LOCUS HM769858 2071 bp DNA linear MAM 12-DEC-2011
DEFINITION Bubalus bubalis S100A8 protein gene, complete cds.
ACCESSION HM769858
VERSION HM769858.1
KEYWORDS .
SOURCE Bubalus bubalis (water buffalo)
ORGANISM Bubalus bubalis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
Pecora; Bovidae; Bovinae; Bubalus.
REFERENCE 1 (bases 1 to 2071)
AUTHORS Kathiravan,P., Goyal,S., Kataria,R.S., Mishra,B.P., Jayakumar,S.
and Joshi,B.K.
TITLE Sequence characterization of S100A8 gene reveals structural
differences of protein and transcriptional factor binding sites in
water buffalo and yak
JOURNAL Anim. Biotechnol. 22 (3), 124-132 (2011)
PUBMED 21774620
REFERENCE 2 (bases 1 to 2071)
AUTHORS Kathiravan,P., Goyal,S., Mishra,B.P. and Kataria,R.S.
TITLE Direct Submission
JOURNAL Submitted (14-JUL-2010) DNA Fingerprinting Unit, National Bureau of
Animal Genetic Resources, PB. No.129, GT Road Bypass, Karnal,
Haryana 132001, India
FEATURES Location/Qualifiers
source 1..2071
/organism="Bubalus bubalis"
/mol_type="genomic DNA"
/db_xref="taxon:89462"
/note="Swamp Buffalo"
regulatory 937..941
/regulatory_class="CAAT_signal"
regulatory 979..983
/regulatory_class="TATA_box"
mRNA join(1006..1041,1476..1636,1788..>1916)
/product="S100A8 protein"
5'UTR join(1006..1041,1476..1495)
exon 1006..1041
/number=1
exon 1476..1636
/number=2
CDS join(1496..1636,1788..1916)
/codon_start=1
/product="S100A8 protein"
/protein_id="ADM13375.1"
/translation="MLTDLESAINCLIDVYHKYSLNQGNYHAVYRDDLKKLLETECPK
FMKKKDADTWFKELDINQDGGINLEEFLVLVIKVGLVAHEEIHKE"
exon 1788..>1916
/number=3
BASE COUNT 475 a 538 c 556 g 501 t
ORIGIN
1 ggcatgttct gagggtctga acagtttaca cgaatgtcaa gtactctgta caagagaaat
61 gatcacaaat cttcagcact ggaacccagg ttggggggaa ggactcgctc cttctgaaat
121 cctgggggaa tcgcccacct cctcttctcc tcctagggtt gaaacatttc tgccttctcc
181 aaaagtgccc tccttcccca cccccacaga gttgttttcc tctatagccc agactcttgg
241 ggtcacaggc acataatcac cccagagagg atagaagggt ccctgctgtt tatgcagcgg
301 ctcagtgcct catgctcgta gggggtcccc aagccagcgt ccatctcctt ggacacagtg
361 ctgcccaccc cagcctcaca gaacagaggt gctgtgaagg tgtggggaca gcagcagaga
421 aatggactta acccttagca gcccacatcc ccactgagtc cagccacaca cataacaata
481 ataatggaaa tactccacct tctgttacta aaaatccagc aactaggaca agtgttctta
541 accttttaga ggcctttgga cccttttgac aatgtgatga atgctgtgga ggaatgagct
601 tatttgcatg cacttaaaat gaggcattca acttcagttc tatttccgag atgcatagag
661 aagccatgca aataaccaca gcaacagtgg gaaggactta ggagtgagct tccatggttg
721 gccatgccag gggacgctag cagcccacag gcagaatctt taccatgccc tcttcctggt
781 ttctcctcct gggcatcact gcctggcact tgccttcctc cttctacctt tcctgtgctc
841 cccctcagga cttttcattc tgcacggtga ttgccccatt ttccttgttg ggaaacttga
901 ggctgtagca acactggaag ggagtagctg cctctgagtg gcccgaggcc ctgggcagct
961 ggccaatcct ggttgctata aaagggagcc gacactgagc cctgcatgtc ttttggcaac
1021 tctgttttgg ggagacctgg taagtggaac tgtggtctgt ccgtcactga gggctgcccc
1081 tggggtgggc tgaggagtgc agcagccttc tcagaggagg ggagagaaag ctcgctggta
1141 tctggacagg gtccagaaga acatgagcct ggggttgaag aaggggccga gggctctagg
1201 acttttgagt gagggcacgt ttgggcccct cctgggcaga ggatgaggcc atggggagag
1261 ctggcaggca ctgtgtgtgc ttgggtaccc tgcttcctcc cacaccctca tctacatcac
1321 cccacccctt ccccttgtag ccatagccct ctgctggcta gctacttgga tggtgtcatc
1381 caaggcaaag ccatcccctg gggtaggagc ttcctgagtg tccccacagg caccttcccc
1441 acttcgggct tagccgggtg ctccgtcttc caggtggggc aaatccttgg acaccatgct
1501 gacggatctg gagagtgcca ttaactgcct gattgatgtc taccacaagt actccctgaa
1561 tcaagggaat taccatgccg tctataggga tgacttgaag aaactgttag agacagagtg
1621 tcctaagttt atgaaggtga ggagggactg ggtgtggttt ggggttctcg gcctggatct
1681 gatgaagccc tgggtcattg atcacctgcg ttgctccaaa cagacagcca tgcctcagct
1741 tccctgagat ctttaccctc tgacctctct ttctccaatc ttcacagaaa aaggatgcgg
1801 acacttggtt caaagagttg gacatcaatc aggatggtgg aattaatttg gaggagttcc
1861 tcgtgctggt gataaaagtg ggcctggtag cccatgaaga aattcacaaa gaatagcaga
1921 gctattgggc ctggggctag gccactggac tcntccctgc agagtaataa aatagttgat
1981 acctcaggtc tctcctgatt gcgctttctg tttgtggaat gaggctcctg tgggggtgga
2041 gggagggttg gaaaacccaa aggaagagaa a
//