LOCUS AF003949 1701 bp mRNA linear VRT 05-JAN-1999 DEFINITION Oryzias latipes tumor suppressor protein p53 (p53) mRNA, complete cds. ACCESSION AF003949 VERSION AF003949.1 KEYWORDS . SOURCE Oryzias latipes (Japanese medaka) ORGANISM Oryzias latipes Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias. REFERENCE 1 (bases 1 to 1701) AUTHORS Atkinson,D.N., Gumerlock,P.H., Wong,J.T.Y. and Hsieh,D.P.H. TITLE Isolation of cDNAs encoding the p53 tumor suppressor gene in the Japanese Medaka (Oryzias latipes) JOURNAL Unpublished REFERENCE 2 (bases 1 to 1701) AUTHORS Atkinson,D.N., Gumerlock,P.H., Wong,J.T.Y. and Hsieh,D.P.H. TITLE Direct Submission JOURNAL Submitted (13-MAY-1997) Department of Environmental Toxicology, University of California, Davis, CA 95616, USA FEATURES Location/Qualifiers source 1..1701 /organism="Oryzias latipes" /mol_type="mRNA" /strain="Himedaka" /db_xref="taxon:8090" gene 1..1701 /gene="p53" /allele="Ser" CDS 150..1208 /gene="p53" /allele="Ser" /codon_start=1 /product="tumor suppressor protein p53" /protein_id="AAD01195.1" /translation="MDPVPDLPESQGSFQELWETVSYPPLETLSLPTVNEPTGSWVAT GDMFLLDQDLSGTFDDKIFDIPIEPVPTNEVNPPPTTVPVTTDYPGSYELELRFQKSG TAKSVTSTYSETLNKLYCQLAKTSPIEVRVSKEPPKGAILRATAVYKKTEHVADVVRR CPHHQNEDSVEHRSHLIRVEGSQLAQYFEDPYTKRQSVTVPYEPPQPGSEMTTILLSY MCNSSCMGGMNRRPILTILTLETEGLVLGRRCFEVRICACPGRDRKTEEESRQKTQPK KRKVTPNTSSSKRKKSHSSGEEEDNREVFHFEVYGRERYEFLKKINDGLELLEKESKS KNKDSGMVPSSGKKLKSN" variation 421 /gene="p53" /note="this single nucleotide polymorphism results in a serine residue at amino acid 91" /replace="g" BASE COUNT 462 a 376 c 398 g 458 t ORIGIN 1 caaaatcccc aaacaacgtg ttcgacgctg cagtcgccga ttcaaaatat tttggctttt 61 ggcttttttg aaaacgtctt tccagcctct tggataataa atagcgtatt gttgtcggtg 121 cgattcccga ccatcaaagt tgggaaagca tggatcctgt acccgacctg cccgagagcc 181 aaggttcttt tcaagaactc tgggagactg ttagttatcc tccgttggaa actttatcac 241 ttccaactgt aaatgagccc accgggtcat gggtcgcaac gggggatatg tttctcttgg 301 atcaagacct cagtgggacc ttcgatgaca agatcttyga cataccgatt gagccagttc 361 ccaccaacga agtaaacccg ccaccyacca ccgtcccggt gaccaccgac tacccgggaa 421 gctacgaact ggaacttcgt tttcaaaaat ctggcactgc aaagtctgtg acgtccacat 481 actctgaaac tttaaataag ctgtactgcc agcttgcaaa aaccagcccc atagaagtcc 541 gggtgagcaa ggagcctcca aagggcgcca ttctcagggc cactgcggtc tacaagaaga 601 cggagcacgt ggcggacgtg gtgaggaggt gtccccacca ccaaaacgag gactctgtgg 661 agcaccgaag ccatctgatt cgggtggagg gcagccagct ggcccagtat tttgaagacc 721 cttataccaa aaggcagagt gttacagttc cttatgagcc cccgcagccg ggctctgaga 781 tgaccaccat cytgctyagc tacatgtgta acagctcgtg catggggggg atgaaccgca 841 gacccatcct caccatcctc actctggaaa ccgagggtct ggttcttggc cggaggtgtt 901 tygaggtcag aatctgtgct tgcccggggc gggaccgcaa aacggaggag gaaagccggc 961 agaaaacgca gcccaaaaaa aggaaggtga cacccaacac ctcctcctct aagaggaaga 1021 agtcccactc aagtggagag gaggaggaca acagagaagt ctttcatttt gaggtttatg 1081 ggagggagcg ctacgagttc cttaagaaga taaacgatgg ccttgaactg ctggaaaagg 1141 agagcaaaag taaaaacaaa gattctggga tggtcccctc cagtgggaag aagctgaaga 1201 gcaattaaag aactcatgca tggaacaatt tgatttttct wmttctactt cttggtttca 1261 taaattactt ttttacattt tttaaaattt gtactcttct ttgtaaccta tagttaattg 1321 gcatgatcag gatatttgta ggggggggtc ggctggatca cccccccaaa acggcgtttt 1381 ttgtttttgt acaagattta atgggataaa ggtaatttgt cctcagtata acaaataatg 1441 agtaggggat aaaacttcag tttgttctgt tttgagaaat aatagtgcag cactttggtt 1501 taatggacca atgttttagt tcgacactga ccacacattt agaggcattt ttgtcttcca 1561 gtatgcttat attttattat aatcttagtt ctgtatgagt ttcacactta tatatatata 1621 tgtgtatatt ttttgtcatt tgtaatgatt aacttttttt ttttgtacca aattccttgt 1681 taaataaagt ttttctgctc c //