LOCUS       GU576455                1022 bp    DNA     linear   PRI 27-MAR-2010
DEFINITION  Macaca fascicularis isolate Nc00139 MHC class I antigen (Mafa-A2)
            gene, Mafa-A2*05 variant allele, exons 2 through 4 and partial cds.
ACCESSION   GU576455
VERSION     GU576455.1
KEYWORDS    .
SOURCE      Macaca fascicularis (crab-eating macaque)
  ORGANISM  Macaca fascicularis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
REFERENCE   1  (bases 1 to 1022)
  AUTHORS   Wu,J., Bassinger,S., Tsewang,T.D., Krencicki,M.A. Jr., Woods,J.B.
            and Williams,T.M.
  TITLE     Primate (Mamu and Mafa) MHC class I allele exon 2, 3, and 4
            sequences
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1022)
  AUTHORS   Wu,J., Bassinger,S., Tsewang,T.D., Krencicki,M.A. Jr., Woods,J.B.
            and Williams,T.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (29-JAN-2010) Pathology, University of New Mexico,
            MSC08-4640, BMSB 315, 1 University of New Mexico, Albuquerque, NM
            87131, USA
FEATURES             Location/Qualifiers
     source          1..1022
                     /organism="Macaca fascicularis"
                     /mol_type="genomic DNA"
                     /isolate="Nc00139"
                     /db_xref="taxon:9541"
     gene            <1..>1022
                     /gene="Mafa-A2"
                     /allele="Mafa-A2*05 variant"
     mRNA            join(<1..270,371..646,747..>1022)
                     /gene="Mafa-A2"
                     /allele="Mafa-A2*05 variant"
                     /product="MHC class I antigen"
     CDS             join(<1..270,371..646,747..>1022)
                     /gene="Mafa-A2"
                     /allele="Mafa-A2*05 variant"
                     /codon_start=3
                     /product="MHC class I antigen"
                     /protein_id="ADD92159.1"
                     /translation="SHSLRYFYTSMSRPGSGQPRFISVGYVDDTQFVRFDSDAESPRE
                     EPRAPWMEQEGPEYWDRETRICKADTQTLRENLRTLLRYYNQSEARSHTIQTMYGCDL
                     GPDGRLLRGYDQSAYDGRDYIALNEDLRSWTAADMAAQNTQRKWEAAGVAEQHRTYLQ
                     GECLEWLRRHLENGKETLQRADSPKTHVTHHPVSDHEATLRCWALGFYPAEITLTWRR
                     DGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGKEQRYTCHVQHEGLPEPLTLRW"
     exon            1..270
                     /gene="Mafa-A2"
                     /allele="Mafa-A2*05 variant"
                     /number=2
     gap             271..370
                     /estimated_length=unknown
     exon            371..646
                     /gene="Mafa-A2"
                     /allele="Mafa-A2*05 variant"
                     /number=3
     gap             647..746
                     /estimated_length=unknown
     exon            747..1022
                     /gene="Mafa-A2"
                     /allele="Mafa-A2*05 variant"
                     /number=4
BASE COUNT          168 a          256 c          280 g          118 t
ORIGIN      
        1 gctcgcactc cttgagatat ttctacacct ccatgtcccg gcccggcagc gggcagcccc
       61 gcttcatctc cgtgggctac gtggacgaca cgcagttcgt gcggttcgac agcgacgccg
      121 agagtccgag agaggagccg cgggcgccgt ggatggagca ggaggggccg gagtattggg
      181 accgggagac acggatctgc aaggccgaca cacagactct ccgagagaac ctgcggaccc
      241 tgctccgcta ctacaaccag agcgaggcca nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      361 nnnnnnnnnn ggtctcacac catccagacg atgtacggct gcgacttggg gccggacggg
      421 cgcctcctcc gcgggtatga ccagtccgcc tacgacggca gggattacat cgccctgaac
      481 gaggacctgc gctcctggac cgcggcggac atggcggctc agaacaccca gcggaagtgg
      541 gaggcggcgg gtgtggcgga gcagcacaga acctacctgc agggcgagtg cctggagtgg
      601 ctccgcagac acctggagaa cgggaaggag acgctgcagc gcgcggnnnn nnnnnnnnnn
      661 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      721 nnnnnnnnnn nnnnnnnnnn nnnnnnactc ccccaagaca catgtaaccc accaccccgt
      781 ctctgaccat gaggccaccc tgaggtgctg ggccctgggc ttctaccctg cggagatcac
      841 actgacctgg cggcgggatg gggaggacca aactcaggac acggagctcg tggagaccag
      901 gcctgcagga gatggaacct tccagaagtg ggcggctgtg gtggtgcctt ctggaaagga
      961 gcagagatac acctgtcatg tgcagcatga gggtctgccc gagcccctca ccctgagatg
     1021 gg
//