LOCUS       GQ470394                 646 bp    DNA     linear   PRI 24-JUL-2016
DEFINITION  Pan troglodytes MHC class I antigen (Patr-B) gene, Patr-B*0102 new
            allele, exons 2, 3 and partial cds.
ACCESSION   GQ470394
VERSION     GQ470394.1
KEYWORDS    .
SOURCE      Pan troglodytes (chimpanzee)
  ORGANISM  Pan troglodytes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Pan.
REFERENCE   1  (bases 1 to 646)
  AUTHORS   Caggiari,L., De Zorzi,M., Rehermann,B. and De Re,V.
  TITLE     Identification of a new Patr-B*01 variant, Patr-B*0102, by
            sequence-based typing in a chimpanzee (Pan troglodytes)
  JOURNAL   Tissue Antigens (2009) In press
   PUBMED   19958469
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 646)
  AUTHORS   De Re,V., Caggiari,L., De Zorzi,M. and Rehermann,B.
  TITLE     Direct Submission
  JOURNAL   Submitted (10-AUG-2009) FSC, CRO, F. Gallini, 2, Aviano, PN 33081,
            Italy
FEATURES             Location/Qualifiers
     source          1..646
                     /organism="Pan troglodytes"
                     /mol_type="genomic DNA"
                     /db_xref="taxon:9598"
                     /note="PCR_primers=fwd_name: LH5BIN1, rev_name: RH3BIN"
     gene            <1..>646
                     /gene="Patr-B"
                     /allele="Patr-B*0102 new"
     mRNA            join(<1..270,371..>646)
                     /gene="Patr-B"
                     /allele="Patr-B*0102 new"
                     /product="MHC class I antigen"
     CDS             join(<1..270,371..>646)
                     /gene="Patr-B"
                     /allele="Patr-B*0102 new"
                     /codon_start=3
                     /product="MHC class I antigen"
                     /protein_id="ACV87326.1"
                     /translation="SHSMRYFYTSVSRPGRGEPRFITVGYVDDTQFVRFDSDAASPRM
                     EPRAPWIEQEGSEYWDRETRNMKASAQTDRENLRIALRYYNQSEAGSHTWQTMYGCDM
                     GPDGRLLRGYGQYAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAAREAEQRRAYLE
                     GTCVEWLRRYLENGKETLQRA"
     exon            1..270
                     /gene="Patr-B"
                     /allele="Patr-B*0102 new"
                     /number=2
     gap             271..370
                     /estimated_length=unknown
     exon            371..646
                     /gene="Patr-B"
                     /allele="Patr-B*0102 new"
                     /number=3
BASE COUNT          110 a          169 c          194 g           73 t
ORIGIN      
        1 gctcccactc catgaggtat ttctacacct ccgtgtcccg gcccggccgc ggggagcccc
       61 gcttcatcac cgtgggctac gtggacgaca cccagttcgt gaggttcgac agcgacgccg
      121 cgagtccgag gatggagccc cgggcgccat ggatagagca ggaggggtca gagtattggg
      181 accgggagac acggaatatg aaggcctccg cacagactga ccgagagaac ctgcggatcg
      241 cgctccgcta ctacaaccag agcgaggccg nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      301 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
      361 nnnnnnnnnn ggtctcacac ctggcagacg atgtatggct gcgacatggg gccggacggg
      421 cgcctcctcc gcgggtatgg ccagtacgcc tacgacggca aggattacat cgccctgaac
      481 gaggacctga gctcctggac cgcggcggac accgcggctc agatcaccca gcgcaagtgg
      541 gaggcggccc gtgaggcgga gcagcggaga gcctacctgg agggcacgtg cgtggagtgg
      601 ctccgcagat acctggagaa cgggaaggag acgctgcagc gcgcgg
//