LOCUS AB020337 2762 bp mRNA linear HUM 14-APR-2000
DEFINITION Homo sapiens beta1,3-GalT 5 mRNA for UDP-Gal:GlcNAc
beta1,3-galactosyltransferase 5, complete cds.
ACCESSION AB020337
VERSION AB020337.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2762)
AUTHORS Isshiki,S., Togayachi,A. and Narimatsu,H.
TITLE Direct Submission
JOURNAL Submitted (20-NOV-1998) to the DDBJ/EMBL/GenBank databases.
Contact:Hisashi Narimatsu
Soka University, Institute of Life Science; 1-236, Tangi-cho,
Hachioji, Tokyo 192-8577, Japan
REFERENCE 2
AUTHORS Isshiki,S., Togayachi,A., Kudo,T., Nishihara,S., Watanabe,M.,
Kubota,T., Kitajima,M., Shiraishi,N., Sasaki,K., Andoh,T. and
Narimatsu,H.
TITLE Cloning, expression, and characterization of a novel
UDP-galactose:beta-N-Acetylglucosamine
beta1,3-Galactosyltransferase (beta3Gal-T5) responsible for
synthesis of type 1 chain in colorectal and pancreatic epithelia
and tumour cells derived therefrom
JOURNAL J. Biol. Chem. 274, 12499-12507 (1999)
COMMENT
FEATURES Location/Qualifiers
source 1..2762
/cell_line="Colo 205"
/cell_type="Adenocarcinoma"
/chromosome="21"
/db_xref="H-InvDB:HIT000058629"
/db_xref="taxon:9606"
/map="21q22.3"
/mol_type="mRNA"
/organism="Homo sapiens"
exon 1..273
/number=1
exon 274..433
/number=3
exon 434..2762
/number=4
CDS 434..1366
/codon_start=1
/gene="beta1,3-GalT 5"
/product="UDP-Gal:GlcNAc beta1,3-galactosyltransferase 5"
/protein_id="BAA77664.1"
/transl_table=1
/translation="MAFPKMRLMYICLLVLGALCLYFSMYSLNPFKEQSFVYKKDGNF
LKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWGKERMVKGKQLKTFFLLGTTSS
AAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMF
INVDYLTELLLKKNRTTRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTG
YVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRLEELHSQPTFFPGGLRFSVC
LFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV"
polyA_site 2762
/note="45 a nucleotides"
BASE COUNT 651 a 703 c 679 g 729 t
ORIGIN
1 gggcccagat agaacaagaa ggcagaagaa atgtgaattc ctctttctct gctggagctg
61 ggatattctt cttctcctgc ccttggacat cagagctgca ggctctctgg cctttggacc
121 cgaggattta taccaagcag gtttctgggt tctcaggcct ttggccttgg actgatagtt
181 acaccattgg catatctggt tctgaggctc ttggtcttgg actgagccac actcctggca
241 tcccagcgtc tccagcttgc atggcctgtc acgtgattcc tgtcagaatc accatttttg
301 gtaaacaaac caagcccaga acctgataat tatggagcat tctacactga cagttctttg
361 agacaaattt cctcttggca tttacactgt ggctttagct ttcaaaccag aggttcctct
421 tacccagcaa aaaatggctt tcccgaagat gagattgatg tatatttgcc ttctggttct
481 gggggctctt tgtttgtatt ttagcatgta cagtctaaat cctttcaaag aacagtcctt
541 tgtttacaag aaagacggga acttccttaa gctcccagat acagactgca ggcagacacc
601 tcccttcctc gtcctgctgg tgacctcatc ccacaaacag ttggctgagc gcatggccat
661 ccggcagacg tgggggaaag agaggatggt gaagggaaag cagctgaaga cattcttcct
721 cctggggacc accagcagtg cagcggaaac gaaagaggtg gaccaggaga gccagcgaca
781 cggggacatt atccagaagg atttcctaga cgtctattac aatctgaccc tgaagaccat
841 gatgggcata gaatgggtcc atcgcttttg tcctcaggcg gcgtttgtga tgaaaacaga
901 ctcagacatg ttcatcaatg ttgactatct gactgaactg cttctgaaga aaaacagaac
961 aaccaggttt ttcactggct tcttgaaact caatgagttt cccatcaggc agccattcag
1021 caagtggttt gtcagtaaat ctgaatatcc gtgggacagg tacccaccat tctgctccgg
1081 caccggctac gtgttttctg gcgacgtggc gagtcaggtg tacaatgtct ccaagagcgt
1141 cccatacatt aaactggaag acgtgtttgt ggggctctgc ctcgaaaggc tgaacatcag
1201 attggaggag ctccactccc agccgacctt ttttccaggg ggcttacgct tctccgtatg
1261 cctcttcagg aggatcgtgg cctgccactt catcaagcct cggactctct tggactactg
1321 gcaggctcta gagaattccc ggggggaaga ttgtccgcct gtctgagggg agcccagagg
1381 cacatccgga caagtttcag ataacccgtg gggatagttt ttgctagatt ttggaagagg
1441 gggcgggaca gaggatgctg ttcttcagtg ctgaaatcca cgccagaatg tcggtgttca
1501 tgaagtcact gattagttcc cacttggtgc cccaggcaat aataggcccg tctcttgggc
1561 acgcacactc ttcatactaa gtgtttgaca tacacctgga tttttgcatt tcaggggtca
1621 gtatcctatg acatgatggg tgttaccatc ctaattttac aggcaaggac acagcagctg
1681 cgagaggtac agaaacttgt cccaaggctc acagccagta ggcataggag cgggaatgaa
1741 aatcgagcac tgtcagaatc tggtgggcag cccctgactt gaaccactcc cacgtgctgc
1801 ctcccttagg aggggacact gatgatgagg tctcggagcc ggcatccttc catccctgtc
1861 gagtcccctc cacctcagct cccagtcctt gtgctttttg gagctaagcc tgggatgacc
1921 aaattcaccc cagctccttc attcacaggg ctggatgtag ctgggattga gtccatgtta
1981 tcggctcggt actcaacaca acccaagttt catccgagga aatgtccccg cagtggatgc
2041 agctcacatg ctgaggaaca cccagctctg gacagagttc ttataaatgt ataaattagg
2101 ctcagaaacc actgcattct gacctgctgt acagactgcc cacactgctg acctgcctag
2161 cgagcaggac atcccttctg agccatctgc tgctctctca tttcatcacc ccaactgtcc
2221 cttgtttttg atcaatgggg accagccact gccccaggag cactttaggg ctctcagttc
2281 aaactgaagg acagttgaac tcagatgggg ttcatgtggg attctgggag ctttctggga
2341 attcagttgg agtcaagtca ggatgctctc aaggacccct cgggctcaga gccctaaagt
2401 gggccctggt gaagcagggt ggtcctgcgt ccacttccca agcctgagcc aagctcatct
2461 tcattgaatg tctcatttgg ccgaggaaca actgaacttt gtggtttgct gtttagcctt
2521 cagtttgctc cgctgcctcc tacccagagg tttgtgcgag cctgtgttgc agggttgtat
2581 aaaaccaagg tacttcgtta gttttgccca ttcagccatg gtcacgtgac atgcaaagta
2641 atcttgctcc taattataga aatgattttt cttttaattt tttactttac cagactttac
2701 tttgtactca gagaagaggc ctcacatggc tgtgtcacat ataaatgttg gactaaactc
2761 tt
//