LOCUS HQ599858 1701 bp cRNA linear VRL 23-NOV-2010
DEFINITION Influenza A virus (A/duck/Guangxi/038/2009(H6N6)) segment 4
hemagglutinin (HA) gene, complete cds.
ACCESSION HQ599858
VERSION HQ599858.1
KEYWORDS .
SOURCE Influenza A virus (A/duck/Guangxi/038/2009(H6N6))
ORGANISM Influenza A virus (A/duck/Guangxi/038/2009(H6N6))
Viruses; Riboviria; Orthornavirae; Negarnaviricota;
Polyploviricotina; Insthoviricetes; Articulavirales;
Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus
influenzae.
REFERENCE 1 (bases 1 to 1701)
AUTHORS Mo,S.L., Zheng,M., Hu,J., Chen,Y.X., Qu,S.J., Liang,Y. and Su,Y.Q.
TITLE Cloning and sequencing of HA and NA genes of duck-originated
Influenza A virus subtype H6N6 from Guangxi
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 1701)
AUTHORS Mo,S.L., Zheng,M., Hu,J., Chen,Y.X., Qu,S.J., Liang,Y. and Su,Y.Q.
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2010) Guangxi Center for Animal Disease
Prevention and Control, 51 Youai North Road, Nanning, Guangxi
530001, China
FEATURES Location/Qualifiers
source 1..1701
/organism="Influenza A virus
(A/duck/Guangxi/038/2009(H6N6))"
/mol_type="viral cRNA"
/strain="A/duck/Guangxi/038/2009"
/serotype="H6N6"
/host="duck"
/db_xref="taxon:926544"
/segment="4"
/country="China"
/collection_date="Feb-2009"
gene 1..1701
/gene="HA"
CDS 1..1701
/gene="HA"
/codon_start=1
/product="hemagglutinin"
/protein_id="ADQ53447.1"
/translation="MIAFIVIAILVATGKSDKICIGYHANNSTTKVDTILEKNVTVTH
SVELLENQKEERFCKISDKAPLDLRDCSLEGWILGNPRCGILLADQSWSYIVERPNAR
NGICYPGTLNEVEELKALIGSGERVERFEMFPKSTWTGVDTNSGVSSACPLGNGPSFY
RNLLWIIKSKSSEYPVIKGTFNNTGDKSVLYFWGVHHPPSTTEQNVLYGSGDRYVRMG
TESMNFAKSPEIAARPAVNGQRGRIDYFWSILKPGETLNVESNGNLIAPWYAYRFVNR
DSKGAIFRSNLPIENCDATCQTTEGVIRTNKTFQNVSPLWIGECPKYVKSKSLRLATG
LRNVPQIETRGLFGAIAGFIEGGWTGMIDGWYGYHHENSQGSGYAADRESTQRAIDGI
TNKVNSIIDKMNTQFEAVGHEFSNLERRIDNLNKRMEDGFLDVWTYNAELLVLLENEE
TLNLHDANVKNLHEKVKSQLRDNANDLGNGCFEFWRKCDNECMESVKNGTYDYPKYQE
ESRLNRQKIESVKLENFDVYQILAIYSTVSSSLVLVGLIMAMGLWMCSNGSMQCRICI
"
BASE COUNT 576 a 289 c 405 g 431 t
ORIGIN
1 atgattgcat tcattgtaat agcaatactg gtagcaaccg ggaaatcaga caagatatgc
61 attggatatc atgccaacaa ttcaacaaca aaggtagata cgatacttga gaagaacgta
121 actgtcacac actcagttga actgctggag aaccagaaag aagaaagatt ctgcaaaatc
181 tcagacaagg cccctctcga tctaagggat tgtagcctag aaggttggat cttggggaat
241 ccccgatgcg gcatattgct tgctgaccaa agctggtcat acatagtgga acggcctaat
301 gcccgaaatg ggatttgcta tcctggaaca ttaaatgaag tagaggaact gaaggcactt
361 attggatcag gggaaagggt agaaaggttt gagatgtttc ccaaaagtac atggacagga
421 gtggacacca acagtggagt atcaagtgct tgtcctcttg gtaatggtcc atctttctac
481 aggaaccttc tatggataat aaaatccaag tcatcagaat atccagtaat taaaggaact
541 ttcaacaaca ctggagacaa gtcagttctc tatttttggg gtgtacacca tcctcctagt
601 acaactgaac aaaatgttct gtatggttct ggtgatcgat atgttagaat gggaactgaa
661 agcatgaatt ttgccaaaag cccagagatt gcggcaaggc ctgctgtgaa tggtcagaga
721 ggcagaattg attatttctg gtccatttta aaaccagggg aaaccttgaa tgtggaatct
781 aacggaaatt taatagcccc ttggtatgca tacagatttg tcaacagaga tagtaaagga
841 gccatattca gatctaattt accaatcgag aactgtgatg ccacatgcca gactactgaa
901 ggagtgataa gaaccaacaa aacatttcag aatgtgagcc ctctgtggat tggagaatgc
961 cccaagtatg taaagagtaa gagtctaagg cttgcaactg gactaaggaa tgttccacaa
1021 atagaaacta gaggactttt tggagctatt gcaggcttca ttgaaggagg atggactgga
1081 atgattgatg ggtggtatgg ttaccaccat gaaaattctc aaggctcagg atacgcagct
1141 gatagagaaa gcactcaaag ggctatagac ggaattacaa acaaggtcaa ttccatcatt
1201 gataaaatga acacacaatt tgaggctgta ggtcatgagt tttcaaacct ggaaagaagg
1261 attgacaacc taaataaaag aatggaagat ggatttctgg atgtttggac atacaacgct
1321 gaactgttgg ttcttcttga aaacgaagaa acactaaatc tacatgatgc aaatgtgaag
1381 aacctacatg aaaaggtcaa atcacaacta agggacaatg ctaatgacct agggaacgga
1441 tgctttgaat tttggcgcaa gtgtgacaat gagtgtatgg agtctgtcaa aaatggtacc
1501 tatgactatc ccaagtatca agaagagagt agattaaaca gacagaaaat agaatcggta
1561 aaattggaga attttgatgt gtatcaaatc cttgccattt atagtacggt atcgagcagt
1621 ctagttttgg tagggctgat catggcaatg ggtctttgga tgtgctcaaa tggttcaatg
1681 cagtgcagga tatgtatata a
//