LOCUS       AB795033                 549 bp    RNA     linear   VRL 27-SEP-2013
DEFINITION  Japanese encephalitis virus genomic RNA, 3'UTR region, partial
            sequence, strain: JEV/Bo/Miyazaki/1/2009.
ACCESSION   AB795033
VERSION     AB795033.1
KEYWORDS    .
SOURCE      Japanese encephalitis virus
  ORGANISM  Japanese encephalitis virus
            Viruses; Riboviria; Orthornavirae; Kitrinoviricota;
            Flasuviricetes; Amarillovirales; Flaviviridae; Orthoflavivirus;
            Orthoflavivirus japonicum.
REFERENCE   1  (bases 1 to 549)
  AUTHORS   Yamakawa,M. and Shirafuji,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (28-FEB-2013) to the DDBJ/EMBL/GenBank databases.
            Contact:Hiroaki Shirafuji
            National Institute of Animal Health, Kyushu Research Station; 2702
            Chuzan, Kagoshima, Kagoshima 891-0105, Japan
            URL    :http://www.naro.affrc.go.jp/niah/index.html
REFERENCE   2
  AUTHORS   Katayama,T., Saito,S., Horiuchi,S., Maruta,T., Kato,T., Yanase,T.,
            Yamakawa,M. and Shirafuji,H.
  TITLE     Nonsuppurative Encephalomyelitis in a Calf in Japan and Isolation
            of Japanese Encephalitis Virus Genotype 1 from the Affected Calf
  JOURNAL   J. Clin. Microbiol. 51, 3448-3453 (2013)
  REMARK    DOI:10.1128/JCM.00737-13
COMMENT     
FEATURES             Location/Qualifiers
     source          1..549
                     /collection_date="2009"
                     /country="Japan:Miyazaki"
                     /db_xref="taxon:11072"
                     /host="Bos taurus"
                     /mol_type="genomic RNA"
                     /organism="Japanese encephalitis virus"
                     /strain="JEV/Bo/Miyazaki/1/2009"
     3'UTR           1..>549
                     /note="3'UTR region"
BASE COUNT          152 a          132 c          163 g          102 t
ORIGIN      
        1 ataggattaa gtcatgtgtg taatgtgaga taagaaaatg tgcatgtgga gtcaggccag
       61 caaaagctgc caccggatac tgagtagacg gtgctgcctg cgtctcagtt ccaggaggac
      121 tgggttaaca aatctgacaa cggaaggtgg gaaagccctc agaaccgtct cggaagcagg
      181 tccctgctca ccggaagttg aaagaccaac gtcaggccac aattctgtgc cactccgctg
      241 gggagtgcgg cctgcgcagc cccaggagga ctgggttaac aaagccgttg aggcccccac
      301 ggcccaagcc tcgtctaaga tgcaatagac taggtgtaag gactagaggt tagaggagac
      361 cccgtggaaa caacattgtg cggcccaagc cccctcgaag ctgtagagga ggtggaagga
      421 ctagaggtta gaggagaccc cgcatttgca tcaaaacagc atattgacac ctgggaatag
      481 actgggagat ctactgctct atctcaacat cagctactag gcacagagcg ccgaagtatg
      541 tagctggtg
//