LOCUS       FN821399                 324 bp    DNA     linear   MAM 09-MAY-2010
DEFINITION  Ovis aries partial ovar-DRB1 gene for MHC class II antigen, breed
            Bergamasca, allele Ovar-DRB1*1003, exon 2.
ACCESSION   FN821399
VERSION     FN821399.1
KEYWORDS    .
SOURCE      Ovis aries (sheep)
  ORGANISM  Ovis aries
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Bovidae; Caprinae; Ovis.
REFERENCE   1  (bases 1 to 324)
  AUTHORS   Ballingall K.T.
  JOURNAL   Submitted (28-APR-2010) to the INSDC. Ballingall K.T., Moredun
            Research Institute, Epidemiology and Population Biology, Pentlands
            Science Park, Bush Loan, Penicuik, Midlothian, EH26 0PZ, UNITED
            KINGDOM.
REFERENCE   2
  AUTHORS   Ballingall K.T., Steele P.J., Petrini S., Testa F.
  TITLE     MHC class II DRB1 Diversity in two Italian sheep breeds
  JOURNAL   Unpublished.
FEATURES             Location/Qualifiers
     source          1..324
                     /organism="Ovis aries"
                     /mol_type="genomic DNA"
                     /country="Italy"
                     /PCR_primers="fwd_name: 330, fwd_seq:
                     attagcctcyccccaggagkc, rev_name: 313, rev_seq:
                     acacactgctccacactgg"
                     /note="breed:Bergamasca"
                     /db_xref="taxon:9940"
     intron          <1..34
                     /gene="ovar-DRB1"
                     /allele="Ovar-DRB1*1003"
                     /number=1
     exon            35..304
                     /gene="ovar-DRB1"
                     /allele="Ovar-DRB1*1003"
                     /number=2
     CDS             <35..>304
                     /codon_start=3
                     /gene="ovar-DRB1"
                     /allele="Ovar-DRB1*1003"
                     /product="MHC class II antigen"
                     /function="antigen presentation"
                     /db_xref="GOA:D6CIE8"
                     /db_xref="InterPro:IPR000353"
                     /db_xref="InterPro:IPR011162"
                     /db_xref="InterPro:IPR014745"
                     /db_xref="UniProtKB/TrEMBL:D6CIE8"
                     /protein_id="CBL87992.1"
                     /translation="HFLEYSTSECHFFNGTERVRFLDRYFYNGEEYVRFDSDWGEYRA
                     VAELGRRSAEYWNSQKEILERRRTEVDTYCRHNYGVIESFSVQRR"
     intron          305..>324
                     /gene="ovar-DRB1"
                     /allele="Ovar-DRB1*1003"
                     /number=2
BASE COUNT           67 a           76 c          120 g           61 t
ORIGIN      
        1 cgctcctgtg accagatcta tcccgtctct gcagcacatt tcttggagta ttctacgagc
       61 gagtgtcatt tcttcaacgg gacggagcgg gtgcggttcc tggacagata cttctataat
      121 ggagaagagt acgtgcgctt cgacagcgac tggggcgagt accgagcggt ggccgagctg
      181 gggcggcgga gcgccgagta ctggaacagc cagaaggaga tcctggagcg gaggcggacc
      241 gaggtggaca cgtactgcag acacaactac ggggtcattg agagtttcag tgtgcagcgg
      301 cgaggtgagc gcgggggtgg gcgg
//