LOCUS HQ176004 3926 bp DNA linear MAM 18-NOV-2010
DEFINITION Balaenoptera acutorostrata prestin (SLC26A5) gene, complete cds.
ACCESSION HQ176004
VERSION HQ176004.1
KEYWORDS .
SOURCE Balaenoptera acutorostrata (minke whale)
ORGANISM Balaenoptera acutorostrata
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
Cetacea; Mysticeti; Balaenopteridae; Balaenoptera.
REFERENCE 1 (bases 1 to 3926)
AUTHORS Liu,Y., Rossiter,S.J., Han,X., Cotton,J.A. and Zhang,S.
TITLE Cetaceans on a molecular fast track to ultrasonic hearing
JOURNAL Curr. Biol. 20 (20), 1834-1839 (2010)
PUBMED 20933423
REFERENCE 2 (bases 1 to 3926)
AUTHORS Liu,Y., Rossiter,S.J., Han,X., Cotton,J.A. and Zhang,S.
TITLE Direct Submission
JOURNAL Submitted (24-AUG-2010) School of Life Sciences, East China Normal
University, North Zhongshan Road 3663, Shanghai 200062, China
FEATURES Location/Qualifiers
source 1..3926
/organism="Balaenoptera acutorostrata"
/mol_type="genomic DNA"
/db_xref="taxon:9767"
gene <1..>3926
/gene="SLC26A5"
mRNA join(<1..152,253..392,493..603,704..870,971..1135,
1236..1388,1489..1571,1672..1819,1920..2033,2134..2211,
2312..2407,2508..2614,2715..2784,2885..2977,3078..3185,
3286..3486,3587..3641,3742..>3926)
/gene="SLC26A5"
/product="prestin"
CDS join(1..152,253..392,493..603,704..870,971..1135,
1236..1388,1489..1571,1672..1819,1920..2033,2134..2211,
2312..2407,2508..2614,2715..2784,2885..2977,3078..3185,
3286..3486,3587..3641,3742..3926)
/gene="SLC26A5"
/note="solute carrier family 26, member 5"
/codon_start=1
/product="prestin"
/protein_id="ADO14479.1"
/translation="MDHAEENEILEAAQRYYVERPIFSHLVLQERLHKKDKISDSIGD
KLKQAFTCTPKKIRNIIYMFLPITKWLPAYRFKEYVLGDLVSGISTGVLQLPQGLAFA
MLAAVPPVFGLYSSFYPVIMYCFFGTSRHISIGPFAVISLMIGGVAVRLVPDDMVIPG
GVNATNGTEARDALRVKVAMSVTLLSGIIQFCLGVCRFGFVAIYLTEPLVRGFTTAAA
VHVFTSMLKYLFGVKTKRYSGIFSVVYSTVAVLQNVKNLNVCSLGVGLMVFGLLLGGK
EFNERFKEKLPAPIPLEFFAVVMGTGISAGFNLNESYNVDVVGTLPLGLLPPANPDTS
LFHLVYVDAIAIAIVGFSVTISMAKTLANKHGYQVDGNQELIALGLCNSIGSLFQTFS
ISCSLSRSLVQEGTGGKTQLAGCLASLMILLVILATGFLFESLPQAVLSAIVIVNLKG
MFMQFSDLPFFWRTSKIELTIWLTTFVSSLFLGLDYGLITAVIIALLTVIYRTQSPSY
KVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYSSALKRKTGVNPAL
IMGARRKAMKKYAKEVGNANMANATIVKVDAEVDGEDGTKPEEEENEIKYPPVVIKST
LPEELQRFMPPGDNVHTIILDFTQVNFIDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQ
VVNDLSRNQFFENPALLELLFHSIHDAVLGSQVREALAEQEATAAPPQEDSEPNATPE
A"
exon <1..152
/gene="SLC26A5"
/number=3
gap 153..252
/estimated_length=unknown
exon 253..392
/gene="SLC26A5"
/number=4
gap 393..492
/estimated_length=unknown
exon 493..603
/gene="SLC26A5"
/number=5
gap 604..703
/estimated_length=unknown
exon 704..870
/gene="SLC26A5"
/number=6
gap 871..970
/estimated_length=unknown
exon 971..1135
/gene="SLC26A5"
/number=7
gap 1136..1235
/estimated_length=unknown
exon 1236..1388
/gene="SLC26A5"
/number=8
gap 1389..1488
/estimated_length=unknown
exon 1489..1571
/gene="SLC26A5"
/number=9
gap 1572..1671
/estimated_length=unknown
exon 1672..1819
/gene="SLC26A5"
/number=10
gap 1820..1919
/estimated_length=unknown
exon 1920..2033
/gene="SLC26A5"
/number=11
gap 2034..2133
/estimated_length=unknown
exon 2134..2211
/gene="SLC26A5"
/number=12
gap 2212..2311
/estimated_length=unknown
exon 2312..2407
/gene="SLC26A5"
/number=13
gap 2408..2507
/estimated_length=unknown
exon 2508..2614
/gene="SLC26A5"
/number=14
gap 2615..2714
/estimated_length=unknown
exon 2715..2784
/gene="SLC26A5"
/number=15
gap 2785..2884
/estimated_length=unknown
exon 2885..2977
/gene="SLC26A5"
/number=16
gap 2978..3077
/estimated_length=unknown
exon 3078..3185
/gene="SLC26A5"
/number=17
gap 3186..3285
/estimated_length=unknown
exon 3286..3486
/gene="SLC26A5"
/number=18
gap 3487..3586
/estimated_length=unknown
exon 3587..3641
/gene="SLC26A5"
/number=19
gap 3642..3741
/estimated_length=unknown
exon 3742..>3926
/gene="SLC26A5"
/number=20
BASE COUNT 583 a 491 c 546 g 606 t
ORIGIN
1 atggatcatg ctgaagaaaa tgaaatcctt gaagcagccc agcggtacta tgtggaaaga
61 cctatcttta gtcatctggt cctccaagaa agactgcaca agaaggacaa gatttcggat
121 tccatcggcg ataagctgaa acaggcattc acnnnnnnnn nnnnnnnnnn nnnnnnnnnn
181 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
241 nnnnnnnnnn nnatgtactc ctaagaaaat acgaaatatc atttacatgt tcctccccat
301 aaccaagtgg ttgcctgcat acagattcaa ggagtatgtg ttgggtgact tagtctcagg
361 cataagcaca ggagtgctgc agcttcctca agnnnnnnnn nnnnnnnnnn nnnnnnnnnn
421 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
481 nnnnnnnnnn nngtttagcc tttgcaatgt tggcagctgt gcctccggtg tttggcctgt
541 actcttcatt ttaccccgtt atcatgtatt gtttttttgg aacctccaga cacatatcca
601 tagnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnngtccgtt tgcagttatt
721 agcctgatga taggcggcgt ggctgttcga ttagtaccag atgatatggt cattccagga
781 ggagtaaatg caaccaacgg tacggaggca agagatgctt tgagagtgaa agtcgccatg
841 tctgtgacct tactttcagg aatcattcag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
901 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
961 nnnnnnnnnn ttttgcctag gtgtctgtag gtttggattt gtggccatat atctcacgga
1021 gcccctggtc cgtgggttta ccactgcggc agctgtgcat gtcttcacct ccatgttaaa
1081 atacctgttt ggagttaaaa caaagcggta cagtgggatc ttttcagtgg tgtatnnnnn
1141 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1201 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnagtac agttgctgtg ttgcagaatg
1261 ttaaaaacct caacgtgtgt tccctaggcg ttgggctgat ggtctttggt ttgctgctgg
1321 gtggcaagga gtttaatgag agatttaaag agaaattgcc agcacccatc cctttagagt
1381 tctttgcgnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1441 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnngt ggttatggga
1501 actggcattt cagctgggtt taacctgaat gaatcataca atgtggatgt cgttgggaca
1561 cttcctctgg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1621 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngctgctacc
1681 tccggccaat ccggacacca gcctcttcca ccttgtgtac gtggatgcca ttgccatagc
1741 catcgttgga ttttcagtga ccatctcaat ggccaagacc ttggcaaata agcatggcta
1801 ccaggttgat ggcaatcagn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1861 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnng
1921 agctcattgc cctgggactg tgcaattcca ttggctcact cttccagacg ttttcaattt
1981 catgctcctt gtctcgaagc cttgttcagg agggaactgg agggaagaca cagnnnnnnn
2041 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2101 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnncttgcag gttgtttggc ctcgttaatg
2161 attctgctgg tcatattagc cactggattc ctctttgaat cattacccca gnnnnnnnnn
2221 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn ngctgtgctg tcggccattg tgatcgtcaa
2341 cctgaaagga atgtttatgc aattctcaga tctcccgttt ttctggagaa ccagcaagat
2401 agagctgnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2461 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnacc atctggctta
2521 ccacttttgt ttcctccttg ttcctgggat tggactatgg cttgattact gctgtgatca
2581 tcgcactgct gactgtgatt tacagaacac agagnnnnnn nnnnnnnnnn nnnnnnnnnn
2641 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2701 nnnnnnnnnn nnnntccgag ctacaaagtc cttgggcagc ttcctgacac tgatgtgtac
2761 attgacatag acgcgtatga ggagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2821 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2881 nnnngtgaaa gaaattcctg gaataaaaat attccaaata aatgccccaa tttattatgc
2941 aaatagtgac ttatacagca gtgcattaaa aagaaagnnn nnnnnnnnnn nnnnnnnnnn
3001 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3061 nnnnnnnnnn nnnnnnnact ggagtgaacc cagccctcat aatgggagca agaagaaagg
3121 ccatgaagaa gtatgctaag gaagttggaa atgccaacat ggccaatgca accatcgtca
3181 aagtgnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3241 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnngatgc agaagtagat
3301 ggagaagacg gcaccaagcc tgaggaagag gagaatgaaa taaaatatcc cccagtagtc
3361 atcaagagca cacttcctga ggaactgcaa agatttatgc ccccagggga taacgtccac
3421 accatcattc tggattttac gcaagtcaat tttattgatt ccgttggtgt aaaaactctg
3481 gcagggnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3541 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnattg taaaagaata
3601 tggagatgtc ggcatttatg tgtatttagc aggatgcagt gnnnnnnnnn nnnnnnnnnn
3661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
3721 nnnnnnnnnn nnnnnnnnnn ncacaagtcg tgaatgacct cagtcgaaat caattctttg
3781 aaaatcctgc cttactggag ctgctgttcc acagcattca cgacgcagtc ttaggcagcc
3841 aagttcgaga ggcacttgcc gaacaggagg ccacggctgc ccctccccag gaggactctg
3901 agcccaacgc cactccggag gcttag
//