LOCUS       CY077097                 890 bp    cRNA    linear   VRL 23-NOV-2010
DEFINITION  Influenza A virus (A/Puerto Rico/8-CIP045_RG83841/1934(H1N1))
            segment 8 sequence.
ACCESSION   CY077097
VERSION     CY077097.1
KEYWORDS    .
SOURCE      Influenza A virus (A/Puerto Rico/8-CIP045_RG83841/1934(H1N1))
  ORGANISM  Influenza A virus (A/Puerto Rico/8-CIP045_RG83841/1934(H1N1))
            Viruses; Riboviria; Orthornavirae; Negarnaviricota;
            Polyploviricotina; Insthoviricetes; Articulavirales;
            Orthomyxoviridae; Alphainfluenzavirus; Alphainfluenzavirus
            influenzae.
REFERENCE   1  (bases 1 to 890)
  AUTHORS   Gack,M.U., Albrecht,R.A., Urano,T., Inn,K.-S., Huang,I.-C.,
            Carnero,E., Farzan,M., Inoue,S., Jung,J.U. and Garcia-Sastre,A.
  TITLE     Influenza A virus NS1 targets the ubiquitin ligase TRIM25 to evade
            recognition by the host viral RNA sensor RIG-I
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 890)
  AUTHORS   Gack,M.U., Albrecht,R.A., Urano,T., Inn,K.-S., Huang,I.-C.,
            Carnero,E., Farzan,M., Inoue,S., Jung,J.U. and Garcia-Sastre,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-NOV-2010) Department of Microbiology, Mount Sinai
            School of Medicine, 1 Gustave L. Levy Pl., New York, NY 10029, USA
FEATURES             Location/Qualifiers
     source          1..890
                     /organism="Influenza A virus (A/Puerto
                     Rico/8-CIP045_RG83841/1934(H1N1))"
                     /mol_type="viral cRNA"
                     /strain="A/Puerto Rico/8-CIP045_RG83841/1934"
                     /serotype="H1N1"
                     /host="Homo sapiens"
                     /db_xref="taxon:929707"
                     /segment="8"
                     /lab_host="MDCK1/E1 passage(s)"
                     /note="Derived from Mount Sinai strain of A/PR/8/34: RG
                     293T rescue"
     misc_feature    1..890
                     /db_xref="IRD:CEIRS-CIP045-RG83841.8"
     gene            27..864
                     /gene="NEP"
                     /gene_synonym="NS2"
     CDS             join(27..56,529..864)
                     /gene="NEP"
                     /gene_synonym="NS2"
                     /note="nonstructural protein 2"
                     /codon_start=1
                     /product="nuclear export protein"
                     /protein_id="ADQ75457.1"
                     /translation="MDPNTVSSFQDILLRMSKMQLESSSGDLNGMITQFESLKLYRDS
                     LGEAVMRMGDLHSLQNRNEKWREQLGQKFEEIRWLIEEVRHKLKITENSFEQITFMQA
                     LHLLLEVEQEIRTFSFQLI"
     gene            27..719
                     /gene="NS1"
     CDS             27..719
                     /gene="NS1"
                     /codon_start=1
                     /product="nonstructural protein 1"
                     /protein_id="ADQ75456.1"
                     /translation="MDPNTVSSFQVDCFLWHVRKRVADQELGDAPFLDRLRADQASLR
                     GRGSTLGLDIETATRAGKQIVERILKEESDEALKMTMASVPASRYLTDMTLEEMSRDW
                     SMLIPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEI
                     SPLPSLPGHTAEDVKNAVGVLIGGLEWNDNTVRVSETLQRFAWRSSNENGRPPLTPKQ
                     KREMAGTIRSEV"
BASE COUNT          280 a          181 c          219 g          210 t
ORIGIN      
        1 agcaaaagca gggtgacaaa gacataatgg atccaaacac tgtgtcaagc tttcaggtag
       61 attgctttct ttggcatgtc cgcaaacgag ttgcagacca agaactaggt gatgccccat
      121 tccttgatcg gcttcgcgca gatcaggcta gcctaagagg aaggggcagc accctcggtc
      181 tggacatcga gacagccaca cgtgctggaa agcagatagt ggagcggatt ctgaaagaag
      241 aatccgatga ggcacttaaa atgaccatgg cctctgtacc tgcgtcgcgt tacctaactg
      301 acatgactct tgaggaaatg tcaagggact ggtccatgct catacccaag cagaaagtgg
      361 caggccctct ttgtatcaga atggaccagg cgatcatgga taagaacatc atactgaaag
      421 cgaacttcag tgtgattttt gaccggctgg agactctaat attgctaagg gctttcaccg
      481 aagagggagc aattgttggc gaaatttcac cattgccttc tcttccagga catactgctg
      541 aggatgtcaa aaatgcagtt ggagtcctca tcgggggact tgaatggaat gataacacag
      601 ttcgagtctc tgaaactcta cagagattcg cttggagaag cagtaatgag aatgggagac
      661 ctccactcac tccaaaacag aaacgagaaa tggcgggaac aattaggtca gaagtttgaa
      721 gaaataagat ggttgattga agaagtgaga cacaaactga agataacaga gaatagtttt
      781 gagcaaataa catttatgca agccttacat ctattgcttg aagtggagca agagataaga
      841 actttctcgt ttcagcttat ttaataataa aaaacaccct tgtttctact
//