LOCUS AB088002 2564 bp DNA linear PLN 09-AUG-2003
DEFINITION Panax notoginseng chloroplast matK gene for maturase, located
within the intron of trnK, complete cds.
ACCESSION AB088002
VERSION AB088002.1
KEYWORDS .
SOURCE chloroplast Panax notoginseng
ORGANISM Panax notoginseng
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax.
REFERENCE 1 (bases 1 to 2564)
AUTHORS Komatsu,K., Zhu,S. and Fushimi,H.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Institute of Natural Medicine; 2630 Sugitani, Toyama, Toyama
930-0194, Japan
REFERENCE 2
AUTHORS Zhu,S., Fushimi,H., Cai,S. and Komatsu,K.
TITLE Phylogenetic relationship in genus Panax: inferred from
chloroplast trnK gene and nuclear 18S rRNA gene sequences
JOURNAL Planta Med. 69, 647-653 (2003)
COMMENT
FEATURES Location/Qualifiers
source 1..2564
/country="China: Yunnan, Guangxi"
/db_xref="taxon:44586"
/mol_type="genomic DNA"
/organelle="plastid:chloroplast"
/organism="Panax notoginseng"
/specimen_voucher="H. Fushimi, 96002; K. Komatsu et al.,
Y287-1, Y299-1"
tRNA 2..38
/gene="trnK"
/note="5' exon of transfer RNA for Lysine"
/product="tRNA-Lys"
intron 39..2554
/gene="trnK"
/note="intron of trnK gene"
CDS 761..2272
/codon_start=1
/gene="matK"
/inference="non-experimental evidence, no additional
details recorded"
/note="It is an open reading frame (ORF) located within
the intron of the transfer RNA gene for Lysine (trnK)"
/note="complete matK gene sequence"
/product="maturase"
/protein_id="BAC81676.1"
/transl_table=11
/translation="MEEFQRYLELDRSQQHYFLYPLIFQEYIYALAHDHGLNINRSIL
LENAGYDNKFSLLIVKRLIARMYQQNHFILSTNDSNQNRFLRRNKNLYSQMISEGFAV
IVEIPFYLQLKSSLESKGIVKSHNLRSIHSIFPFLEDKISHLIYGLEILIPYPVHLEI
LVQTLRYWVKDASSLHLLRFFLHEYCNWNTPNKAGSSFSKRNQRLFFLLYNSHLCEYE
SIFIFLRNQSSHLRSTSSGTLLERIYFYGKIKYLVKVFVKAFQVNLLLLKDPFMHYVR
YQGKSILASKGTPFLMKKWTYYFVNLWQCHFYLWSQPGRICINQLYNNSLDILGYLSS
ARLNPSMVRGQMLENSFLIDNAINKFDAIVPIIPLIGSLAKAKFCNVLGHPISKAVWT
DLSDSDIIDRFGRICRNLSHYHSGSSQKKSLYRIKYILRLSCARTLARKHKSTVRAFL
KRLGSGLLEEFFTAEEQVLYLTFPRASSASQRLYRRRIWYLDIICINDLANHE"
tRNA 2555..>2564
/gene="trnK"
/note="3' exon of transfer RNA for Lysine"
/product="tRNA-Lys"
BASE COUNT 821 a 418 c 457 g 868 t
ORIGIN
1 tgggttgcta actcaatggt agagtactcg gcttttaagt gcggctagga tcttttacac
61 atttggatga agcgaaggat tcgtccatac catcggtaaa gtttggaaga ccacgactga
121 tcctgaaagg gaatgaatgg aaaaaatagc atgtcgtatc aacgaagagt tctgagaata
181 tttcattctt tccggatcgg tccaaaccct tgtttgattt tttgaaacgg agcaaaaaaa
241 tgaattcaat ttcaagttgg gtcgaatgaa taaatggata gagatagagc cttgtggctt
301 caattaattg attataggga aaaagcaacg agcttctgtt cttaatttga atgattaccc
361 gatctaatta gacgttaaaa atatattagt gcctgatacg ggaagagctt ctcccatgga
421 gtggattctt tattttttaa tgaatcctaa ctattatcat tttctattat ggaatggaaa
481 tgcttgtgta gaagaaacag tatattgata aaaaattcca aaatcaaaag agcgattggg
541 ttgataaaat aaaggatttc taaccatctt gttatcctat aacgaacata aaccaattca
601 ttaaaatgga aaggagagga tagagaatcc gttgataagt ttaccactat ccgaggtatc
661 tattcgtttc ttactataat accttgtttt gactgtatcg cactatgtat catttgataa
721 ccttctaaac cctctacctt tagttcaact ataatttcaa atggaggaat tccaaagata
781 tttagagcta gatagatctc aacaacacta cttcttatat ccacttatct ttcaggagta
841 tatttatgca cttgctcatg atcatggttt aaatataaat agatccattt tgttggaaaa
901 tgcgggttat gacaataaat tcagtttact aattgtgaaa cgtttaattg ctcgaatgta
961 tcaacagaat cattttattc tttctactaa tgattctaac caaaatagat ttttgaggcg
1021 caacaagaat ttgtattctc aaatgatatc agaggggttt gcagtcattg tggaaattcc
1081 attttatcta caattaaaat cttccctaga aagcaaaggg atagtcaaat ctcataattt
1141 acgatcaatt cattcaatat ttcctttttt agaggacaaa atttcacatt taatttatgg
1201 tttagagata ctaataccct acccagtcca tctggaaatc ttggttcaaa ctcttcgcta
1261 ctgggtaaaa gatgcttctt ctttgcattt attacgattc tttctccacg agtattgtaa
1321 ttggaatact ccaaataaag ccggttcttc tttttcaaaa agaaaccaaa gactattctt
1381 cttactatat aattctcatc tatgtgaata cgaatccatc ttcatctttc tccgtaacca
1441 atcttctcat ttacgctcaa catcttctgg aacccttctt gaacgaatct atttctatgg
1501 aaaaataaaa tatcttgtaa aagtctttgt taaggctttt caagtcaatc tattgttgtt
1561 gaaggatcct ttcatgcatt atgttaggta tcaaggaaaa tccattctcg cttcaaaagg
1621 gacgcccttt ttgatgaaaa aatggacata ttactttgtt aatttatggc aatgtcattt
1681 ttacctgtgg tctcaaccgg gaaggatctg tataaaccaa ttatacaata attccctcga
1741 cattctgggc tatctatcaa gtgcgcggct aaacccttca atggtacgcg gtcaaatgct
1801 agaaaattca tttctaattg ataatgctat taataagttc gatgctattg ttccaattat
1861 tcctctgatt ggatcattgg ctaaagcgaa attttgtaac gtattggggc atcctattag
1921 taaggcggtt tggaccgatt tatcagattc tgatattatt gaccgatttg ggcgtatatg
1981 cagaaatctt tctcattatc atagtggatc ctcacaaaaa aagagtttgt atcgaataaa
2041 gtatatactt cgactttctt gtgctagaac tttggctcgt aaacacaaaa gtactgtacg
2101 tgcttttttg aaaagattgg gctcgggatt attggaagaa ttctttacgg cggaagaaca
2161 agttctttac ttgacctttc caagagcatc ttccgcttcg cagaggttat atagaaggcg
2221 gatttggtat ttggatatta tttgtatcaa tgatttggcc aatcatgaat gattcgttag
2281 gaatccgtgt aaattaaatg gaaattatca ctaaataatc taagtaatga agataaataa
2341 tgaagagata acgaaaaaaa tcctttttta tattctgaaa tgttgatgta ggatgtagta
2401 agggttaaat caaccgagta ttcaaccttt taaagttcta agtaaggaac tgggttttag
2461 atgtatatat agggaaagcc gtgtgcaatg aaaaatgcaa gcacggtttg gggaggggtt
2521 tttacctatt taacaaggaa attatctact ccatccgact agtt
//