LOCUS FS639971 447 bp mRNA linear EST 04-FEB-2010 DEFINITION Sus scrofa mRNA, clone:ADR010001E05, 5' end, expressed in adrenal gland. ACCESSION FS639971 VERSION FS639971.1 KEYWORDS EST; 5'-end sequence (5'-EST). SOURCE Sus scrofa (pig) ORGANISM Sus scrofa Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus. REFERENCE 1 (bases 1 to 447) AUTHORS Uenishi,H., Morozumi,T., Toki,D., Eguchi-Ogawa,T. and Tanaka-Matsuda,M. TITLE Direct Submission JOURNAL Submitted (01-FEB-2010) to the DDBJ/EMBL/GenBank databases. Contact:Hirohide Uenishi National Institute of Agrobiological Sciences, Animal Genome Research Unit, Division of Animal Sciences; 2 Ikenodai, Tsukuba, Ibaraki 305-8602, Japan E-mail :huenishi@affrc.go.jp REFERENCE 2 AUTHORS Uenishi,H., Morozumi,T., Toki,D., Eguchi-Ogawa,T. and Tanaka-Matsuda,M. TITLE Porcine ESTs using full-length-enriched cDNA libraries JOURNAL Published Only in Database(2010) REFERENCE 3 AUTHORS Uenishi,H., Eguchi,T., Suzuki,K., Sawazaki,T., Toki,D., Shinkai,H., Okumura,N., Hamasima,N. and Awata,T. TITLE PEDE (Pig EST Data Explorer): Construction of a database for ESTs derived from porcine full-length cDNA libraries JOURNAL Nucleic Acids Res. 32, D484-D488 (2004) REFERENCE 4 AUTHORS Uenishi,H., Eguchi-Ogawa,T., Shinkai,H., Okumura,N., Suzuki,K., Toki,D., Hamasima,N. and Awata,T. TITLE PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences JOURNAL Nucleic Acids Res. 35, D650-D653 (2007) COMMENT EST project with full-length enriched cDNA libraries carried out in Animal Genome Research Program (Japan) by National Institute of Agrobiological Sciences and STAFF-Institute Single pass sequencing of clones full-length-enriched cDNA library Basecalling was conducted by phred version 0.020425.c Vector sequences were eliminated by RepeatMasker version open-3.2.7 and crossmatch version 0.990319 Low quality bases were trimmed based on the quality values FEATURES Location/Qualifiers source 1..447 /clone="ADR010001E05" /clone_lib="full-length enriched swine cDNA library" /db_xref="taxon:9823" /dev_stage="adult" /mol_type="mRNA" /organism="Sus scrofa" /tissue_type="adrenal gland" BASE COUNT 120 a 112 c 127 g 88 t ORIGIN 1 tactgggaga tgtaccttgc caagtttgcc gccaagggcg agggccagtt ggggcctgct 61 gagcgggcca agaaggtgga ggacatgatg aaaaagctat ggggagaccg gtactttgat 121 ccagccaatg gtaaattcag caagtcagcc accagccctg atggcaagaa gctgccgagg 181 accttctgcc agctcatctt ggaccctatc ttcaaggtgt ttgatgccat catgaatttc 241 aagaaagagg agacagcaaa actgattgaa aaactataca tcaaattgga cagtgaagat 301 aaggacaaag aaggcaaacc actgctgaag gctgtgatgc gccgctggct gcccgccggg 361 gatgcgctgc tacagatgat caccatccac ttgccctccc ccgtgacggc ccataagtac 421 cgctgtgagc tcctgtatga ggggcct //