LOCUS AB209080 4093 bp mRNA linear HUM 17-NOV-2007
DEFINITION Homo sapiens mRNA for brain glycogen phosphorylase variant protein.
ACCESSION AB209080
VERSION AB209080.1
KEYWORDS FLI_CDNA.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4093)
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Direct Submission
JOURNAL Submitted (22-MAR-2005) to the DDBJ/EMBL/GenBank databases.
Contact:Osamu Ohara
Kazusa DNA Research Institute, Department of Human Gene Research;
2-6-7 Kazusa-kamatari, Kisarazu, Chiba 292-0818, Japan
URL :http://protein.gsc.riken.go.jp/
REFERENCE 2
AUTHORS Totoki,Y., Toyoda,A., Takeda,T., Sakaki,Y., Tanaka,A.,
Yokoyama,S., Ohara,O., Nagase,T. and Kikuno,R.F.
TITLE Homo sapiens protein coding cDNA
JOURNAL Published Only in Database(2005)
COMMENT This work was supported in part by the National Project on Protein
Structural and Functional Analysis , Ministry of Education,
Culture , Sports, Science and Technology of Japan.
Totoki Y, Toyoda A, Takeda T, Sakaki Y, Tanaka A, Yokoyama S.
RIKEN Genomic Sciences Center, 1-7-22 Suehiro-cho, Tsurumi,
Yokohama 230-0045, Japan.
URL: http://protein.gsc.riken.go.jp/
FEATURES Location/Qualifiers
source 1..4093
/clone="hk04088"
/db_xref="H-InvDB:HIT000329015"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="this clone is also named as hsk003000685"
/note="vector:pBluescriptII SK plus"
/organism="Homo sapiens"
/tissue_type="brain"
CDS <1..2599
/codon_start=2
/inference="non-experimental evidence, no additional
details recorded"
/note="Start codon is not identified."
/product="brain glycogen phosphorylase variant"
/protein_id="BAD92317.1"
/translation="IPAFACAAAFLLHLFSSASAGAMAKPLTDSEKRKQISVRGLAGL
GDVAEVRKSFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQHYYERDP
KRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDLEELEEIEEDAGLGNGGLG
RLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWEKARPE
YMLPVHFYGRVEHTPDGVKWLDTQVVLAMPYDTPVPGYKNNTVNTMRLWSAKAPNDFK
LQDFNVGDYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVASTLQDIIRRF
KSSKFGCRDPVRTCFETFPDKVAIQLNDTHPALSIPELMRILVDVEKVDWDKAWEITK
KTCAYTNHTVLPEALERWPVSMFEKLLPRHLEIIYAINQRHLDHVAALFPGDVDRLRR
MSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVKQSVFKDFYELEPEKFQNKTNG
ITPRRWLLLCNPGLANTIVEKIGEEFLTDLSQLKKLLPLVSDEVFIRDVAKVKQENKL
KFSAFLEKEYKVKINPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKRDPAKAFVPR
TVMIGGKAAPGYHMAKLIIKLVTSIGDVVNHDPVVGDRLKVIFLENYRVSLAEKVIPA
ADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVED
VEALDRKGYNAREYYDHLPELKQAVDQISSGFFSPKEPDCFKDIVNMLMHHDRFKVFA
DYEAYMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDLQ
IPPPNIPRD"
BASE COUNT 845 a 1165 c 1222 g 861 t
ORIGIN
1 catcccggcg ttcgcgtgtg ccgccgcttt cctcctccat ctcttttcct ccgcctccgc
61 cggcgcgatg gcgaagccgc tgacggacag cgagaagcgg aagcagatca gcgtgcgcgg
121 cctggcgggg ctaggcgacg tggccgaggt gcggaagagc ttcaaccggc acttgcactt
181 cacgctggtc aaggaccgca atgtggccac gccccgcgac tacttcttcg cgctggcgca
241 cacggtgcgc gaccacctcg tgggccgctg gatccgcacg cagcagcact actacgagcg
301 cgaccccaag cgcatttatt atctttccct ggaattctac atgggtcgca cgctgcagaa
361 cacgatggtg aacctgggcc ttcagaatgc ctgcgatgaa gccatctatc agttggggtt
421 agacttggag gaactcgagg agatagaaga agatgctggc cttgggaatg gaggcctggg
481 gaggctggca gcgtgtttcc ttgactcaat ggctaccttg ggcctggcag catacggcta
541 tggaatccgc tatgaatttg ggatttttaa ccagaagatt gtcaatggct ggcaggtaga
601 ggaggccgat gactggctgc gctacggcaa cccctgggag aaagcgcggc ctgagtatat
661 gcttcccgtg cacttctacg gacgcgtgga gcacaccccc gacggcgtga agtggctgga
721 cacacaggtg gtgctggcca tgccctacga caccccagtg cccggctaca agaacaacac
781 cgtcaacacc atgcggctgt ggtccgccaa ggctcccaac gacttcaagc tgcaggactt
841 caacgtggga gactacatcg aggcggtcct ggaccggaac ttggctgaga acatctccag
901 ggtcctgtat ccaaatgata acttctttga ggggaaggag ctgcggctga agcaggagta
961 cttcgtggtg gcctccacgc tccaggacat catccgccgc ttcaagtcgt ccaagttcgg
1021 ctgccgggac cctgtgagaa cctgtttcga gacgttccca gacaaggtgg ccatccagct
1081 gaacgacacc caccccgccc tctccatccc tgagctcatg cggatcctgg tggacgtgga
1141 gaaggtggac tgggacaagg cctgggaaat cacgaagaag acctgtgcgt acaccaacca
1201 cactgtgctg cctgaggcct tggagcgctg gcccgtgtcc atgtttgaga agctgctgcc
1261 gcggcacctg gagataatct atgccatcaa ccagcggcac ctggaccacg tggccgcgct
1321 gtttcccggc gatgtggacc gcctgcgcag gatgtctgtg atcgaggagg gggactgcaa
1381 gcggatcaac atggcccacc tgtgtgtgat tgggtcccat gctgtcaatg gtgtggcgag
1441 gatccactcg gagatcgtga aacagtcggt ctttaaggat ttttatgaac tggagccaga
1501 gaagttccag aataagacca atggcatcac cccccgccgg tggctgctgc tgtgcaaccc
1561 ggggctggcc aataccatcg tggagaaaat tggggaggag ttcctgactg acctgagcca
1621 gctgaagaag ctgctgccgc tggtcagtga cgaggtgttc atcagggacg tggccaaggt
1681 caaacaggag aacaagctca agttctcggc cttcctggag aaggagtaca aggtgaagat
1741 caacccctcc tccatgttcg acgtgcatgt gaagaggatc cacgagtaca agcggcagct
1801 gctcaactgc ctgcacgtcg tcaccctgta caatcgaatc aagagagacc cggccaaggc
1861 ttttgtgccc aggactgtta tgattggggg caaggcagcg cccggttacc acatggccaa
1921 gctgatcatc aagttggtca cctccatcgg cgacgtcgtc aatcatgacc cagttgtggg
1981 tgacaggttg aaagtgatct tcctggagaa ctaccgtgtg tccttggctg agaaagtgat
2041 cccggccgct gatctgtcgc agcagatctc cactgcaggc accgaggcct caggcacagg
2101 caacatgaag ttcatgctca acggggccct caccatcggc accatggacg gcgccaacgt
2161 ggagatggcc gaggaggccg gggccgagaa cctcttcatc ttcggcctgc gggtggagga
2221 tgtcgaggcc ttggaccgga aagggtacaa tgccagggag tactacgacc acctgcccga
2281 gctgaagcag gccgtggacc agatcagcag tggctttttt tctcccaagg agccagactg
2341 cttcaaggac atcgtgaaca tgctgatgca ccatgacagg ttcaaggtgt ttgcagacta
2401 tgaagcctac atgcagtgcc aggcacaggt ggaccaactg taccggaacc ccaaggagtg
2461 gaccaagaag gtcatcagga acatcgcctg ctcgggcaag ttctccagtg accggaccat
2521 cacggagtat gcacgggaga tctggggtgt ggagccctcc gacctgcaga tcccgccccc
2581 caacatcccc cgggactagg cacaccctgc cttggcggga ccagcgggca tttgttttct
2641 tgctgacttt gcacctcctt ttttccccaa acactttgcc agccgctggt ggtccctgct
2701 tttctgagta ccatgtttcc aggaggggcc atgggggtca gggtggtttt gagagagcag
2761 ggtaaggaag gaatgtgcta gaagtgctcc tagtttcttg taaaggaagc cagagttgac
2821 agtacaaagg gtcgtggcca gccctgcagc ttcagcacct gccccaccca gagtgggagt
2881 caggtggagc cacctgctgg gctcccccag aactttgcac acatcttgct atgtattagc
2941 cgatgtcttt agtgttgagc ctctggattc tggggtctgg gccagtggcc atagtgaagc
3001 ctgggaatga gtgttactgc agcatctggg ctgccagcca cagggaaggg ccaagcccca
3061 tgtagcccca gtcatcctgc ccagccctgc ctcctggcca tgccgggagg ggtcggatcc
3121 tctaggcatc gccttcacag ccccctgccc cctgccctct gtcctggctc tgcacctggt
3181 atatgggtca tggacccaga tggggctttc cctttgtagc catccaatgg gcattgtgtg
3241 ggtgcttgga acccgggatg actgaggggg acactggagt gggtgcttgt gtctgctgtc
3301 tcagaggcct tggtcaggat gaagttggct gacacagctt agcttggttt tgcttattca
3361 aaagagaaaa taactacaca tggaaatgaa actagctgaa gccttttctt gttttagcaa
3421 ctgaaaattg tacttggtca cttttgtgct tgaggaggcc cattttctgc ctggcagggg
3481 gcaggtctgt gccctcccgc tgactcctgc tgtgtcctga ggtgcatttc ctgttgtaca
3541 cacaagggcc aggctccatt ctccctccct ttccaccagt gccacagcct cgtctggaaa
3601 aaggaccagg ggtcccggag gaacccattt gtgctctgct tggacagcag gcctggcact
3661 gggaggtggg ggtgagcccc tcacagcctt gcccctcccc agggctggca acctgccttc
3721 cattgcccaa gagagagggc agggaacagg ctactgtcct tccctgtgga attgccgaga
3781 aatctagcac cttgcatgct ggatctgggc tgcggggagg ctctttttct ccctggcctc
3841 cagtgcccac caggaggatc tgcgcacggt gcacagccca ccagagcact acagcctttt
3901 attgagtggg gtggggcaag tgctgggctg tggtcgtgcc ctgacagcat cttccccagg
3961 cagcggctct gtggaggagg ccatactccc ctagttggcc actggggcca ccaccctgac
4021 caccactgtg cccctcattg ttactacctt gtgagataaa aactgattaa acctttgtgg
4081 ctgtggttgg ctg
//