LOCUS AB088000 2566 bp DNA linear PLN 09-AUG-2003
DEFINITION Panax japonicus chloroplast matK gene for maturase, located within
the intron of trnK, complete cds, country:Japan.
ACCESSION AB088000
VERSION AB088000.1
KEYWORDS .
SOURCE chloroplast Panax japonicus
ORGANISM Panax japonicus
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; campanulids; Apiales; Araliaceae; Panax.
REFERENCE 1 (bases 1 to 2566)
AUTHORS Komatsu,K., Zhu,S. and Fushimi,H.
TITLE Direct Submission
JOURNAL Submitted (09-JUL-2002) to the DDBJ/EMBL/GenBank databases.
Contact:Katsuko Komatsu
Institute of Natural Medicine; 2630 Sugitani, Toyama, Toyama
930-0194, Japan
REFERENCE 2
AUTHORS Zhu,S., Fushimi,H., Cai,S. and Komatsu,K.
TITLE Phylogenetic relationship in genus Panax: inferred from
chloroplast trnK gene and nuclear 18S rRNA gene sequences
JOURNAL Planta Med. 69, 647-653 (2003)
COMMENT
FEATURES Location/Qualifiers
source 1..2566
/country="Japan: Toyama, Tokushima, Hiroshima, Miyazaki"
/db_xref="taxon:44685"
/mol_type="genomic DNA"
/organelle="plastid:chloroplast"
/organism="Panax japonicus"
/specimen_voucher="K. Komatsu, 96001; S. Zhu, 20007,
20008, 20009, 20004"
tRNA 2..38
/gene="trnK"
/note="5' exon of transfer RNA for Lysine"
/product="tRNA-Lys"
intron 39..2556
/gene="trnK"
/note="intron of trnK gene"
CDS 762..2273
/codon_start=1
/gene="matK"
/inference="non-experimental evidence, no additional
details recorded"
/note="It is an open reading frame (ORF) located within
the intron of the transfer RNA gene for Lysine (trnK)"
/note="complete matK gene sequence"
/product="maturase"
/protein_id="BAC81674.1"
/transl_table=11
/translation="MEEFQRYLELDRSQQHYFLYPLIFQEYIYALAHDHGLNINRSIL
LENAGYDNKFSLLIVKRLIARMYQQNHLILSTNDSNQNRFLRRNKNLYSQMISEGFAV
IVEIPFYLQLKSSLESKGIVKSHNLRSIHSIFPFLEDKISHLIYGLEILIPYPVHLEI
LVQTLRYWVKDASSLHLLRFFLHEYCNWNTPNKAGSSFSKRNQRLFFLLYNSHLCEYE
SIFIFLRNQSSHLRSTSSGTLLERIYFYGKIKYLVKVFVKAFQVNLLLLKDPFMHYVR
YQGKSILASKGTPFLMKKWTYYFVNLWQCHFYLWSQPGRICINQLYNHSLDILGYLSS
ARLNPSMVRGQMLENSFLIDNAINKFDAIVPIIPLIGSLAKAKFCNVLGHPISKAVWT
DLSDSDIIDQFGRICRNLSHYHSGSSQKKSLYRIKYILRLSCARTLARKHKSTVRAFL
KRLGSGLLEEFFTAEEQVLYLTFPRASSASQRLYRRRIWYLDIICINDLANHE"
tRNA 2557..>2566
/gene="trnK"
/note="3' exon of transfer RNA for Lysine"
/product="tRNA-Lys"
BASE COUNT 822 a 418 c 457 g 869 t
ORIGIN
1 tgggttgcta actcaatggt agagtactcg gcttttaagt gcggctagga tcttttacac
61 atttggatga agcgaaggat tcgtccatac catcggtaaa gtttggaaga ccacgactga
121 tcctgaaagg gaatgaatgg aaaaaatagc atgtcgtatc aacgaagagt tctgagaata
181 tttcattctt tccggatcgg tccaaaccct tgtttgattt tttgaaacgg agcaaaaaaa
241 tgaattcaat ttcaagttgg gtcgaatgaa taaatggata gagatagagc cttgtggctt
301 caattaattg attataggga aaaaagcaac gagcttctgt tcttaatttg aatgattacc
361 cgatctaatt agacgttaaa aatatattag tgcctgatac gggaagagct tctcccatgg
421 agtggattct ttatttttta atgaatccta actattatca ttttctatta tggaatggaa
481 atgcttgtgt agaagaaaca gtatattgat aaaaaattcc aaaatcaaaa gagcgattgg
541 gttgataaaa taaaggattt ctaaccatct tgttatccta taacgaacat aaaccaattc
601 attaaaatgg aaaggagagg atagagaatc cgttgataag tttaccacta tccgaggtat
661 ctattcgttt cttactataa taccttgttt tgactgtatc gcactatgta tcatttgata
721 accctctaaa ccctctacct ttagttcaac tataatttca aatggaggaa ttccaaagat
781 atttagagct agatagatct caacaacact acttcttata tccacttatc tttcaggagt
841 atatttatgc acttgctcat gatcatggtt taaatataaa tagatccatt ttgttggaaa
901 atgcgggtta tgacaataaa ttcagtttac taattgtgaa acgtttaatt gctcgaatgt
961 atcaacagaa tcatttgatt ctttctacta atgattctaa ccaaaataga tttttgaggc
1021 gcaacaagaa tttgtattct caaatgatat cagaggggtt tgcagtcatt gtggaaattc
1081 cattttatct acaattaaaa tcttccctag aaagcaaagg gatagtcaaa tctcataatt
1141 tacgatcaat tcattcaata tttccttttt tagaggacaa aatttcacat ttaatttatg
1201 gtttagagat actaataccc tacccagtcc atctggaaat cttggttcaa actcttcgct
1261 actgggtaaa agatgcttct tctttgcatt tattacgatt ctttctccac gagtattgta
1321 attggaatac tccaaataaa gccggttctt ctttttcaaa aagaaatcaa agactattct
1381 tcttactata taattctcat ctatgtgaat acgaatccat cttcatcttt ctccgtaacc
1441 aatcttctca tttacgctca acatcttctg gaacccttct tgaacgaatc tatttctatg
1501 gaaaaataaa atatcttgta aaagtctttg ttaaggcttt tcaagtcaat ctattgttgt
1561 tgaaggatcc tttcatgcat tatgttaggt atcaaggaaa atcaattctc gcttcaaaag
1621 ggacgccctt tttgatgaaa aaatggacat attactttgt taatttatgg caatgtcatt
1681 tttacctgtg gtctcaaccg ggaaggatct gtataaacca attatacaat cattccctcg
1741 acattctggg ctatctatca agtgcgcggc taaacccttc aatggtacgc ggtcaaatgc
1801 tagaaaattc atttctaatt gataatgcta ttaataagtt cgatgctatt gttccaatta
1861 ttcctctgat tggatcattg gctaaagcga aattttgtaa cgtattgggg catcctatta
1921 gtaaggcggt ttggaccgat ttatcagatt ctgatattat tgaccaattt gggcgtatat
1981 gcagaaatct ttctcattat catagtggat cctcacaaaa aaagagtttg tatcgaataa
2041 agtatatact tcgactttct tgtgctagaa ctttggctcg taaacacaaa agtactgtac
2101 gtgctttttt gaaaagattg ggctcgggat tattggaaga attctttacg gcggaagaac
2161 aagttcttta cttgaccttt ccaagagcat cttccgcttc gcagaggtta tatagaaggc
2221 ggatttggta tttggatatt atttgtatca atgatttggc caatcatgaa tgattcgtta
2281 ggaatccgtg taaattaaat ggaaattatc actaaataat ctaagtaatg aagataaata
2341 atgaagagat aacgaaaaaa atcctttttt tttattctga aatgttgatg taggatgtag
2401 taagggttaa atcaaccgag tattcaacct tttaaagttc taagtaagga actgggtttt
2461 agatgtatat atagggaaag ccgtgtgcaa tgaaaaatgc aagcacggtt tggggagggg
2521 tttttaccta tttaacaagg aaattatcta ctccatccga ctagtt
//