LOCUS       AB628096                 390 bp    RNA     linear   VRL 11-MAY-2011
DEFINITION  Human rhinovirus C gene for polyprotein, partial cds, strain:
            HRV/Yamaguchi/2010/89.
ACCESSION   AB628096
VERSION     AB628096.1
KEYWORDS    .
SOURCE      Human rhinovirus C
  ORGANISM  Human rhinovirus C
            Viruses; ssRNA positive-strand viruses, no DNA stage;
            Picornavirales; Picornaviridae; Enterovirus.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Kobayashi,M., Arakawa,M., Okamoto,R., Tsukagoshi,H., Ryo,A.,
            Mizuta,K., Hasegawa,S., Hirano,R., Wakiguchi,H., Kudo,K.,
            Tanaka,R., Morita,Y., Noda,M., Kozawa,K., Ichiyama,T., Shirabe,K.
            and Kimura,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (06-MAY-2011) to the DDBJ/EMBL/GenBank databases.
            Contact:Miho Kobayashi
            Gunma Prefectural Institute of Public Health and Environmental
            Sciences; Kamiokimachi 378, Maebashi, Gunma 371-0052, Japan
REFERENCE   2  
  AUTHORS   Arakawa,M., Okamoto-Nakagawa,R., Tsukagoshi,H., Kobayashi,M.,
            Ryo,A., Mizuta,K., Hasegawa,S., Hirano,R., Wakiguchi,H., Kudo,K.,
            Tanaka,R., Morita,Y., Noda,M., Kozawa,K., Ichiyama,T., Shirabe,K.
            and Kimura,H.
  TITLE     A molecular epidemiologic study of human rhinovirus species ABCs
            from the patients with severe acute respiratory illness in Japan
  JOURNAL   Unpublished (2011)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..390
                     /collection_date="14-Jan-2010"
                     /country="Japan:Yamaguchi"
                     /db_xref="taxon:463676"
                     /host="Homo sapiens"
                     /isolation_source="Nasopharyngeal swab"
                     /mol_type="genomic RNA"
                     /organism="Human rhinovirus C"
                     /strain="HRV/Yamaguchi/2010/89"
     CDS             1..>390
                     /codon_start=1
                     /product="polyprotein"
                     /protein_id="BAK22546.1"
                     /transl_table=1
                     /translation="MGAQVSKQNVGSHENSVSATGGSVIKYFNINYYKDSASSGLTKQ
                     DFSQDPSKFTQPLAEALTNPALMSPTVEACGMSDRLKQITIGNSTITTQDTLNSILAY
                     GEWPKYLSDLDASSVDKPTHPETSSDRF"
BASE COUNT          124 a           95 c           77 g           94 t
ORIGIN      
        1 atgggcgcac aggtgagcaa gcaaaatgtc ggctcgcacg aaaattcagt ctcagccacg
       61 ggtggatccg tgattaagta tttcaacatc aattactaca aggattctgc tagctctggc
      121 ttgactaaac aagatttttc ccaagaccca tcgaaattca cacaacctct agcagaagca
      181 cttacaaatc cagctttaat gtcaccaact gttgaagcat gtgggatgtc cgataggctt
      241 aaacaaatta ctatcgggaa ttccactata acaacacaag atacactaaa ctctatactg
      301 gcatatgggg agtggcccaa atacttgagt gacctggacg cttcctcagt ggataagcct
      361 acccacccag agacatcatc tgatagattt
//