALSQWITE NEKFAEVGVKAHHLIGAGHSSEFKPMTQNEQKEVISKFRTGKINLLIATTVAEEGLDI KECNIVIRYGLVTNEIAMVQARGRARADESTYVLVAHSGSGVIEHETVNDFREKMMYK AIHCVQNMKPEEYAHKILELQMQSIMEKKMKTKRNIAKHYKNNPSLITFLCKNCSVLA CSGEDIHVIEKMHHVNMTPEFKELYIVRENKALQKKCADYQINGEIICKCGQAWGTMM VHKGLDLPCLKIRNFVVVFKNNSTKKQYKKWVELPITFPNLDYSECCLFSDED" BASE COUNT 1153 a 644 c 753 g 830 t ORIGIN 1 gcgcgccggc ctgagagccc tgtggacaac ctcgtcattg tcaggcacag agcggtagac 61 cctgcttctc taagtgggca gcggacagcg gcacgcacat ttcacctgtc ccgcagacaa 121 cagcaccatc tgcttgggag aaccctctcc cttctctgag aaagaaagat gtcgaatggg 181 tattccacag acgagaattt ccgctatctc atctcgtgct tcagggccag ggtgaaaatg 241 tacatccagg tggagcctgt gctggactac ctgacctttc tgcctgcaga ggtgaaggag 301 cagattcaga ggacagtcgc cacctccggg aacatgcagg cagttgaact gctgctgagc 361 accttggaga agggagtctg gcaccttggt tggactcggg aattcgtgga ggccctccgg 421 agaaccggca gccctctggc cgcccgctac atgaaccctg agctcacgga cttgccctct 481 ccatcgtttg agaacgctca tgatgaatat ctccaactgc tgaacctcct tcagcccact 541 ctggtggaca agcttctagt tagagacgtc ttggataagt gcatggagga ggaactgttg 601 acaattgaag acagaaaccg gattgctgct gcagaaaaca atggaaatga atcaggtgta 661 agagagctac taaaaaggat tgtgcagaaa gaaaactggt tctctgcatt tctgaatgtt 721 cttcgtcaaa caggaaacaa tgaacttgtc caagagttaa caggctctga ttgctcagaa 781 agcaatgcag agattgagaa tttatcacaa gttgatggtc ctcaagtgga agagcaactt 841 ctttcaacca cagttcagcc aaatctggag aaggaggtct ggggcatgga gaataactca 901 tcagaatcat cttttgcaga ttcttctgta gtttcagaat cagacacaag tttggcagaa 961 ggaagtgtca gctgcttaga tgaaagtctt ggacataaca gcaacatggg cagtgattca 1021 ggcaccatgg gaagtgattc agatgaagag aatgtggcag caagagcatc cccggagcca 1081 gaactccagc tcaggcctta ccaaatggaa gttgcccagc cagccttgga agggaagaat 1141 atcatcatct gcctccctac agggagtgga aaaaccagag tggctgttta cattgccaag 1201 gatcacttag acaagaagaa aaaagcatct gagcctggaa aagttatagt tcttgtcaat 1261 aaggtactgc tagttgaaca gctcttccgc aaggagttcc aaccattttt gaagaaatgg 1321 tatcgtgtta ttggattaag tggtgatacc caactgaaaa tatcatttcc agaagttgtc 1381 aagtcctgtg atattattat cagtacagct caaatccttg aaaactccct cttaaacttg 1441 gaaaatggag aagatgctgg tgttcaattg tcagactttt ccctcattat cattgatgaa 1501 tgtcatcaca ccaacaaaga agcagtgtat aataacatca tgaggcatta tttgatgcag 1561 aagttgaaaa acaatagact caagaaagaa aacaaaccag tgattcccct tcctcagata 1621 ctgggactaa cagcttcacc tggtgttgga ggggccacga agcaagccaa agctgaagaa 1681 cacattttaa aactatgtgc caatcttgat gcatttacta ttaaaactgt taaagaaaac 1741 cttgatcaac tgaaaaacca aatacaggag ccatgcaaga agtttgccat tgcagatgca 1801 accagagaag atccatttaa agagaaactt ctagaaataa tgacaaggat tcaaacttat 1861 tgtcaaatga gtccaatgtc agattttgga actcaaccct atgaacaatg ggccattcaa 1921 atggaaaaaa aagctgcaaa aaaaggaaat cgcaaagaac gtgtttgtgc agaacatttg 1981 aggaagtaca atgaggccct acaaattaat gacacaattc gaatgataga tgcgtatact 2041 catcttgaaa ctttctataa tgaagagaaa gataagaagt ttgcagtcat agaagatgat 2101 agtgatgagg gtggtgatga tgagtattgt gatggtgatg aagatgagga tgatttaaag 2161 aaacctttga aactggatga aacagataga tttctcatga ctttattttt tgaaaacaat 2221 aaaatgttga aaaggctggc tgaaaaccca gaatatgaaa atgaaaagct gaccaaatta 2281 agaaatacca taatggagca atatactagg actgaggaat cagcacgagg aataatcttt 2341 acaaaaacac gacagagtgc atatgcgctt tcccagtgga ttactgaaaa tgaaaaattt 2401 gctgaagtag gagtcaaagc ccaccatctg attggagctg gacacagcag tgagttcaaa 2461 cccatgacac agaatgaaca aaaagaagtc attagtaaat ttcgcactgg aaaaatcaat 2521 ctgcttatcg ctaccacagt ggcagaagaa ggtctggata ttaaagaatg taacattgtt 2581 atccgttatg gtctcgtcac caatgaaata gccatggtcc aggcccgtgg tcgagccaga 2641 gctgatgaga gcacctacgt cctggttgct cacagtggtt caggagttat cgaacatgag 2701 acagttaatg atttccgaga gaagatgatg tataaagcta tacattgtgt tcaaaatatg 2761 aaaccagagg agtatgctca taagattttg gaattacaga tgcaaagtat aatggaaaag 2821 aaaatgaaaa ccaagagaaa tattgccaag cattacaaga ataacccatc actaataact 2881 ttcctttgca aaaactgcag tgtgctagcc tgttctgggg aagatatcca tgtaattgag 2941 aaaatgcatc acgtcaatat gaccccagaa ttcaaggaac tttacattgt aagagaaaac 3001 aaagcactgc aaaagaagtg tgccgactat caaataaatg gtgaaatcat ctgcaaatgt 3061 ggccaggctt ggggaacaat gatggtgcac aaaggcttag atttgccttg tctcaaaata 3121 aggaattttg tagtggtttt caaaaataat tcaacaaaga aacaatacaa aaagtgggta 3181 gaattaccta tcacatttcc caatcttgac tattcagaat gctgtttatt tagtgatgag 3241 gattagcact tgattgaaga ttcttttaaa atactatcag ttaaacattt aatatgatta 3301 tgattaatgt attcattatg ctacagaact gacataagaa tcaataaaat gattgtttta 3361 ctctgaaaaa aaaaaaaaaa //