LOCUS       AB510199                3704 bp    DNA     linear   PLN 10-APR-2010
DEFINITION  Oryza sativa Japonica Group Sdr4 gene for putative zinc finger
            protein Sdr4, complete cds.
ACCESSION   AB510199
VERSION     AB510199.1
KEYWORDS    .
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
REFERENCE   1  (bases 1 to 3704)
  AUTHORS   Sugimoto,K., Takeuchi,Y. and Yano,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (22-JUN-2009) to the DDBJ/EMBL/GenBank databases.
            Contact:Kazuhiko Sugimoto
            National Institute of Agrobiological Science, QTL Genomics
            Research Center; 2-1-2 Kannondai, Tsukuba, Ibaraki 305-8602, Japan
            URL    :http://www.nias.affrc.go.jp/qtl/
REFERENCE   2
  AUTHORS   Sugimoto,K., Takeuchi,Y., Ebana,K., Miyao,A., Hirochika,H.,
            Hara,N., Ishiyama,K., Kobayashi,M., Ban,Y., Hattori,T. and Yano,M.
  TITLE     Molecular cloning of Sdr4, a regulator involved in seed dormancy
            and domestication of rice
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 107, 5792-5797 (2010)
COMMENT     
FEATURES             Location/Qualifiers
     source          1..3704
                     /chromosome="7"
                     /cultivar="Nipponbare"
                     /db_xref="taxon:39947"
                     /mol_type="genomic DNA"
                     /organism="Oryza sativa Japonica Group"
     CDS             2129..3160
                     /allele="Sdr4-n"
                     /codon_start=1
                     /experiment="QTL cloning"
                     /function="pre-harvest sprouting resistance"
                     /gene="Sdr4"
                     /product="putative zinc finger protein Sdr4"
                     /protein_id="BAI79301.1"
                     /standard_name="Seed Dormancy 4"
                     /transl_table=1
                     /translation="MAMVQPVDMAVKANEIMARFRPIAPKPVLPAAAAGVTGGGDGAA
                     AVAATNRVLCQLQSRPCRARKRGRPSVVPPVSPPAGAKRKRAPAYPVPVAPLRCAAVA
                     TATRARVSVVVVPAPESAGGVSALAPVSPSAGDSTRLSPTVVEVEDEDEERGVVLVER
                     DLLRKLLEPRKLLEPRAVRPVGSTIHVESVHIDVGRTTAAAAAAAPKTAEEVEAELES
                     DSLPAVVSDSSNRVRLVNDAYKRMVGQPECPWLDAVATAASRRISGEVALVVSEPAAA
                     AAALPETCKGFSCSAKIAWERDGKWSSVHAPCDVTRLQCESRDYVFAWRFRAAGDECN
                     THRRAAGDA"
BASE COUNT          772 a         1057 c         1147 g          728 t
ORIGIN      
        1 cacctattta caactccaag tctaactata accaaataag actggtatat tcgacaccta
       61 ttctaaaacg tgagttatta ttgcaacggc acatgtggtg gggcgcgtgg taaggacggc
      121 acggaggcgc gggtagcgcc cgacgcgggg cattttccaa aaaagatgtc taaggattac
      181 gcgagaccgt gagagtgcgt acgtgcaaaa tcagggcgga atttctctcc cgtgtctgcc
      241 acggccaccg gtgcattgca tatgcgcaca cgaggagcaa agctcgcgac ctcgcgcgtt
      301 gcactgccgc actgaacgat cgacggacga cggcagcgcg cggccgggcg tcgcgcgctg
      361 taccgcagcg cgcaccgcac caactgaact ctgcaaggtg caagcaacta gcgtacggcg
      421 tagcgtcgcg ctcgcgcggc cgcgcctcgc ctcgcgacgt acgcgcttgc gaattgaaag
      481 ccttcctttt cgtccgttcc ctgagaccct gacccgcgcc cacccactcg ccaagcggga
      541 gcgagacgga gcggcgcctg cacccgcgcg cccgccaatg gcagggcggc cactcgtcgc
      601 gcggcgttgc tacccgctcg ccacggcacg cagcacatgc cgtgcatgca aaagggtggg
      661 ttcttataaa aaaaaagaga gagtaagaaa cggagctgta gcgtcggtcc aaaagtttgt
      721 ttctcgagca gggagatcga agagagaagc atttgccctg ctgctgctcc ggctggccgg
      781 tttaaattcg tgctgctgca ttcggccggg tagctagccg gcccgtggtt gggctccagt
      841 aggacacgcg acatgcatgc tccacgtgtg acgctttgcc tgctgtttcg tgtaccgcag
      901 ctgcatgtat gcgtaaagtt tttctactac tagtttattt tttattgggc ggacaggtcg
      961 tcacagtaga gcatttaccg tcgagccgcg tactttttgg aacagaagag ttagatccac
     1021 agtgttttac atatccagtc gatttatgtt tgggtttggg aaatttcacc ggtgtaaaaa
     1081 gcttctcact tcatcgggca ccgtcttctg taaatttttt tcgatatgaa ctttgataaa
     1141 ttttgctcct cgtccaggcg aagaaactcc ggctttggct ataggaaacg gatggtgcat
     1201 gcatctagtc ccgacgagcg acgtaagcaa gcgttcgccc ggtcttgatg tgtgccacgt
     1261 gctggagacc gtcgtcacca gcttttaatt catcggaaag atagcaaagc gtttgtcgtc
     1321 gtggtttaca ttgcatcgtc tggtttccct ccgagatttt gtatgtacat gcatgtatag
     1381 tctcgtagac catacatgac cagcaaaacc acgtgcggat atatcaactt ttaggcggtt
     1441 ttgtgctggc tgaaacaata tgtacctcag ctgagaagta atctcgaaag catgagtaca
     1501 ccaccggagt cggagtgtac atgcatgcat gcacggcaag gtatgaccaa aaagcagttt
     1561 tgacgcagat tgatcattcg atctggtagt gaaaaacaaa aaaaaaaaaa ggtaaagtgg
     1621 tgtgtcccgg tgtccgccta tacgctaaac ttaccgtggt gctagagtac aagcgagccg
     1681 gttggtggag gcgagcgcaa aagcgccaca cggccttctg ccaatgaggc ctcacgccgt
     1741 cacgcggggc acgccagcca gccagtgacc gcggcggaac gcgccacggg ggacgatgcg
     1801 cccgaggggg gcggacgccg catgcagcgc aacgcgagta cgcgacctcg cctcacctca
     1861 cctccaccat acgcctcgcg ctgctggctg gaatccaccg gagcgcgcgg cccgcgactc
     1921 cgctccgcct acgtgtcggc cgcgtccccg cgcggtcgcc cacgtacccc gccccgccct
     1981 cccacgtgcc cctcccccct gcgcgcatcc gattggccgc ccacgccttc ttaaccccac
     2041 caccccacca ctcgggcccc aacgcatccg ttcaccacct gcgagagcga gcgtaccgtt
     2101 cgttcgttcg tccggtgtac gtctcgccat ggccatggtg cagccggtgg acatggccgt
     2161 gaaggccaac gagatcatgg cgaggttcag gcccatcgcg cccaagcccg tgctgccggc
     2221 ggcggcggcg ggggtgacgg gtggtggtga cggtgctgcg gcggtggcgg cgacgaaccg
     2281 cgtgctctgc cagctgcaga gcaggccgtg ccgggcgcgg aagcgggggc ggcccagcgt
     2341 agtgccgccg gtgtccccgc cggcgggggc caagaggaag agggcgccgg cgtacccggt
     2401 ccccgtggcg ccgctccggt gcgcggcggt ggccacggcg acgagggcgc gcgtgtcggt
     2461 ggtggtcgtc ccggccccgg agagtgcggg cggggttagt gcgctggcgc cggtgtcgcc
     2521 gagtgccggg gactcgacga ggctctcgcc gacggtggtg gaggtggagg acgaggacga
     2581 ggagaggggc gtggtgctcg tggagcgcga cctgctgcgg aagctgctgg agccgcggaa
     2641 gctgctggag ccgcgcgcgg tgcgccccgt gggctccacc atccacgtcg agtcagtcca
     2701 catcgacgtc ggccgcacca ccgccgccgc cgccgcagcc gccccgaaga cggcggagga
     2761 ggtggaggcg gagctggagt cggactccct cccggcggtg gtctcggact ccagcaaccg
     2821 cgtccggctg gtgaacgacg cgtacaagcg aatggtgggg cagcccgagt gcccgtggct
     2881 cgacgccgtg gccaccgccg cgtccaggag gatcagcggc gaggtggcgc tggtagtgtc
     2941 cgagccggcg gcggcggcgg cggcgctgcc ggagacatgc aaggggttct cgtgctcggc
     3001 caagatcgcg tgggagcgcg acggcaagtg gtcatccgtc catgcaccgt gcgacgtcac
     3061 ccggctgcag tgcgagtcga gggactacgt cttcgcctgg aggttccgcg ccgccggcga
     3121 cgaatgcaac acccaccgcc gcgccgccgg cgacgcgtga cgacgtgatg catcaagccg
     3181 gagcaaactt tagtagtgca tagatgtaat cgtgttaagg tgcaatgtta ctagtagtag
     3241 caaactagat cggctgcttc ctcttttgcg aagcttatag gatgcaaggc caggttctaa
     3301 agtatatatg atgttgaccg gagaatgcaa gggaaaattg taacttttgc tttagtgaga
     3361 tttgtttgtt ctcatgtagt ttagcactaa tgatccattt gacagcgaca agtgattgcg
     3421 tctgcatgca tggacatccc aggatagatg catgcatgga caacccaggt tagacaaatg
     3481 cgtggtcgca atcacattat ccgtgtcgcg ttatcaaaca aaataaagaa aaacgtcttc
     3541 actgtcgtgt tccaagagtt gagagcaaac cagggcagaa caacacttaa gttttgcttt
     3601 aacaacctaa gcaaacaggt aaaggatctt tatgaaatga tgtggaagga taatggtaaa
     3661 caattttagt acacaggaaa tcattctatt tgatcacagt gcac
//