LOCUS       FR720313                5142 bp    DNA     circular VRL 12-NOV-2010
DEFINITION  BK polyomavirus complete genome, isolate RU7.
ACCESSION   FR720313
VERSION     FR720313.1
KEYWORDS    complete genome.
SOURCE      Human polyomavirus 1
  ORGANISM  Human polyomavirus 1
            Viruses; Polyomaviridae; Betapolyomavirus.
REFERENCE   1  (bases 1 to 5142)
  AUTHORS   Shevtsov A.
  JOURNAL   Submitted (05-NOV-2010) to the INSDC. Shevtsov A., National
            Scientific Laboratory of Collective Use, National Center for
            Biotechnology of Republic of Kazakhstan, Valikhanov str., 13/1,
            Astana 010000, Republic of Kazakhstan.
REFERENCE   2
  AUTHORS   Shevtsov A., Seydalina A., Gribanov O., Gorbatenko E.,
            Momynaliev K.
  TITLE     BK polyomavirus DNA, complete genome, isolate RU7
  JOURNAL   Unpublished.
FEATURES             Location/Qualifiers
     source          1..5142
                     /organism="Human polyomavirus 1"
                     /mol_type="genomic DNA"
                     /country="Russia"
                     /db_xref="taxon:1891762"
     CDS             268..468
                     /product="agnoprotein"
                     /db_xref="GOA:Q65614"
                     /db_xref="InterPro:IPR002643"
                     /db_xref="UniProtKB/TrEMBL:Q65614"
                     /protein_id="CBX88299.1"
                     /translation="MVLRQLSRQASVKLGKTWTGTKKRAQRIFIFILELLLEFCRGED
                     SVDGKNKSTTALPAVKDSVKDS"
     CDS             504..1559
                     /product="VP2"
                     /db_xref="GOA:Q068X9"
                     /db_xref="InterPro:IPR001070"
                     /db_xref="UniProtKB/TrEMBL:Q068X9"
                     /protein_id="CBX88300.1"
                     /translation="MGAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEVQIAS
                     LATVEGITSTSEAIAAIGLTPQTYAVIAGAPGAIAGFAALIQTVTGISSLAQVGYRFF
                     SDWDHKVSTVGLYQQSGMALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFAT
                     ISQALWHVIRDDIPAITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQEY
                     YSDLSPIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQTVHSGEFI
                     EKTIAPGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNKKKRRVSRGSSQKAKGT
                     RASAKTANKRRSRSSRS"
     CDS             861..1559
                     /product="VP3"
                     /db_xref="GOA:Q068X8"
                     /db_xref="InterPro:IPR001070"
                     /db_xref="UniProtKB/TrEMBL:Q068X8"
                     /protein_id="CBX88301.1"
                     /translation="MALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFATISQ
                     ALWHVIRDDIPAITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQEYYSD
                     LSPIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQTVHSGEFIEKT
                     IAPGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNKKKRRVSRGSSQKAKGTRAS
                     AKTANKRRSRSSRS"
     CDS             1444..2532
                     /product="VP1"
                     /db_xref="GOA:E5BBC3"
                     /db_xref="InterPro:IPR000662"
                     /db_xref="InterPro:IPR011222"
                     /db_xref="InterPro:IPR036931"
                     /db_xref="UniProtKB/TrEMBL:E5BBC3"
                     /protein_id="CBX88302.1"
                     /translation="MAPTKRKGECPGAAPKKPKEPVQVPKLLIKGGVEVLEVKTGLDA
                     ITEVECFLNPEMGDPDENLRGFSLKLSAENDFSSDSPERKMLPCYSTARIPLPNLNED
                     LTCGNLLMWEAVTVQTEVIGITSMLNLHAGSQKVHEHGGGKPIQGSNFHFFAVGGDPL
                     EMQGVLMNYRTKYPEGTITPKNPTAQSQVMNTDHKAYLDKNNAYPVECWIPDPTRNEN
                     TRYFGTFTGGENVPPVLHITNTATTVLLDEQGVGPLCKADSLYVSAADICGLFTNSSG
                     TQQWRGLARYFKIRLRKRSVKNPYPISFLLSDLINRRTQRVDGQPMYGMESQVEEVRV
                     FDGTEKLPGDPDMIRYIDKQGQLQTKML"
     CDS             complement(join(2602..4446,4791..5033))
                     /product="large T antigen"
                     /db_xref="GOA:Q0PCN5"
                     /db_xref="InterPro:IPR001623"
                     /db_xref="InterPro:IPR003133"
                     /db_xref="InterPro:IPR010932"
                     /db_xref="InterPro:IPR014015"
                     /db_xref="InterPro:IPR016392"
                     /db_xref="InterPro:IPR017910"
                     /db_xref="InterPro:IPR027417"
                     /db_xref="InterPro:IPR036869"
                     /db_xref="UniProtKB/TrEMBL:Q0PCN5"
                     /protein_id="CBX88303.1"
                     /translation="MDKVLNREESMELMDLLGLERAAWGNLPLMRKAYLRKCKEFHPD
                     KGGDEDKMKRMNTLYKKMEQDVKVAHQPDFGTWSSSEVPTYGTEEWESWWSSFNEKWD
                     EDLFCHEDMFASDEEATADSQHSTPPKKKRKVEDPKDFPSDLHQFLSQAVFSNRTLAC
                     FAVYTTKEKAQILYKKLMEKYSVTFISRHMCAGHNIIFFLTPHRHRVSAINNFCQKLC
                     TFSFLICKGVNKEYLLYSALTRDPYHTIEESIQGGLKEHDFNPEEPEETKQVSWKLIT
                     EYAVETKCEDVFLLLGMYLEFQYNVEECKKCQKKDQPYHFKYHEKHFANATIFAESKN
                     QKSICQQAVDTVLAKKRVDSLHMTREEMLTERFNHILDKMDLIFGAHGNAVLEQYMAG
                     VAWLHCLLPKMDSVIFDFLHCIVFNVPKRRYWLFKGPIDSGKTTLAAGLLDLCGGKAL
                     NVNLPMERLTFELGVAIDQYMVVFEDVKGTGAESKDLPSGHGINNLDSLRDYLDGSVK
                     VNLEKKHLNKRTQIFPPGLVTMNEYPVPKTLQARFVRQIDFRPKIYLRKSLQNSEFLL
                     EKRILQSGMTLLLLLIWFRPVADFATDIQSRIVEWKERLDSEISMYTFSRMKYNICMG
                     KCILDITREEDSETEDSGHGSSTESQSQCSSQVSDTSAPAEDSQRSDPHSQELHLCKG
                     FQCFKRPKTPPPK"
     CDS             complement(4515..5033)
                     /product="small T antigen"
                     /db_xref="InterPro:IPR001623"
                     /db_xref="InterPro:IPR003354"
                     /db_xref="InterPro:IPR036092"
                     /db_xref="InterPro:IPR036869"
                     /db_xref="UniProtKB/TrEMBL:Q3C215"
                     /protein_id="CBX88304.1"
                     /translation="MDKVLNREESMELMDLLGLERAAWGNLPLMRKAYLRKCKEFHPD
                     KGGDEDKMKRMNTLYKKMEQDVKVAHQPDFGTWSSSEVCADFPLCPDTLYCKEWPICS
                     KKPSVHCPCMLCQLRLRHLNRKFLRKEPLVWIDCYCIDCFTQWFGLDLTEETLQWWVQ
                     IIGETPFRDLKL"
BASE COUNT         1552 a         1014 c         1002 g         1574 t
ORIGIN      
        1 gcctcggcct cttatatatt ataaaaaaaa aggccacagg gaggagctgc ttacccatgg
       61 aatgcagcca aaccatgacc tcaggaagga aagtgcatga ctgggcagcc agccagtggc
      121 agttaatagt gaaaccccgc ccctgaaatt ctcaaataaa cacaagagga agtggaaact
      181 ggccaaagga gtggaaagca gccagacaga catgttttgc gggcctagga atcttggcct
      241 tgtccccagt taaactggac aaaggccatg gttctgcgcc agctgtcacg acaagcttct
      301 gtgaaacttg gtaaaacctg gactggaaca aaaaaaagag ctcagaggat ttttattttt
      361 attttagagc ttttgctgga attttgtaga ggtgaagaca gtgtagacgg gaaaaacaaa
      421 agtaccactg ctttacctgc tgtaaaagac tctgtaaaag actcctaggt aagtaatccc
      481 tttttttttg tatttccagg ttgatgggtg ctgctctagc acttttgggg gacctagttg
      541 ccagtgtatc tgaggctgct gctgccacag gattttcagt ggctgaaatt gctgctgggg
      601 aggctgctgc tgctatagaa gttcaaattg catcccttgc tactgtagag ggcataacaa
      661 gtacctcaga ggctatagct gctataggcc taactcctca aacatatgct gtaattgctg
      721 gtgctcctgg ggctattgct gggtttgctg ctttaattca aactgttact ggtattagtt
      781 ccttggctca agtagggtat aggtttttta gtgattggga tcacaaagtt tccactgtag
      841 gcctctatca gcaatcaggc atggctttgg aattgtttaa cccagatgag tactatgata
      901 tattgtttcc tggtgtaaat acttttgtaa ataatattca ataccttgat cctaggcatt
      961 ggggtccttc tttgtttgct actatttctc aggctttgtg gcatgttatt agggatgata
     1021 tacctgctat aacctcacaa gaattgcaaa gaagaacaga aagatttttt agagactcct
     1081 tggctagatt tttggaggaa actacctgga caattgtaaa tgcccctata aacttttata
     1141 attatattca agaatattat tctgatcttt cccctattag gccctcaatg gttagacaag
     1201 tagctgaaag ggaaggtacc cgtgtacatt ttggccatac ttatagtata gatgatgctg
     1261 acagtataga agaagttaca caaagaatgg acttaagaaa tcaacaaact gtacattcag
     1321 gagagtttat agaaaaaact attgccccag gaggtgctaa tcaaagaact gctcctcaat
     1381 ggatgttgcc tttacttcta ggcctgtacg ggactgtaac acctgctctt gaagcatatg
     1441 aagatggccc caacaaaaag aaaaggagag tgtccagggg cagctcccaa aaagccaaag
     1501 gaacccgtgc aagtgccaaa actgctaata aaaggaggag tagaagttct agaagttaaa
     1561 actgggctag atgctataac agaggtagaa tgcttcctaa acccagaaat gggggatcca
     1621 gatgaaaacc ttaggggctt tagtctaaag ctaagtgctg aaaatgactt tagcagtgat
     1681 agcccagaaa gaaaaatgct tccctgttac agcacagcaa gaattcccct ccccaattta
     1741 aatgaggacc taacctgtgg aaatctactg atgtgggagg ctgtaacagt acaaacagag
     1801 gtcattggaa taactagcat gcttaacctt catgcagggt cacaaaaagt gcatgagcat
     1861 ggtggaggta aacctattca aggcagtaat ttccactttt ttgctgttgg tggagacccc
     1921 ttggaaatgc agggagtgct aatgaattac aggacaaagt acccagaagg tactataacc
     1981 ccaaaaaacc caacagccca gtcccaagta atgaatactg accataaggc ctatttggac
     2041 aaaaacaatg cttatccagt tgagtgctgg attcctgatc ccaccagaaa tgaaaatact
     2101 aggtattttg ggactttcac aggaggggaa aatgttcctc cagttcttca tataacaaac
     2161 actgctacca cagtgttgct agatgaacag ggtgtggggc ctctttgtaa agctgatagc
     2221 ctgtatgttt cagctgctga tatttgtggc ctgtttacta acagctctgg aacacaacag
     2281 tggagaggcc ttgcaagata ttttaagatt cgcctgagaa aaagatctgt aaaaaatcct
     2341 tacccaattt cctttttgct aagtgacctt ataaacagga gaacccagag agtggatggg
     2401 cagcctatgt atggtatgga atcccaggta gaagaggtta gggtgtttga tggcacagaa
     2461 aaacttccag gggacccaga tatgataaga tatattgaca aacaaggaca attgcaaacc
     2521 aaaatgcttt aaacaggtgc ttttattgtt gatatacatt taataaatgc tgcttttgta
     2581 taagccagtt ttaagcttgt gttattttgg gggtggtgtt ttaggccttt taaaacactg
     2641 aaagccttta cacaaatgca actcttgact atgggggtct gacctttggg aatcttcagc
     2701 aggggctgaa gtatctgaga cttgggaaga gcattgtgat tgggattcag tgcttgatcc
     2761 atgtccagag tcttcagttt ctgaatcttc ttctcttgtg atatcaagaa tacattttcc
     2821 catgcatata ttatatttca tccttgaaaa agtatacata cttatctcag aatccagcct
     2881 ttccttccat tcaacaattc tagattgtat atctgttgca aaatcagcta caggcctaaa
     2941 ccaaattagc agtagcaaca aggtcattcc actttgtaaa attctttttt caagtaagaa
     3001 ctctgagttt tgtaaggatt ttcttaaata tattttgggc ctaaaatcta tctgtcttac
     3061 aaatctagcc tgcagggttt tagggacagg atactcattc attgtaacca ggcctggtgg
     3121 aaatatttgg gttcttttgt ttaaatgttt cttttctaaa ttaaccttaa cacttccatc
     3181 taaataatct ctcaaactgt ctaaattgtt tattccatgt cctgaaggca aatcctttga
     3241 ttcagctcct gttcctttta catcttcaaa aacaaccatg tactgatcta tagctacacc
     3301 tagttcaaag gttagccttt ccatgggtag gtttacattt aaagctttac ctccacacaa
     3361 atctaataac cctgcagcta gtgttgtttt tccactatca atgggacctt taaataacca
     3421 gtatcttctt ttaggtacat taaaaacaat acagtgcaaa aaatcaaata taacagaatc
     3481 cattttaggt agcaaacagt gcagccaagc aacacctgcc atatattgtt ctaatacagc
     3541 atttccatga gccccaaata ttaaatccat tttatctaat atatgattaa atctttctgt
     3601 tagcatttct tctctagtca tatgaaggct atctactctt tttttagcta aaactgtatc
     3661 tactgcttgc tgacaaatac ttttttgatt tttactttct gcaaagatag tagcatttgc
     3721 aaaatgcttt tcatgatact taaagtgata aggttggtct tttttctgac actttttaca
     3781 ctcctctaca ttgtattgaa attctaaata catacctaat aataaaaaca catcctcaca
     3841 ctttgtttct actgcatact cagtaattaa tttccaagag acctgctttg tttcttcagg
     3901 ctcttctggg ttaaaatcat gctcctttaa gcccccttga atgctttctt ctattgtatg
     3961 gtatggatct ctagttaagg cactatatag taagtattcc ttattaacac ccttacaaat
     4021 taaaaaacta aaggtacaca gcttttgaca gaaattatta attgcagaaa ctctatgtct
     4081 atgtggagtt aaaaagaata taatattatg cccagcacac atgtgtctac taataaaagt
     4141 tacagaatat ttttccataa gttttttata cagaatttga gctttttctt tagtagtata
     4201 cacagcaaag caggcgaggg ttctattact aaatacagct tgactaagaa actggtgtag
     4261 atcagaagga aagtctttag ggtcttctac ctttcttttt ttcttgggtg gtgttgagtg
     4321 ttgagaatct gctgttgctt cttcatcact ggcaaacata tcttcatggc aaaataaatc
     4381 ttcatcccat ttttcattaa aggaactcca ccaagactcc cactcttctg ttccataggt
     4441 tggcacctat aaaacaaata attacttagg gcctttaaat attttattat ttatctaaat
     4501 ataaggtagt taccttaaag ctttagatct ctgaagggag tttctccaat tatttggacc
     4561 caccattgca gagtttcttc agttaggtct aagccaaacc actgtgtgaa gcagtcaatg
     4621 cagtagcaat ctatccaaac caagggctct tttcttaaaa attttctatt taaatgcctt
     4681 aatctaagct gacatagcat gcaagggcag tgcacagaag gctttttgga acaaataggc
     4741 cattccttgc agtacagggt atctgggcaa agaggaaaat cagcacaaac ctctgagcta
     4801 ctccaggttc caaaatcagg ctgatgagct acctttacat cttgctccat ttttttatat
     4861 aaagtattca ttctcttcat tttatcctcg tcgccccctt tgtcagggtg aaattcctta
     4921 cacttcctta aataggcttt tctcattaag ggaaggtttc cccaggcagc tctttcaagg
     4981 cccaaaaggt ccatgagctc catggattct tccctgttaa gcactttatc catttttgca
     5041 aaaattgcaa aagaataggg atttccccca aatagttttg ctaggcctca gaaaaagcct
     5101 ccacaccctt actacttgag agaaagggtg gaggcagagg cg
//