LOCUS LC571517 1465 bp DNA linear BCT 24-AUG-2021
DEFINITION Nitrosopumilus zosterae NM25 gene for 16S ribosomal RNA, partial
sequence.
ACCESSION LC571517
VERSION LC571517.1
KEYWORDS .
SOURCE Nitrosopumilus zosterae
ORGANISM Nitrosopumilus zosterae
Archaea; Nitrososphaerota; Nitrososphaeria; Nitrosopumilales;
Nitrosopumilaceae; Nitrosopumilus.
REFERENCE 1 (bases 1 to 1465)
AUTHORS Mori,K. and Nakagawa,T.
TITLE Direct Submission
JOURNAL Submitted (22-JUL-2020) to the DDBJ/EMBL/GenBank databases.
Contact:Koji Mori
National Institute of Technology and Evaluation (NITE), NBRC;
2-5-8 Kazusakamatari, Kisarazu, Chiba 292-0818, Japan
REFERENCE 2
AUTHORS Nakagawa,T., Mori,K., Hosoyama,A., Yamazoe,A., Tsuchiya,Y.,
Ueda,S., Takahashi,R. and Stahl,D.A.
TITLE Nitrosopumilus zosterae sp. nov., an autotrophic ammonia-oxidizing
archaeon of phylum Thaumarchaeota isolated from coastal eelgrass
sediments of Japan
JOURNAL Int. J. Syst. Evol. Microbiol. 71, 004961 (2021)
REMARK Publication Status: Online-Only
DOI:10.1099/ijsem.0.004961
REFERENCE 3
AUTHORS Qin,W., Zheng,Y., Zhao,F., Wang,Y., Urakawa,H.,
Martens-Habbena,W., Liu,H., Huang,X., Zhang,X., Nakagawa,T.,
Mende,D.R., Bollmann,A., Wang,B., Zhang,Y., Amin,S.A.,
Nielsen,J.L., Mori,K., Takahashi,R., Armbrust,E.V.,
Winkler,M-K.H., DeLong,E.F., Li,M., Lee,P-H., Zhou,J., Zhang,C.,
Zhang,T., Stahl,D.A. and Ingalls,A.E.
TITLE Alternative strategies of nutrient acquisition and energy
conservation map to the biogeography of marine ammonia-oxidizing
archaea
JOURNAL ISME J 14, 2595-2609 (2020)
REMARK DOI:10.1038/s41396-020-0710-7
COMMENT
FEATURES Location/Qualifiers
source 1..1465
/collected_by="Tatsunori Nakagawa"
/country="Japan:Shizuoka, Shimoda, Tanoura Bay"
/db_xref="taxon:718286"
/isolation_source="nitrifying enrichment from coastal
sand of an eelgrass zone"
/mol_type="genomic DNA"
/organism="Nitrosopumilus zosterae"
/strain="NM25"
/type_material="type strain of Nitrosopumilus zosterae"
rRNA <1..>1465
/product="16S ribosomal RNA"
BASE COUNT 384 a 330 c 436 g 315 t
ORIGIN
1 ttgatcctgc cggacctgac tgctatcgga ttgatactaa gccatgcgag tcattgtagt
61 aatacaaggc agacggctca gtaacgcgta gtcaacctac cctatggacg agaataacct
121 cgggaaactg agaataatac tcgatagaac attatgcctg gaatggttta tgtttcaaat
181 gatttatcgc cgtaggatgg gactgcggcc tatcagtttg ttggtgaggt aatggcccac
241 caagactatt acaggtacgg gctctgagag gagtagcccg gagatgggta ctgagacacg
301 gacccaggcc ctatggggcg cagcaggcga gaaaactttg caatgtgcga aagcacgaca
361 aggttaatcc gagtggtttc tgctaaagga accttttgtc agtcctagaa acactgatga
421 ataaggggtg ggcaagttct ggtgtcagcc gccgcggtaa aaccagcacc tcaagtggtc
481 aggatgatta ttgggcctaa agcatccgta gccggctctg taagttttcg gttaaatctg
541 tacgctcaac gtacaggctg ccgggaatac tgcagagcta gggagtggga gaggtagacg
601 gtactcggta ggaaggggta aaatcctttg atctattgat gaccacctgt ggcgaaggcg
661 gtctaccaga acacgtccga cggtgaggga tgaaagctgg gggagcaaac cggattagat
721 acccgggtag tcccagctgt aaactatgca aactcagtga tgcattggct tgtggccaat
781 gcagtgctgc agggaagccg ttaagtttgc cgcctgggaa gtacgtacgc aagtatgaaa
841 cttaaaggaa ttggcggggg agcaccacaa ggggtgaagc ctgcggttca attggagtca
901 acgccagaaa tcttacccgg agagacagca gaatgaaggt caagctgaag actttaccag
961 acaagctgag aggtggtgca tggccgtcgc cagctcgtgc cgtgagatgt cctgttaagt
1021 caggtaacga gcgagatccc tgcctctagt tgccaccatt actctcagga gtagtggggc
1081 gaattagcgg gaccgccgca gttaatgcgg aggaaggaag gggccacggc aggtcagtat
1141 gccccgaaac tctggggcca cacgcgggct gcaatggtaa tgacaatggg ttccaaatcc
1201 gaaaggagga ggtaatcccc aaacattacc acagttatga ctgagggctg caactcgccc
1261 tcacgaatat ggaatcccta gtaactgcgt gtcattatcg cgcggtgaat acgtccctgc
1321 tccttgcaca caccgcccgt cgtttcattg aagtgagctt ttagcgaggt gacgtctgat
1381 tggcgttatc gaactcgagg ttcgtgacaa gggaaaagtc gtaacaaggt gaccgtaggg
1441 gaacctgcgg tcggatcacc tcctt
//