LOCUS LC156098 2817 bp mRNA linear PLN 08-APR-2017
DEFINITION Nicotiana benthamiana NbRBOHB mRNA for respiratory burst oxidase
homolog protein B, complete cds.
ACCESSION LC156098
VERSION LC156098.1
KEYWORDS .
SOURCE Nicotiana benthamiana
ORGANISM Nicotiana benthamiana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; asterids; lamiids; Solanales; Solanaceae;
Nicotianoideae; Nicotianeae; Nicotiana.
REFERENCE 1 (bases 1 to 2817)
AUTHORS Hyodo,K. and Okuno,T.
TITLE Direct Submission
JOURNAL Submitted (02-JUN-2016) to the DDBJ/EMBL/GenBank databases.
Contact:Kiwamu Hyodo
Institute of Plant Sciences and Resources, Okayama University,
Group of Plant-Microbe Interactions; Chuou 2-20-1, Kurashiki,
Okayama 710-0046, Japan
URL :http://www.rib.okayama-u.ac.jp/pmi/index-j.html
REFERENCE 2
AUTHORS Hyodo,K., Hashimoto,K., Kuchitsu,K., Suzuki,N. and Okuno,T.
TITLE Harnessing host ROS-generating machinery for the robust genome
replication of a plant RNA virus
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 114, E1282-E1290 (2017)
REMARK DOI:10.1073/pnas.1610212114
COMMENT
FEATURES Location/Qualifiers
source 1..2817
/db_xref="taxon:4100"
/dev_stage="7-leaf-stage"
/mol_type="mRNA"
/organism="Nicotiana benthamiana"
/tissue_type="fully expanded leaf"
CDS 1..2817
/codon_start=1
/gene="NbRBOHB"
/note="interacts with red clover necrotic mosaic virus
replication proteins"
/product="respiratory burst oxidase homolog protein B"
/protein_id="BAX24556.1"
/transl_table=1
/translation="MQNSENHHPHHHHHHSDTEIIGNDRASYSGPLSGPLNKRGGKKS
ARFNIPESTDIGTSVGTGAKSNDDAYVEITLDVREDSVAVHSVKTAGGDDVEDPELAL
LAKGLEKKSTLGSSLVRNASSRIRQVSQELRRLASLNKRPIPTGRFDRNKSAAAHALK
GLKFISKTDGGGAGWAAVENRFDEITASTTGLLPRVKFGECIGMNKESKEFAVELYDA
LARRRNITTDSINKAQLKEFWDQVADQSFDSRLQTFFDMVDKDADGRITEEEVREIIG
LSASANRLSTIQKQADEYAAMIMEELDPNNLGYIMIENLEMLLLQAPNQSVQRGGESR
NLSQMLSQKLKHTQERNPIVRWYKSFMYFLQDNWQRVWVLLLWIGIMAGLFTWKYIQY
KEKAAYKVMGPCVCFAKGAAETLKLNMAIILLPVCRNTITWLRNKTRLGAAVPFDDNL
NFHKVIAVAIALGVGVHGLSHLTCDFPRLLNASEEEYEPMKYYFGDQPESYWWFIKGV
EGVTGIIMVVLMAIAFTLATPWFRRNRVSLPKPFHKLTGFNAFWYSHHLFVIVYTLFI
VHGEKLYITKDWYKRTTWMYLTIPIILYASERLIRAFRSSIKAVKILKVAVYPGNVLA
LHMSKPQGYKYKSGQYMFVNCAAVSPFEWHPFSITSAPGDDYLSVHIRTLGDWTRQLK
TVFSEVCQPPPNGKSGLLRADYLQGENNPNFPRVLIDGPYGAPAQDYKKYEVVLLVGL
GIGATPMISIVKDIVNNMKAMDEEENSLEDGHNNMAPNSSPNIAQKKGNKSGSASGRN
NFNTRRAYFYWVTREQGSFDWFKGIMNEAAEMDHKGVIEMHNYCTSVYEEGDARSALI
TMLQSLHHAKNGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEAKVGVFYCGAPALTK
ELRQHALDFSHKTSTKFDFHKENF"
BASE COUNT 881 a 535 c 634 g 767 t
ORIGIN
1 atgcaaaatt ctgaaaatca tcatccgcac caccatcacc accattcgga cacagagata
61 attggaaatg acagagcgtc gtacagtggt ccgttaagcg gaccgttgaa taaacgaggc
121 ggcaaaaaga gtgcgagatt taacattcct gaatctaccg acatcggaac cagtgtcgga
181 accggcgcca agtccaatga tgatgcctac gttgaaatta ctctcgatgt tcgcgaagat
241 tccgtcgctg tccacagtgt caaaactgcc ggcggtgatg acgtggaaga tcccgagctg
301 gctttattag ctaaaggttt agagaagaag tccactttag gatcttcact tgttcgaaat
361 gcttcgtcta gaattcggca agtgtcacaa gagctcaggc gtttggcttc tttaaataaa
421 cgtccaattc ctactggaag gttcgacagg aataaatcag ctgctgctca tgctcttaaa
481 ggtctcaagt ttattagtaa gaccgacggc ggcggcgctg gttgggccgc cgtcgagaat
541 cggttcgatg agattaccgc ttccactact ggcttgcttc ctcgtgtcaa atttggagaa
601 tgcataggta tgaataagga gtctaaggaa tttgctgtag agctatatga tgcgctagct
661 cggaggagaa acataacaac tgattccatt aacaaagcac agctcaaaga gttctgggat
721 caagtggctg accaaagttt tgattctcgc cttcaaactt tctttgacat ggttgataaa
781 gatgctgatg gtagaatcac agaagaagaa gtcagagaga ttataggcct tagcgcgtcg
841 gccaacaggc tgtcaacaat ccagaaacaa gctgatgaat acgcagcaat gatcatggaa
901 gagttggatc ctaacaacct cggatacatt atgattgaga acttggaaat gctattattg
961 caagcaccaa atcaatcagt gcaaagagga ggcgaaagtc ggaacttgag tcaaatgcta
1021 agtcaaaaac taaagcatac acaagagaga aatccaatag taagatggta caagagtttc
1081 atgtactttt tgcaggataa ttggcaaaga gtttgggtat tgttactttg gattggaatt
1141 atggctggac tatttacatg gaaatatata cagtataaag aaaaagctgc atataaagtc
1201 atgggtccct gtgtatgttt tgccaaaggt gctgctgaaa cactcaagct caacatggca
1261 attattttac ttccggtttg cagaaacaca atcacatggc ttcgtaataa aaccagatta
1321 ggtgctgctg ttccctttga tgataacctt aattttcaca aagtgatagc agtggcaatt
1381 gcacttggcg ttggagttca cggactatct catttgacat gtgattttcc tcggctttta
1441 aatgctagtg aagaagaata tgaaccaatg aagtactatt ttggagatca gccagaaagc
1501 tattggtggt ttataaaagg agtagaaggg gtaactggaa ttataatggt ggttctaatg
1561 gcaatagcat ttacattagc aactccatgg tttagaagga acagagtcag tttgccaaaa
1621 ccatttcaca aactcactgg atttaatgcg ttttggtact ctcaccatct ctttgttatt
1681 gtctacactc tgttcattgt ccatggtgaa aagctataca ttaccaaaga ttggtacaag
1741 agaacgacat ggatgtactt aactatccca atcatactct atgctagtga aaggttgatt
1801 agggcattca ggtcaagcat caaagctgtt aagattttga aggtggcagt atatccagga
1861 aatgtcttgg cacttcacat gtcaaagcca cagggctaca aatataaaag tgggcaatac
1921 atgtttgtca actgtgctgc agtttctcca tttgagtggc atccattttc cattacttcg
1981 gccccaggag atgactatct cagtgtccat attagaactc ttggtgattg gaccaggcaa
2041 cttaaaactg ttttctccga ggtttgccag ccaccaccta atggaaaaag tggactcctc
2101 agagctgact acttgcaagg agagaataat cctaatttcc caagggtgtt aatagatgga
2161 ccatatggag caccagcaca agactacaag aaatatgagg tggttttgtt ggtaggtctt
2221 ggaattggag ccacaccaat gatcagtatt gttaaagaca ttgtcaacaa catgaaggca
2281 atggacgaag aagaaaattc tttggaagat ggacacaata atatggcacc aaattctagc
2341 cccaatattg cacaaaagaa gggtaataaa tcaggttcag caagtggaag aaataacttt
2401 aatacaagga gagcatattt ctattgggtt actagagaac aaggttcatt tgattggttc
2461 aaaggtataa tgaatgaagc tgcggaaatg gaccataagg gagttattga aatgcataat
2521 tattgtacta gtgtatatga agaaggtgat gctcgttctg ctcttattac tatgcttcag
2581 tctcttcacc atgccaaaaa tggtgttgac attgtttctg gcacgagagt taagtcacat
2641 tttgctaaac ctaattggcg taatgtctac aaacgcattg ctctcaacca ccctgaggct
2701 aaagttgggg tgttctattg tggggcacca gcactgacca aagaactaag acaacacgcc
2761 ttggattttt cacacaagac ctccaccaag tttgatttcc ataaagaaaa tttttag
//