LOCUS FR682141 4262 bp DNA linear MAM 13-AUG-2010
DEFINITION Sus scrofa partial ESR1 gene for estrogen receptor alpha, isoform
A, exon 1.
ACCESSION FR682141
VERSION FR682141.1
KEYWORDS .
SOURCE Sus scrofa (pig)
ORGANISM Sus scrofa
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae;
Sus.
REFERENCE 1 (bases 1 to 4262)
AUTHORS Ulbrich S.E.
JOURNAL Submitted (12-AUG-2010) to the INSDC. Ulbrich S.E., Physiology
Weihenstephan, Technical University of Munich, Weihenstephaner Berg
3, D-85354 Freising, GERMANY.
REFERENCE 2
AUTHORS Fuerst R.W., Ulbrich S.E.
TITLE Analysis of estrogen receptor alpha expression and methylation
status in male growing piglets
JOURNAL Unpublished.
FEATURES Location/Qualifiers
source 1..4262
/organism="Sus scrofa"
/mol_type="genomic DNA"
/country="Germany:Bavaria"
/sex="male"
/dev_stage="prepubertal piglet"
/db_xref="taxon:9823"
exon 1486..2125
/gene="ESR1"
/number=1
CDS 1708..>2125
/gene="ESR1"
/product="estrogen receptor alpha, isoform A"
/function="steroid hormone receptor"
/db_xref="GOA:D9UC10"
/db_xref="InterPro:IPR001292"
/db_xref="UniProtKB/TrEMBL:D9UC10"
/protein_id="CBW46639.1"
/translation="MTMTLHTKASGMALLHQIQANELEPLNRPQLKIPLERPLGEVYV
DSSKPAVYNYPEGAAYDFNAAAAASAPVYGQSGLAYGPGSEAAAFGANGLGGFQPLNS
VSPSPLVLLHPPPQLSPFLHPHGQQVPYYLENEPSGY"
gap 2264..2383
/estimated_length=120
BASE COUNT 957 a 1054 c 1023 g 1108 t
ORIGIN
1 tccctttctt ggcttacatc tatagttact gatgctgagc tcaattttgc ttcatggtaa
61 atcacaacat ttgcatttat tcccaatggt ctgtctggtt ttataaatat tgggtaaagt
121 gtataattat tagtataaag atatcccaaa atattactct cagtaacagc atccttggca
181 tttatatatg acacaaacat tttgtcaggt attctgtcag atgtttggga tagcaattaa
241 agcaaagtat cagatggctg tatagagttc cttaggctgg ggcaaaggaa gtttattaaa
301 aggtataaac tatccaagat tgcaggtgca aatatattta ccatatcttt ttatatatgc
361 ttatatatac tttacatgct atgtaatata cattattatc tgttatacac acacacatat
421 ataatgtgct tgagcatgtc tagcttttaa ttcagttcag aactttttac tatttctttt
481 ccaatctgaa tatttgattc tgcttatcct agtccaagtg aaccaagaag gtccaattgt
541 aggataaaag aacagacata tatcattgca tttcaaaatg tgtttggtga gaccaacagt
601 gtagatttgg ttaatgagcc gaggttatgc tttttttctg gaaaggtcac atttcatatt
661 cagttttctg aagttttggt tgcataatct gtggaaggct tgaataccca tgtccgccta
721 acgggaggtt tctgtaaatc gtcattcaca ttagaattcc tgatgggagc aagtacagta
781 ctgcggccaa agacaaacag acaagtcggg ctgggggaat ctcagatggt cttggctgga
841 ggggatgact ttgggagaat tttgcagatg aggagaactg agctgggcag cactcccctg
901 actgcaaaac gcagctcttt ctatagtaca ccttgagtct ccgccccctt tcccccagat
961 gcctcttatc tgtcccccga gctgctaaat atagccgtct gcctatgcac ccgcacaccc
1021 cattctatct gccatatctc ggttacagag tggtcctccc cagggtcatt ctctgtacac
1081 actccgtatt tccaacgagg agcgtgaatc caacagagag agagacaaac agagatagat
1141 tggagcctgg cacggggcac ataaggtagc acgttcgaga gagccggccc ctggattagt
1201 cttccgagtt tgttttaaac cccgtcttct ccggaccacc tttaggagat ccctctgcgc
1261 ctccgccctc ctgcagtgaa atgcagcctc tatccagcag cgacaagtaa agtaaagttc
1321 agggaagctg ctctttggga tcgctccaga acgagttgcg cctggagtga tgtttaagcc
1381 aacgtcaggg caaggcaaca gccccctggc cggcttccag caccctttgt aatgcatatg
1441 agctcgggag accggtactt aaagttggag acccgggccc gggagttggc ggagcgcgct
1501 cgcgccgggc tgcacttgct cgcgtccggc cgccccgctc cccgggacgg gccggctccc
1561 ggggcagggc cagagctcgc gtcgcggcgg gacatgcgcc gcgccgcctc taaccgcggg
1621 ctgtgctctt cttccaggtg gccggccggc tgctgagccc tccgccgcgg ggggaaacgg
1681 tttgcgcctt gcccgcggcc actgaccatg accatgaccc tacacaccaa agcgtccggc
1741 atggccctgc tgcaccagat ccaagccaac gagctggagc ccctgaaccg cccgcagctc
1801 aagatccccc tggagcggcc cctgggcgag gtgtacgtgg acagcagcaa gcccgccgtg
1861 tataactacc ccgagggcgc cgcgtacgac ttcaacgccg cggccgccgc ctccgcgccc
1921 gtctacggcc agtcgggcct cgcctacggc ccggggtcgg aggcggcggc gttcggcgcc
1981 aacggcttgg ggggcttcca gccgctcaac agcgtgtctc cgagcccgct ggtgctgctg
2041 cacccgccgc cgcagctctc gcccttcctg cacccccacg gccaacaggt gccctattac
2101 ctggagaatg agccgagcgg ctatgcggtg cgcgaggccg gccctcccgc cttctacagg
2161 tacccgcgcc gcccgccgcg ccacgtcggg gtggccgccg cgcacccggc ggcgggaggg
2221 agcggggggc gaggggccgc gccgccggga gctcgcgggg cccnnnnnnn nnnnnnnnnn
2281 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2341 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnntactctc caccccgcct
2401 actgtctgcg tgagaagcag gtccgaaacc ccgtgtgctt tccaactaaa ccagtattag
2461 aaaaccgtgc aaagcagagg ttatttgtgg ggagaaacgc cccagaccaa ataagcacaa
2521 ggtgctttga gtccctagaa aaggtcccgc tttggctgta ggtgttgggg caggcggagc
2581 tcagagtttt cttttttaca tagtcttatt attttacaaa tttgttttaa cgtgcttgca
2641 aaatttcctt tcacctagaa tttcggattg gctatgtgca cgctgtgccg ctggtgagct
2701 ggtgatggtg atgagggggt gctcatttcc ttgggaagcg gttcctagca gccctttgct
2761 tgtcctccct gtcccacctc cgagggaggc tgtaggactg accgagcgct gctcagatga
2821 gcaagggttg aatgggtctc aaggagtttc tgatttctga gttatctggc ggagtccgtg
2881 tcagagcagc ttgctggcag aagacttctg acagccggag atttataact gtcctgtgag
2941 ttaaaaacat gccacatcga agcacgagtg ttttgaaata cttccctgcc agctaagttt
3001 catttctggc ctgcggggct gagaatgccc tgggagtggt gtgtatgggt tcagcccagt
3061 tctgtgcctt tcattctcag gagaagcaac agatagttag tcgttcagga tagacaggaa
3121 cacttttgtg acttaagagg caagtgtttt ttgtcctatt tttttccccc tagtagaccc
3181 tatactttcc tttgctcctc ttcctcccat tttccctttg acagtttctc ccttctcttc
3241 ctgatggact ttgcagaggg tttaggcagg gggtcctggt gggtacctgc accctaggtg
3301 ctgctggaca gggatagcct gggtggggtt gggaggcctc ccagcaccct ggtggctgga
3361 tgctgggtta ggcactgcct ggctggacac tgctggtgtg tggacgtgcc ctccaccctc
3421 acccagaccc ttctgtattg caagctgtgg gccgtttttc tattcagcat ctatttccag
3481 agatatttat agcagaagaa acgggaggaa ggtgcatcgt ggccctagag aattctggag
3541 gcagccgctg ggggtatctg aacatctgcc acatccttca gccccctcag aggaccttag
3601 aatgtcacac agccaagcag gtccatcctg agttattact taaaacacaa acaatgaaca
3661 aaactttaaa aagttggcct ctatcgaatc attttaactt gttttctgca gggttaaaat
3721 ggaaagagaa aaagaattta ttctgcccgc tttttttaag tgttagaatc aaatatgaca
3781 attaaatcta attcacacaa cattttaaac tccttgatgt gaaggaaggc actgatagga
3841 cgtgaattcc ataaccttat ggtagactcc agaaacagtt ttcttttcca tttaattttc
3901 agttcttttc ttgcaaatta atgccactga atttcaatgg acactaatga gactgcttct
3961 cagtggatta tttactgccc tgctaataat tacaaagtga acatggtcaa ataaagaggg
4021 gaatcacatt ttattcaaaa ttgttcagca tcctggtggc aaataatatc actataacat
4081 gcccatctta aactttctgc attcgatgat attcagatat ttttagaata ataaaaaagt
4141 gatatggaac tttcaactca cccacattgg attctgtgtg gaaattcagt tttagaatga
4201 tcattctcct ttgtagttta tttcccataa catccatcct tcctttcttt tcttttcttt
4261 tc
//