LOCUS LC531930 1462 bp DNA linear BCT 19-FEB-2021
DEFINITION Desulfovibrio subterraneus HN2 gene for 16S rRNA, partial sequence.
ACCESSION LC531930
VERSION LC531930.1
KEYWORDS .
SOURCE Desulfovibrio subterraneus
ORGANISM Desulfovibrio subterraneus
Bacteria; Thermodesulfobacteriota; Desulfovibrionia;
Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.
REFERENCE 1 (bases 1 to 1462)
AUTHORS Ueno,A. and Tamazawa,S.
TITLE Direct Submission
JOURNAL Submitted (09-MAR-2020) to the DDBJ/EMBL/GenBank databases.
Contact:Akio Ueno
Northern Advancement Centre for Science and Technology (NOASTEC),
Horonobe Research Institute for the Subsurface Environment
(H-RISE); Sakae-machi 5-3, Horonobe-cho, Hokkaido 098-3221, Japan
URL :http://www.h-rise.jp
REFERENCE 2
AUTHORS Ueno,A., Tamazawa,S., Tamamura,S., Murakami,T., Kiyama,T.,
Inomata,H., Amano,Y., Miyakawa,K., Tamaki,H., Naganuma,T. and
Kaneko,K.
TITLE Desulfovibrio subterraneus sp. nov., a mesophilic sulfate-reducing
deltaproteobacterium isolated from a deep siliceous mudstone
formation
JOURNAL Int. J. Syst. Evol. Microbiol. (2021) In press
REMARK Publication Status: Available-Online prior to print
DOI:10.1099/ijsem.0.004683
COMMENT
FEATURES Location/Qualifiers
source 1..1462
/collected_by="Satoru Shimizu"
/collection_date="2005-01-15"
/country="Japan"
/culture_collection="DSM:101010"
/db_xref="taxon:2718620"
/isolation_source="groundwater"
/mol_type="genomic DNA"
/organism="Desulfovibrio subterraneus"
/PCR_primers="fwd_name: 27f, fwd_seq:
agagtttgatcctggctcag, rev_name: 1492r, rev_seq:
ggttaccttgttacgactt"
/strain="HN2"
/type_material="type strain of Desulfovibrio subterraneus"
rRNA <1..>1462
/product="16S ribosomal RNA"
BASE COUNT 371 a 343 c 457 g 291 t
ORIGIN
1 attgaacgct ggcggcgtgc ctaacacatg caagtcgaac gagaaagttc cttcgggaat
61 gagtacagtg gcgcacgggt gagtaacgcg tggataatct acccattggt tcggaataac
121 agttggaaac gactgataat actggataat atggcaacgt taaaggtggc ctctgcttgc
181 aagctactgc caatggatga gtccgcgtct cattagctag acggtagggt aacggcctac
241 cgtggcaacg atgagtagca ggcctgagag ggtggcctgc cacactggga ctggaacacg
301 gcccagactc ctacgggagg cagcagtggg gaatattgcg caatggggga aaccctgacg
361 cagcgacgcc gcgtggagga tgaaggtttt cggatcgtaa actcctgtca gaagggaaga
421 aacctgcaaa aagtaatatg ttttgcagct gacggtacct tcagaggaag caccggctaa
481 ttccgtgcca gcagccgcgg taatacggaa ggtgcaagcg ttaatcggaa tcactgggcg
541 taaagcgctc gtaggtggct ttgtaagtca ggtgtgaaag cccacggctc aaccgtggaa
601 ttgcacttga tactgcattg cttgagttcg ggagagggta gtggaattcc aggtgtagga
661 gtgaaatccg tagagatctg gaggaacacc agtggcgaag gcgactacct ggaccgatac
721 tgacactgag gagcgaaagc gtggggagca aacaggatta gataccctgg tagtccacgc
781 tgtaaacgat ggatactagg tgtcgggggc ttgaccttcg gtgccgtagc taacgcgtta
841 agtatcccgc ctggggagta cggtcgcaag gctgaaactc aaagaaattg acgggggccc
901 gcacaagcgg tggagtatgt ggtttaattc gatgcaacgc gaagaacctt acctaggctt
961 gacatccctg gaaccttccc gaaaaggaag ggtgctcttc ggagaaccag gagacaggtg
1021 ctgcatggct gtcgtcagct cgtgccgtga ggtgttgggt taagtcccgc aacgagcgca
1081 acccctattc ttagttgcca tcaggtgatg ctgggcactc taggaagact gcccgggtta
1141 accgggagga aggtggggac gacgtcaagt catcatggcc cttacgccta gggctacaca
1201 cgtactacaa tggtgcatac aaagggcagc gataccgcga ggtggagcca atcccagaaa
1261 gtgcatctca gtccggatag gagtctgcaa ctcgactcct tgaagtcgga atcgctagta
1321 atcctggatc agcatgccag ggtgaatgcg ttcccgggcc ttgtacacac cgcccgtcac
1381 accacgaaag ttggttctac ccgacatcgg tgagctaacc cgcaagggag gcagccgcct
1441 acggtagggc taatgattgg gg
//