LOCUS LC156099 1566 bp mRNA linear PLN 08-APR-2017
DEFINITION Nicotiana benthamiana NbCDPKiso2 mRNA for calcium dependent
protein kinase isoform 2, complete cds.
ACCESSION LC156099
VERSION LC156099.1
KEYWORDS .
SOURCE Nicotiana benthamiana
ORGANISM Nicotiana benthamiana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
Nicotianoideae; Nicotianeae; Nicotiana.
REFERENCE 1 (bases 1 to 1566)
AUTHORS Hyodo,K. and Okuno,T.
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2016) to the DDBJ/EMBL/GenBank databases.
Contact:Kiwamu Hyodo
Institute of Plant Sciences and Resources, Okayama University,
Group of Plant-Microbe Interactions; Chuou 2-20-1, Kurashiki,
Okayama 710-0046, Japan
URL :http://www.rib.okayama-u.ac.jp/pmi/index-j.html
REFERENCE 2
AUTHORS Hyodo,K., Hashimoto,K., Kuchitsu,K., Suzuki,N. and Okuno,T.
TITLE Harnessing host ROS-generating machinery for the robust genome
replication of a plant RNA virus
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 114, E1282-E1290 (2017)
REMARK DOI:10.1073/pnas.1610212114
COMMENT
FEATURES Location/Qualifiers
source 1..1566
/db_xref="taxon:4100"
/dev_stage="7-leaf-stage"
/mol_type="mRNA"
/organism="Nicotiana benthamiana"
/tissue_type="fully expanded leaf"
CDS 1..1566
/codon_start=1
/gene="NbCDPKiso2"
/note="interacts with red clover necrotic mosaic virus
replication proteins"
/product="calcium dependent protein kinase isoform 2"
/protein_id="BAX24557.1"
/transl_table=1
/translation="MGNICSSKSKPEQSNSNGHHGSGGVGPHRTEIHYTKSPGPESQL
PVRAPPSPKPVSAHGTILGKPYEDVRVHYTLGKELGRGQFGVTYLCTEISTGQQYACK
SISKKKLVTKADKDDMRREIQIMQHLSGQPNIVEFKGAYEDKGSVYLVMELCGGGELF
DRIIAKGHYSERAAATMCRAIVNVVHVCNFMGVLHRDLKPENFLLSDKSENAALKITD
FGLSVFIQEGKLYKDIVGSAYYVAPEVLRRSYGKEIDVWSAGVMLYILLSGVPPFWAE
TEKGIFDAILKGHIDFESEPWPSVSSSAKDLVRKMLTKDPKKRITAAQVLEHPWLKEG
GDASDKPLEGAVLSRMKQFRAMNKLKKLALKVIAENLSAEEIHGLKAMFHNIDTDNSG
TITYEELRSGLAKLGSKLTEAEVKQLMEAADVDGNGSIDYTEFITATMHKHRLERDEN
LYTAFQYFDKDGSGFITRDELETAMEEHGIGDPACIREIISEVDTDNDGRINYNEFCA
MMRSGVKQPGKLF"
BASE COUNT 497 a 275 c 384 g 410 t
ORIGIN
1 atgggaaata tctgttcaag caaaagtaaa cctgaacagt caaattccaa cggccaccat
61 ggatcaggag gagttggacc ccatcgaact gaaattcact acacaaaatc tccaggccct
121 gaatctcagt tgcctgtaag ggccccacca agcccaaaac cagtttctgc acacggtaca
181 attcttggta agccctatga agatgttaga gtgcactata cacttggtaa agaattgggt
241 aggggtcaat ttggtgttac atatttgtgt actgaaattt caactggtca acaatatgct
301 tgtaaatcaa tatcaaaaaa gaaacttgtt actaaggctg ataaggatga tatgaggaga
361 gaaattcaaa ttatgcaaca tttgagtgga cagcctaata ttgttgaatt taaaggtgct
421 tatgaggata agggatcggt ttatcttgtg atggaattat gtggaggtgg agagctgttt
481 gataggatta ttgcaaaggg gcattatagt gaaagagctg ctgcaacaat gtgtagggct
541 attgtcaatg ttgtgcacgt ttgtaatttt atgggcgtgt tgcatcgtga tctcaagcct
601 gaaaactttt tgctttctga taagagtgaa aatgctgctc taaagattac tgattttggg
661 ctctcagtat tcattcaaga aggtaagttg tacaaggata tagttgggag tgcttactat
721 gttgcccctg aggtcttacg gaggagttac ggcaaggaaa tagacgtttg gagtgcaggt
781 gttatgcttt atatactgct cagtggtgtg cccccctttt gggcagaaac cgaaaagggt
841 atatttgatg ctatacttaa aggtcacatt gacttcgaaa gtgaaccttg gccctctgta
901 tcaagtagtg ccaaggacct agtacggaag atgctgacta aagacccaaa gaaacggatt
961 acagctgcac aggttcttga gcatccttgg ctgaaggaag gtggtgatgc atcagacaaa
1021 ccattagagg gtgctgtcct ttcaagaatg aagcaattca gagctatgaa caagctcaag
1081 aaactcgctt tgaaggtcat tgcagagaat ctctctgcag aagaaattca cggactcaaa
1141 gcaatgttcc acaatattga cactgataat agtggcacta tcacttatga agaactgagg
1201 agcggattgg ctaaacttgg gtcaaagctc acagaggctg aagtcaagca gttgatggaa
1261 gctgccgatg tggatggaaa tggctcaatt gactacactg aattcatcac cgccaccatg
1321 cataagcaca ggctagaaag agacgaaaat ctatatactg catttcagta ttttgataaa
1381 gatggcagtg ggttcatcac aagagatgaa ctcgaaacag ctatggaaga gcatggaata
1441 ggcgatccag cctgtataag ggaaataata tctgaagtgg acacggacaa tgatggaaga
1501 atcaactata acgaattctg tgcaatgatg agaagtggag tcaaacagcc aggcaaactc
1561 ttctag
//