LOCUS GQ411543 2711 bp DNA linear PRI 19-SEP-2009
DEFINITION Macaca fascicularis MHC class I antigen (Mafa-B) gene, Mafa-B*01
allele, complete cds.
ACCESSION GQ411543
VERSION GQ411543.1
KEYWORDS .
SOURCE Macaca fascicularis (crab-eating macaque)
ORGANISM Macaca fascicularis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
REFERENCE 1 (bases 1 to 2711)
AUTHORS Zheng,Y. and Jiang,Q.
TITLE Identification of MHC-B alleles in Chinese cynomolgus macaque
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 2711)
AUTHORS Zheng,Y., Jiang,Q. and Zhuo,M.
TITLE Direct Submission
JOURNAL Submitted (17-JUL-2009) Biochemistry and Molecular Biology,
Bioengineering and Bioscience School, South China University of
Technology, Mega Center South China University of Technology B6,
Guangzhou, Guangdong 510006, China
FEATURES Location/Qualifiers
source 1..2711
/organism="Macaca fascicularis"
/mol_type="genomic DNA"
/db_xref="taxon:9541"
/chromosome="6"
/PCR_primers="fwd_seq: tcctgagacgccgagatg, rev_seq:
tagaccccaagaatctcacct"
gene <16..>2688
/gene="Mafa-B"
/allele="Mafa-B*01"
mRNA join(<16..88,218..487,733..1008,1583..1858,1963..2067,
2507..2539,2645..>2688)
/gene="Mafa-B"
/allele="Mafa-B*01"
/product="MHC class I antigen"
CDS join(16..88,218..487,733..1008,1583..1858,1963..2067,
2507..2539,2645..2688)
/gene="Mafa-B"
/allele="Mafa-B*01"
/note="alpha chain"
/codon_start=1
/product="MHC class I antigen"
/protein_id="ACV74242.1"
/translation="MQVMAPRTLLLLLSGALSLTETWAVSHSMRYFTTAVSRPGRREP
WYLEVGYVDDTQFVRFDSDVESPRMEPRAPWVEQEGPEYWDRNTRRAKGNAQTERGNL
RTLLRYYNQSEGGSHTVQRMYGCDLGPDGRLLRGYHQSAYDGKDYIALNEDLRSWTAA
DMAARFTQRKWEAAREAEQMRAYLEGECLEWLRRHLENGKETLQRADPPKTHVTHHPV
SDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPGGDGTFQKWGAVVVPSG
EEQRYTCHVQHEELPEPLTLRWEPSSQSTIPIMGIVAVLAVVTGAVVAAMMCRRKSSG
GKGGSYFQAASKDSPQGSDESLMA"
BASE COUNT 515 a 795 c 859 g 542 t
ORIGIN
1 tcctgagacg ccgagatgca ggtcatggcg ccccgaaccc tcctcctgct gctctcgggg
61 gccctgtccc tgaccgagac ctgggccggt gagtgcgggg tcgggaggga aatggcctct
121 gcggggagga gcgaggggac cgcaggcgga ggcgcaggac ccgggtagcc gcgcggggag
181 gagggtcggg cgggtctcag cctctcctcg cccccagtct cccactccat gaggtatttc
241 accaccgccg tgtcccggcc cggccgccgg gaaccctggt atctcgaagt cggctacgtg
301 gacgacacgc agttcgtgcg gttcgacagc gacgtcgaga gtccgaggat ggagccgcgg
361 gcgccgtggg tggagcagga ggggccggag tattgggacc ggaacacacg gagagccaag
421 ggcaacgcac agactgagcg agggaacttg cggaccctgc tccgctacta caaccagagc
481 gaggggggtg agtggccccg gcccggggct caggtcacga cccctcccca tcccccacgg
541 acggccaggg tctccctgag tctccgggtc cgagatccgc cccgaggccg cgggacccgc
601 ccagaccctc gaccggggag agccccaggc gcttttaccg ggtttcattt tcagttgagg
661 ccaaaatccc cggggattgg tcgggccggg gcgggactcg gcgggcgggg ctgaccgcgg
721 gggcggggcc agggtctcac acagtccaga ggatgtacgg ctgcgacctg gggcccgacg
781 ggcgcctcct ccgcgggtat caccagtccg cctacgacgg caaggattac atcgccctga
841 acgaggacct gcgctcctgg accgccgcgg acatggcggc tcggttcacc cagcgcaagt
901 gggaggcggc ccgcgaggca gagcagatga gagcctacct ggagggcgag tgcctggagt
961 ggctccgcag acacctggag aacgggaagg agacgctgca gcgcgcgggt accggggcag
1021 tggggagact tccccatcac ctctagatcg cccgggatgg ccttccatga ggaggggagg
1081 aaaatgggat cagcgctaga atgtcccctc ccttgaatgg agaatggcat gagttttcct
1141 gagtttcctc tgaagacccc ctctgctctc taggacaatt aagggatgac gtctctgagg
1201 aaatggaggg gaagacagtc cccagaatac tgatcagggg tcccctttat cccctgcagc
1261 agccttggga accgtgaact tttctctcag gccttgttct ctgcctcaca ctcaatgtgt
1321 ctgaaggtct gattccagct tttctgagtc cctcggcctc cactcaggtc aggaccagaa
1381 gtccctgttc ctccctcaga gactagaact ctccaaggaa taagagatta tcccagatgc
1441 ctgtgtccag tctggtgtct ggcttttgtg ctccctcccc cacaccaggt gtcctgtcca
1501 ttctcagggt ggtcacatgc gtcctggtgg gatatcgcat gagagatgca aagcgcctga
1561 attttctggc tcttcccatc agatccccca aagacacacg tgacccacca ccccgtctct
1621 gaccatgagg ccaccctgag gtgctgggct ctgggcttct accctgcgga gatcacgctg
1681 acctggcagc gggatgggga ggatcaaact caggacaccg aacttgtgga gaccaggcca
1741 ggaggagatg gaaccttcca aaagtgggga gctgtggtgg tgccttctgg agaagagcag
1801 agatacacat gccacgtaca gcacgaggaa ttgccggagc ccctcaccct gagatggggt
1861 aaggaggggg atgaggggtc atgtctcttc tcagggaaag caggagccct tctggagccc
1921 ttcagcaggg tcagggcccc tcaccttccc ctcctttccc agagccatct tcccagtcca
1981 ccatccccat catgggcatt gttgctgtcc tagcagttgt caccggagct gtggtcgctg
2041 ctatgatgtg caggaggaag agctcaggta gggaaggggt gaggggtggg gtctgggttt
2101 tcttgtccca ctgggggttt caagcccaag gtagaagtgt tccctgcctc attcctggga
2161 agcagcatcc acacagggtc taacccagcc tgggaccctg tgtgccagca cttactctct
2221 tgtgtagcac atgtgacagt gaaggaggat gtatcacctt gatgattatg gtattgggtc
2281 ctgattccag cattcgtgag tcaagggaag gtccctacta aggacagacc ttgggagggc
2341 agtttgtcca ggacacacag ctgctttcct cctgttccct gatcctgccc tgggtctgta
2401 gtcatagttc tggaaatttc tcttgggtcc aagactagga ggttcctcta agatcttatg
2461 gccttgcttc ctcccagccc gctcacagga cattttcttc ccacaggtgg aaaaggaggg
2521 agctactttc aggctgcgtg taagtggtgg gggtgggagt gtggaggagc tcacccaccc
2581 cataattcct cctgtccatg tctcctgcgg gctctgacca ggtcctgttt ttgttctacc
2641 ccagccaagg acagtcccca gggctctgat gagtctctca tggcttgaaa aggtgagatt
2701 cttggggtct a
//